RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 CERKLQ49MI3 558 aaPredicted RBP16.48■□□□□ 0.23
USP39-207ENST00000450066 FOXP1Q9H334 677 aaPredicted RBP16.48■□□□□ 0.23
USP39-207ENST00000450066 RTEL1Q9NZ71 1219 aa16.48■□□□□ 0.23
USP39-207ENST00000450066 MYH6P13533 1939 aa16.48■□□□□ 0.23
USP39-207ENST00000450066 GREB1LQ9C091 1923 aaPredicted RBP16.48■□□□□ 0.23
USP39-207ENST00000450066 MPHOSPH10O00566 681 aaKnown RBP16.47■□□□□ 0.23
USP39-207ENST00000450066 WNT10BO00744 389 aa16.47■□□□□ 0.23
USP39-207ENST00000450066 FAM83AQ86UY5 434 aa16.47■□□□□ 0.23
USP39-207ENST00000450066 DPF2Q92785 391 aa16.47■□□□□ 0.23
USP39-207ENST00000450066 SYAP1Q96A49 352 aaPredicted RBP16.47■□□□□ 0.23
USP39-207ENST00000450066 FHDC1Q9C0D6 1143 aaPredicted RBP16.47■□□□□ 0.23
USP39-207ENST00000450066 TMEM63CQ9P1W3 806 aa16.47■□□□□ 0.23
USP39-207ENST00000450066 HERC5Q9UII4 1024 aaKnown RBP16.47■□□□□ 0.23
USP39-207ENST00000450066 KCNJ14Q9UNX9 436 aa16.47■□□□□ 0.23
USP39-207ENST00000450066 CNTNAP1P78357 1384 aa16.47■□□□□ 0.23
USP39-207ENST00000450066 hCG_1642624A0A1W2PR95 340 aa16.47■□□□□ 0.23
USP39-207ENST00000450066 FAM196BA6NMK8 535 aa16.47■□□□□ 0.23
USP39-207ENST00000450066 PARP1P09874 1014 aaKnown RBP16.47■□□□□ 0.23
USP39-207ENST00000450066 SLURP2P0DP57 97 aa16.47■□□□□ 0.23
USP39-207ENST00000450066 SCG2P13521 617 aa16.47■□□□□ 0.23
USP39-207ENST00000450066 CEBPZQ03701 1054 aaKnown RBP16.47■□□□□ 0.23
USP39-207ENST00000450066 PFKFB3Q16875 520 aaPredicted RBP16.47■□□□□ 0.23
USP39-207ENST00000450066 DIS3L2Q8IYB7 885 aaKnown RBP16.47■□□□□ 0.23
USP39-207ENST00000450066 POLR3EQ9NVU0 708 aa16.47■□□□□ 0.23
USP39-207ENST00000450066 CLIP2Q9UDT6 1046 aa16.47■□□□□ 0.23
USP39-207ENST00000450066 GOLGA6L4A6NEF3 574 aa16.46■□□□□ 0.23
USP39-207ENST00000450066 SMARCA1P28370 1054 aa16.46■□□□□ 0.23
USP39-207ENST00000450066 ZSCAN23Q3MJ62 389 aa16.46■□□□□ 0.23
USP39-207ENST00000450066 NOSTRINQ8IVI9 506 aa16.46■□□□□ 0.23
USP39-207ENST00000450066 PHF20Q9BVI0 1012 aa16.46■□□□□ 0.23
USP39-207ENST00000450066 FTOQ9C0B1 505 aaKnown RBP eCLIP16.46■□□□□ 0.23
USP39-207ENST00000450066 VEZTQ9HBM0 779 aa16.46■□□□□ 0.23
USP39-207ENST00000450066 BTBD18B2RXH4 712 aa16.46■□□□□ 0.22
USP39-207ENST00000450066 KLRF2D3W0D1 207 aa16.46■□□□□ 0.22
USP39-207ENST00000450066 NBPF9Q3BBW0 867 aa16.46■□□□□ 0.22
USP39-207ENST00000450066 SHISA4Q96DD7 197 aa16.46■□□□□ 0.22
USP39-207ENST00000450066 SPZ1Q9BXG8 430 aa16.46■□□□□ 0.22
USP39-207ENST00000450066 KANSL2Q9H9L4 492 aa16.46■□□□□ 0.22
USP39-207ENST00000450066 VPS54Q9P1Q0 977 aa16.46■□□□□ 0.22
USP39-207ENST00000450066 MTMR7Q9Y216 660 aa16.46■□□□□ 0.22
USP39-207ENST00000450066 YEATS4O95619 227 aa16.45■□□□□ 0.22
USP39-207ENST00000450066 SNHG28P0DPA3 235 aa16.45■□□□□ 0.22
USP39-207ENST00000450066 PDHBP11177 359 aa16.45■□□□□ 0.22
USP39-207ENST00000450066 NASPP49321 788 aaPredicted RBP16.45■□□□□ 0.22
USP39-207ENST00000450066 GMPSP49915 693 aaPredicted RBP16.45■□□□□ 0.22
USP39-207ENST00000450066 TMEM179Q6ZVK1 233 aa16.45■□□□□ 0.22
USP39-207ENST00000450066 SRCAPQ6ZRS2 3230 aa16.45■□□□□ 0.22
USP39-207ENST00000450066 SHTN1A0MZ66 631 aa16.44■□□□□ 0.22
USP39-207ENST00000450066 USP17L5A8MUK1 530 aa16.44■□□□□ 0.22
USP39-207ENST00000450066 CYTH3O43739 400 aa16.44■□□□□ 0.22
USP39-207ENST00000450066 GOLGA8HP0CJ92 632 aa16.44■□□□□ 0.22
USP39-207ENST00000450066 DEKP35659 375 aaKnown RBP16.44■□□□□ 0.22
USP39-207ENST00000450066 ZNF445P59923 1031 aa16.44■□□□□ 0.22
USP39-207ENST00000450066 ABCB5Q2M3G0 1257 aa16.44■□□□□ 0.22
USP39-207ENST00000450066 SLC35G1Q2M3R5 365 aa16.44■□□□□ 0.22
USP39-207ENST00000450066 USP17L2Q6R6M4 530 aa16.44■□□□□ 0.22
USP39-207ENST00000450066 ARHGAP27Q6ZUM4 889 aa16.44■□□□□ 0.22
USP39-207ENST00000450066 CLEC10AQ8IUN9 316 aa16.44■□□□□ 0.22
USP39-207ENST00000450066 LRRC47Q8N1G4 583 aaKnown RBP16.44■□□□□ 0.22
USP39-207ENST00000450066 LINC00301Q8NCQ3 95 aa16.44■□□□□ 0.22
USP39-207ENST00000450066 MKL1Q969V6 931 aa16.44■□□□□ 0.22
USP39-207ENST00000450066 PGBD1Q96JS3 809 aa16.44■□□□□ 0.22
USP39-207ENST00000450066 SH3GLB2Q9NR46 395 aa16.44■□□□□ 0.22
USP39-207ENST00000450066 NYAP2Q9P242 653 aa16.44■□□□□ 0.22
USP39-207ENST00000450066 LMNB1P20700 586 aa16.44■□□□□ 0.22
USP39-207ENST00000450066 ASPRV1Q53RT3 343 aa16.44■□□□□ 0.22
USP39-207ENST00000450066 ANO1Q5XXA6 986 aa16.44■□□□□ 0.22
USP39-207ENST00000450066 KCNG4Q8TDN1 519 aa16.44■□□□□ 0.22
USP39-207ENST00000450066 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.44■□□□□ 0.22
USP39-207ENST00000450066 ISY1Q9ULR0 285 aaKnown RBP16.44■□□□□ 0.22
USP39-207ENST00000450066 CLIC4Q9Y696 253 aa16.44■□□□□ 0.22
USP39-207ENST00000450066 GJA3Q9Y6H8 435 aa16.44■□□□□ 0.22
USP39-207ENST00000450066 RASGRP2Q7LDG7 609 aa16.43■□□□□ 0.22
USP39-207ENST00000450066 MICALL2Q8IY33 904 aa16.43■□□□□ 0.22
USP39-207ENST00000450066 FAM177A1Q8N128 213 aaPredicted RBP16.43■□□□□ 0.22
USP39-207ENST00000450066 BRMS1Q9HCU9 246 aa16.43■□□□□ 0.22
USP39-207ENST00000450066 CNOT7Q9UIV1 285 aaKnown RBP16.43■□□□□ 0.22
USP39-207ENST00000450066 ZNF541Q9H0D2 1346 aa16.43■□□□□ 0.22
USP39-207ENST00000450066 TBC1D12O60347 775 aa16.42■□□□□ 0.22
USP39-207ENST00000450066 KRT2P35908 639 aa16.42■□□□□ 0.22
USP39-207ENST00000450066 TNNI2P48788 182 aa16.42■□□□□ 0.22
USP39-207ENST00000450066 TPRNQ4KMQ1 711 aa16.42■□□□□ 0.22
USP39-207ENST00000450066 RBM26Q5T8P6 1007 aaKnown RBP16.42■□□□□ 0.22
USP39-207ENST00000450066 TMEM39BQ9GZU3 492 aa16.42■□□□□ 0.22
USP39-207ENST00000450066 BAZ2BQ9UIF8 2168 aaKnown RBP16.42■□□□□ 0.22
USP39-207ENST00000450066 FSD2A1L4K1 749 aa16.42■□□□□ 0.22
USP39-207ENST00000450066 EEF2P13639 858 aaKnown RBP16.42■□□□□ 0.22
USP39-207ENST00000450066 NR5A1Q13285 461 aa16.42■□□□□ 0.22
USP39-207ENST00000450066 SEPT2Q15019 361 aa16.42■□□□□ 0.22
USP39-207ENST00000450066 STK38Q15208 465 aa16.42■□□□□ 0.22
USP39-207ENST00000450066 CCDC183Q5T5S1 534 aa16.42■□□□□ 0.22
USP39-207ENST00000450066 OXER1Q8TDS5 423 aa16.42■□□□□ 0.22
USP39-207ENST00000450066 PIBF1Q8WXW3 757 aa16.42■□□□□ 0.22
USP39-207ENST00000450066 PGAP2Q9UHJ9 254 aa16.42■□□□□ 0.22
USP39-207ENST00000450066 GOLGA6L3A6NEY3 463 aa16.41■□□□□ 0.22
USP39-207ENST00000450066 GDF11O95390 407 aa16.41■□□□□ 0.22
USP39-207ENST00000450066 EGFRP00533 1210 aa16.41■□□□□ 0.22
USP39-207ENST00000450066 VEGFAP15692 232 aaPredicted RBP16.41■□□□□ 0.22
USP39-207ENST00000450066 ME1P48163 572 aa16.41■□□□□ 0.22
USP39-207ENST00000450066 ATP2B2Q01814 1243 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms