RNA–Protein interactions for RNA: ENST00000444942.1

LINC00642-203, long intergenic non-protein coding RNA 642, humanhuman

TSL 1 (best)

Gene LINC00642, Length 1,376 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-203ENST00000444942 NFIAQ12857 509 aa11.17□□□□□ -0.62
LINC00642-203ENST00000444942 TRIM60Q495X7 471 aa11.17□□□□□ -0.62
LINC00642-203ENST00000444942 SLFNL1Q499Z3 407 aa11.17□□□□□ -0.62
LINC00642-203ENST00000444942 ADGRA1Q86SQ6 560 aa11.17□□□□□ -0.62
LINC00642-203ENST00000444942 SOCS4Q8WXH5 440 aa11.17□□□□□ -0.62
LINC00642-203ENST00000444942 LPAR1Q92633 364 aa11.17□□□□□ -0.62
LINC00642-203ENST00000444942 NOL10Q9BSC4 688 aaKnown RBP11.17□□□□□ -0.62
LINC00642-203ENST00000444942 MRIQ9BWK5 157 aa11.17□□□□□ -0.62
LINC00642-203ENST00000444942 AATFQ9NY61 560 aaKnown RBP eCLIP11.17□□□□□ -0.62
LINC00642-203ENST00000444942 ATP5JP18859 108 aa11.16□□□□□ -0.62
LINC00642-203ENST00000444942 DYNLL1P63167 89 aaKnown RBP11.16□□□□□ -0.62
LINC00642-203ENST00000444942 TREML2Q5T2D2 321 aa11.16□□□□□ -0.62
LINC00642-203ENST00000444942 ZFPM1Q8IX07 1006 aa11.16□□□□□ -0.62
LINC00642-203ENST00000444942 SCYL3Q8IZE3 742 aa11.16□□□□□ -0.62
LINC00642-203ENST00000444942 MIGA1Q8NAN2 632 aa11.16□□□□□ -0.62
LINC00642-203ENST00000444942 FAM151AQ8WW52 585 aa11.16□□□□□ -0.62
LINC00642-203ENST00000444942 GPATCH3Q96I76 525 aa11.16□□□□□ -0.62
LINC00642-203ENST00000444942 ECHDC1Q9NTX5 307 aa11.16□□□□□ -0.62
LINC00642-203ENST00000444942 PAG1Q9NWQ8 432 aa11.16□□□□□ -0.62
LINC00642-203ENST00000444942 GAKO14976 1311 aa11.16□□□□□ -0.62
LINC00642-203ENST00000444942 FOCADQ5VW36 1801 aa11.16□□□□□ -0.62
LINC00642-203ENST00000444942 MYH1P12882 1939 aa11.16□□□□□ -0.62
LINC00642-203ENST00000444942 BRWD1Q9NSI6 2320 aa11.16□□□□□ -0.62
LINC00642-203ENST00000444942 ZBTB22O15209 634 aa11.16□□□□□ -0.62
LINC00642-203ENST00000444942 CHGBP05060 677 aa11.16□□□□□ -0.62
LINC00642-203ENST00000444942 CCL14Q16627 93 aa11.16□□□□□ -0.62
LINC00642-203ENST00000444942 ZSCAN29Q8IWY8 852 aaPredicted RBP11.16□□□□□ -0.62
LINC00642-203ENST00000444942 SH3RF3Q8TEJ3 882 aaPredicted RBP11.16□□□□□ -0.62
LINC00642-203ENST00000444942 HERVK_113Q902F9 699 aa11.16□□□□□ -0.62
LINC00642-203ENST00000444942 USP6NLQ92738 828 aa11.16□□□□□ -0.62
LINC00642-203ENST00000444942 HAUS7Q99871 368 aa11.16□□□□□ -0.62
LINC00642-203ENST00000444942 PICK1Q9NRD5 415 aa11.16□□□□□ -0.62
LINC00642-203ENST00000444942 MORF4L1Q9UBU8 362 aa11.16□□□□□ -0.62
LINC00642-203ENST00000444942 FAM198AQ9UFP1 575 aa11.16□□□□□ -0.62
LINC00642-203ENST00000444942 DDX20Q9UHI6 824 aaKnown RBP11.16□□□□□ -0.62
LINC00642-203ENST00000444942 GPR75-ASB3A0A0A6YYF3 556 aa11.15□□□□□ -0.63
LINC00642-203ENST00000444942 PHF20L1A8MW92 1017 aa11.15□□□□□ -0.63
LINC00642-203ENST00000444942 MSCO60682 206 aa11.15□□□□□ -0.63
LINC00642-203ENST00000444942 SLURP2P0DP57 97 aa11.15□□□□□ -0.63
LINC00642-203ENST00000444942 FPGSQ05932 587 aa11.15□□□□□ -0.63
LINC00642-203ENST00000444942 TTF1Q15361 905 aaPredicted RBP11.15□□□□□ -0.63
LINC00642-203ENST00000444942 SLC9C2Q5TAH2 1124 aa11.15□□□□□ -0.63
LINC00642-203ENST00000444942 C1orf53Q5VUE5 145 aa11.15□□□□□ -0.63
LINC00642-203ENST00000444942 CCDC129Q6ZRS4 1044 aa11.15□□□□□ -0.63
LINC00642-203ENST00000444942 TEX11Q8IYF3 940 aa11.15□□□□□ -0.63
LINC00642-203ENST00000444942 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.15□□□□□ -0.63
LINC00642-203ENST00000444942 UIMC1Q96RL1 719 aa11.15□□□□□ -0.63
LINC00642-203ENST00000444942 CD320Q9NPF0 282 aa11.15□□□□□ -0.63
LINC00642-203ENST00000444942 DDX4Q9NQI0 724 aaKnown RBP11.15□□□□□ -0.63
LINC00642-203ENST00000444942 TACC3Q9Y6A5 838 aa11.15□□□□□ -0.63
LINC00642-203ENST00000444942 C5orf42Q9H799 3197 aa11.15□□□□□ -0.63
LINC00642-203ENST00000444942 BAHCC1Q9P281 2608 aa11.14□□□□□ -0.63
LINC00642-203ENST00000444942 A0A0G2JMZ2 1700 aa11.14□□□□□ -0.63
LINC00642-203ENST00000444942 KMT2BQ9UMN6 2715 aaPredicted RBP11.14□□□□□ -0.63
LINC00642-203ENST00000444942 TRIM75PA6NK02 468 aa11.14□□□□□ -0.63
LINC00642-203ENST00000444942 GRXCR1A8MXD5 290 aa11.14□□□□□ -0.63
LINC00642-203ENST00000444942 BAG3O95817 575 aa11.14□□□□□ -0.63
LINC00642-203ENST00000444942 PDE6AP16499 860 aa11.14□□□□□ -0.63
LINC00642-203ENST00000444942 MX1P20591 662 aa11.14□□□□□ -0.63
LINC00642-203ENST00000444942 RHBDL3P58872 404 aa11.14□□□□□ -0.63
LINC00642-203ENST00000444942 GJC2Q5T442 439 aaPredicted RBP11.14□□□□□ -0.63
LINC00642-203ENST00000444942 MAPKAPK5Q8IW41 473 aa11.14□□□□□ -0.63
LINC00642-203ENST00000444942 MICALL1Q8N3F8 863 aa11.14□□□□□ -0.63
LINC00642-203ENST00000444942 PROCA1Q8NCQ7 364 aaPredicted RBP11.14□□□□□ -0.63
LINC00642-203ENST00000444942 TGFBRAP1Q8WUH2 860 aa11.14□□□□□ -0.63
LINC00642-203ENST00000444942 FAM163AQ96GL9 167 aaPredicted RBP11.14□□□□□ -0.63
LINC00642-203ENST00000444942 PHOX2BQ99453 314 aa11.14□□□□□ -0.63
LINC00642-203ENST00000444942 COG5Q9UP83 839 aa11.14□□□□□ -0.63
LINC00642-203ENST00000444942 ZNF532Q9HCE3 1301 aa11.14□□□□□ -0.63
LINC00642-203ENST00000444942 NAV1Q8NEY1 1877 aa11.14□□□□□ -0.63
LINC00642-203ENST00000444942 ZFHX2Q9C0A1 2572 aaPredicted RBP11.13□□□□□ -0.63
LINC00642-203ENST00000444942 EPG5Q9HCE0 2579 aa11.13□□□□□ -0.63
LINC00642-203ENST00000444942 BAZ2AQ9UIF9 1905 aaKnown RBP11.13□□□□□ -0.63
LINC00642-203ENST00000444942 KIAA0355O15063 1070 aa11.13□□□□□ -0.63
LINC00642-203ENST00000444942 RGS2P41220 211 aa11.13□□□□□ -0.63
LINC00642-203ENST00000444942 TLE2Q04725 743 aa11.13□□□□□ -0.63
LINC00642-203ENST00000444942 SKIV2LQ15477 1246 aaKnown RBP11.13□□□□□ -0.63
LINC00642-203ENST00000444942 CHD1LQ86WJ1 897 aa11.13□□□□□ -0.63
LINC00642-203ENST00000444942 SMC5Q8IY18 1101 aa11.13□□□□□ -0.63
LINC00642-203ENST00000444942 SAP30BPQ9UHR5 308 aaKnown RBP11.13□□□□□ -0.63
LINC00642-203ENST00000444942 ATAD5Q96QE3 1844 aa11.12□□□□□ -0.63
LINC00642-203ENST00000444942 DDTLA6NHG4 134 aaPredicted RBP11.12□□□□□ -0.63
LINC00642-203ENST00000444942 FAM196BA6NMK8 535 aa11.12□□□□□ -0.63
LINC00642-203ENST00000444942 CLTBP09497 229 aa11.12□□□□□ -0.63
LINC00642-203ENST00000444942 RAG1P15918 1043 aa11.12□□□□□ -0.63
LINC00642-203ENST00000444942 USP5P45974 858 aa11.12□□□□□ -0.63
LINC00642-203ENST00000444942 C8orf34Q49A92 452 aa11.12□□□□□ -0.63
LINC00642-203ENST00000444942 RASIP1Q5U651 963 aa11.12□□□□□ -0.63
LINC00642-203ENST00000444942 ARRDC4Q8NCT1 418 aa11.12□□□□□ -0.63
LINC00642-203ENST00000444942 PI4K2BQ8TCG2 481 aa11.12□□□□□ -0.63
LINC00642-203ENST00000444942 APBA2Q99767 749 aa11.12□□□□□ -0.63
LINC00642-203ENST00000444942 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.12□□□□□ -0.63
LINC00642-203ENST00000444942 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.12□□□□□ -0.63
LINC00642-203ENST00000444942 ASCC2Q9H1I8 757 aaPredicted RBP11.12□□□□□ -0.63
LINC00642-203ENST00000444942 TTC41PQ6P2S7 1318 aa11.12□□□□□ -0.63
LINC00642-203ENST00000444942 ATRNL1Q5VV63 1379 aa11.12□□□□□ -0.63
LINC00642-203ENST00000444942 SIPA1L1O43166 1804 aa11.11□□□□□ -0.63
LINC00642-203ENST00000444942 SALL3Q9BXA9 1300 aa11.11□□□□□ -0.63
LINC00642-203ENST00000444942 MAGEB6P1A0A0J9YX57 407 aa11.11□□□□□ -0.63
LINC00642-203ENST00000444942 KBTBD13C9JR72 458 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms