RNA–Protein interactions for RNA: ENST00000444621.1

HLA-F-221, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-221ENST00000444621 USP17L18D6R9N7 530 aa13.23□□□□□ -0.29
HLA-F-221ENST00000444621 USP17L22D6RA61 530 aa13.23□□□□□ -0.29
HLA-F-221ENST00000444621 USP17L17D6RBQ6 530 aa13.23□□□□□ -0.29
HLA-F-221ENST00000444621 USP17L19D6RCP7 530 aa13.23□□□□□ -0.29
HLA-F-221ENST00000444621 USP17L20D6RJB6 530 aa13.23□□□□□ -0.29
HLA-F-221ENST00000444621 MAGEA10P43363 369 aaPredicted RBP13.23□□□□□ -0.29
HLA-F-221ENST00000444621 CDK8P49336 464 aa13.23□□□□□ -0.29
HLA-F-221ENST00000444621 MFAP1P55081 439 aaKnown RBP13.23□□□□□ -0.29
HLA-F-221ENST00000444621 NUCB1Q02818 461 aa13.23□□□□□ -0.29
HLA-F-221ENST00000444621 USP17L24Q0WX57 530 aa13.23□□□□□ -0.29
HLA-F-221ENST00000444621 ZYXQ15942 572 aaKnown RBP13.23□□□□□ -0.29
HLA-F-221ENST00000444621 SBK1Q52WX2 424 aa13.23□□□□□ -0.29
HLA-F-221ENST00000444621 CTR9Q6PD62 1173 aa13.23□□□□□ -0.29
HLA-F-221ENST00000444621 TDHQ8IZJ6 230 aa13.23□□□□□ -0.29
HLA-F-221ENST00000444621 ZNF444Q8N0Y2 327 aaPredicted RBP13.23□□□□□ -0.29
HLA-F-221ENST00000444621 ANKRD13CQ8N6S4 541 aa13.23□□□□□ -0.29
HLA-F-221ENST00000444621 OSBP2Q969R2 916 aa13.23□□□□□ -0.29
HLA-F-221ENST00000444621 RILPL2Q969X0 211 aa13.23□□□□□ -0.29
HLA-F-221ENST00000444621 DYNLL2Q96FJ2 89 aa13.23□□□□□ -0.29
HLA-F-221ENST00000444621 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.23□□□□□ -0.29
HLA-F-221ENST00000444621 ASCC2Q9H1I8 757 aaPredicted RBP13.23□□□□□ -0.29
HLA-F-221ENST00000444621 BAZ2AQ9UIF9 1905 aaKnown RBP13.22□□□□□ -0.29
HLA-F-221ENST00000444621 IGHDP01880 384 aa13.22□□□□□ -0.29
HLA-F-221ENST00000444621 CYP2D6P10635 497 aa13.22□□□□□ -0.29
HLA-F-221ENST00000444621 PDE4BQ07343 736 aa13.22□□□□□ -0.29
HLA-F-221ENST00000444621 SEPT2Q15019 361 aa13.22□□□□□ -0.29
HLA-F-221ENST00000444621 FAM110CQ1W6H9 321 aa13.22□□□□□ -0.29
HLA-F-221ENST00000444621 ZMYM1Q5SVZ6 1142 aa13.22□□□□□ -0.29
HLA-F-221ENST00000444621 C16orf86Q6ZW13 317 aa13.22□□□□□ -0.29
HLA-F-221ENST00000444621 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.22□□□□□ -0.29
HLA-F-221ENST00000444621 KIAA1683Q9H0B3 1180 aa13.22□□□□□ -0.29
HLA-F-221ENST00000444621 NAPBQ9H115 298 aa13.22□□□□□ -0.29
HLA-F-221ENST00000444621 HELLSQ9NRZ9 838 aa13.22□□□□□ -0.29
HLA-F-221ENST00000444621 LOC285556D6RIA3 1793 aa13.22□□□□□ -0.29
HLA-F-221ENST00000444621 GSG1L2A8MUP6 293 aa13.21□□□□□ -0.29
HLA-F-221ENST00000444621 M0R2C6 588 aa13.21□□□□□ -0.29
HLA-F-221ENST00000444621 CHGBP05060 677 aa13.21□□□□□ -0.29
HLA-F-221ENST00000444621 IRX6P78412 446 aaPredicted RBP13.21□□□□□ -0.29
HLA-F-221ENST00000444621 JAG1P78504 1218 aa13.21□□□□□ -0.29
HLA-F-221ENST00000444621 ATP2B2Q01814 1243 aa13.21□□□□□ -0.29
HLA-F-221ENST00000444621 IFNL3Q8IZI9 196 aa13.21□□□□□ -0.29
HLA-F-221ENST00000444621 ANKLE1Q8NAG6 615 aa13.21□□□□□ -0.29
HLA-F-221ENST00000444621 GPRC5AQ8NFJ5 357 aa13.21□□□□□ -0.29
HLA-F-221ENST00000444621 C12orf42Q96LP6 360 aa13.21□□□□□ -0.29
HLA-F-221ENST00000444621 P2RX7Q99572 595 aaKnown RBP13.21□□□□□ -0.29
HLA-F-221ENST00000444621 UBE2OQ9C0C9 1292 aaKnown RBP13.21□□□□□ -0.29
HLA-F-221ENST00000444621 KANSL2Q9H9L4 492 aa13.21□□□□□ -0.29
HLA-F-221ENST00000444621 EMILIN3Q9NT22 766 aa13.21□□□□□ -0.29
HLA-F-221ENST00000444621 SALL3Q9BXA9 1300 aa13.2□□□□□ -0.3
HLA-F-221ENST00000444621 CYP2D7A0A087X1C5 515 aa13.2□□□□□ -0.3
HLA-F-221ENST00000444621 HIP1O00291 1037 aa13.2□□□□□ -0.3
HLA-F-221ENST00000444621 CCNA1P78396 465 aa13.2□□□□□ -0.3
HLA-F-221ENST00000444621 ICA1Q05084 483 aa13.2□□□□□ -0.3
HLA-F-221ENST00000444621 PPP4R3BQ5MIZ7 849 aa13.2□□□□□ -0.3
HLA-F-221ENST00000444621 NBPF3Q9H094 633 aa13.2□□□□□ -0.3
HLA-F-221ENST00000444621 GOPCQ9HD26 462 aa13.2□□□□□ -0.3
HLA-F-221ENST00000444621 HOXC10Q9NYD6 342 aa13.2□□□□□ -0.3
HLA-F-221ENST00000444621 EYSQ5T1H1 3165 aa13.19□□□□□ -0.3
HLA-F-221ENST00000444621 LAMA2P24043 3122 aaKnown RBP13.19□□□□□ -0.3
HLA-F-221ENST00000444621 RAD21O60216 631 aa13.19□□□□□ -0.3
HLA-F-221ENST00000444621 AKR1B1P15121 316 aa13.19□□□□□ -0.3
HLA-F-221ENST00000444621 HERVK_113P62684 666 aa13.19□□□□□ -0.3
HLA-F-221ENST00000444621 SHROOM1Q2M3G4 852 aaPredicted RBP13.19□□□□□ -0.3
HLA-F-221ENST00000444621 MCMDC2Q4G0Z9 681 aa13.19□□□□□ -0.3
HLA-F-221ENST00000444621 CATSPERGQ6ZRH7 1159 aa13.19□□□□□ -0.3
HLA-F-221ENST00000444621 STK11IPQ8N1F8 1099 aa13.19□□□□□ -0.3
HLA-F-221ENST00000444621 SLC44A5Q8NCS7 719 aa13.19□□□□□ -0.3
HLA-F-221ENST00000444621 LPAR1Q92633 364 aa13.19□□□□□ -0.3
HLA-F-221ENST00000444621 OSBPL3Q9H4L5 887 aa13.19□□□□□ -0.3
HLA-F-221ENST00000444621 C11orf49Q9H6J7 331 aa13.19□□□□□ -0.3
HLA-F-221ENST00000444621 RPTORQ8N122 1335 aa13.18□□□□□ -0.3
HLA-F-221ENST00000444621 MAPK4P31152 587 aa13.18□□□□□ -0.3
HLA-F-221ENST00000444621 TRIM32Q13049 653 aa13.18□□□□□ -0.3
HLA-F-221ENST00000444621 PLEKHM2Q8IWE5 1019 aa13.18□□□□□ -0.3
HLA-F-221ENST00000444621 ACER1Q8TDN7 264 aa13.18□□□□□ -0.3
HLA-F-221ENST00000444621 SEC62Q99442 399 aaKnown RBP13.18□□□□□ -0.3
HLA-F-221ENST00000444621 PAGR1Q9BTK6 254 aa13.18□□□□□ -0.3
HLA-F-221ENST00000444621 TANGO6Q9C0B7 1094 aa13.18□□□□□ -0.3
HLA-F-221ENST00000444621 RPAP3Q9H6T3 665 aaPredicted RBP13.18□□□□□ -0.3
HLA-F-221ENST00000444621 HMX1Q9NP08 348 aaPredicted RBP13.18□□□□□ -0.3
HLA-F-221ENST00000444621 DIAPH3Q9NSV4 1193 aa13.18□□□□□ -0.3
HLA-F-221ENST00000444621 MORF4L1Q9UBU8 362 aa13.18□□□□□ -0.3
HLA-F-221ENST00000444621 VCANP13611 3396 aa13.18□□□□□ -0.3
HLA-F-221ENST00000444621 HMGCRP04035 888 aa13.17□□□□□ -0.3
HLA-F-221ENST00000444621 TSPY3P0CV98 308 aa13.17□□□□□ -0.3
HLA-F-221ENST00000444621 TSPY8P0CW00 308 aa13.17□□□□□ -0.3
HLA-F-221ENST00000444621 VCAM1P19320 739 aa13.17□□□□□ -0.3
HLA-F-221ENST00000444621 GUCY1A2P33402 732 aa13.17□□□□□ -0.3
HLA-F-221ENST00000444621 COG2Q14746 738 aa13.17□□□□□ -0.3
HLA-F-221ENST00000444621 GUCD1Q96NT3 240 aa13.17□□□□□ -0.3
HLA-F-221ENST00000444621 TMX2Q9Y320 296 aa13.17□□□□□ -0.3
HLA-F-221ENST00000444621 RABGAP1Q9Y3P9 1069 aa13.17□□□□□ -0.3
HLA-F-221ENST00000444621 PLXNB2O15031 1838 aa13.17□□□□□ -0.3
HLA-F-221ENST00000444621 EEF2P13639 858 aaKnown RBP13.16□□□□□ -0.3
HLA-F-221ENST00000444621 ERVK-9P63128 1117 aa13.16□□□□□ -0.3
HLA-F-221ENST00000444621 ERVK-24P63145 666 aa13.16□□□□□ -0.3
HLA-F-221ENST00000444621 EVX2Q03828 476 aa13.16□□□□□ -0.3
HLA-F-221ENST00000444621 PPARAQ07869 468 aa13.16□□□□□ -0.3
HLA-F-221ENST00000444621 FAM161BQ96MY7 647 aa13.16□□□□□ -0.3
HLA-F-221ENST00000444621 VCPKMTQ9H867 229 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms