RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 PRKCZQ05513 592 aa22.16■■□□□ 1.14
CCDC188-202ENST00000444532 COG2Q14746 738 aa22.16■■□□□ 1.14
CCDC188-202ENST00000444532 ZNF333Q96JL9 665 aa22.16■■□□□ 1.14
CCDC188-202ENST00000444532 TXNRD2Q9NNW7 524 aa22.16■■□□□ 1.14
CCDC188-202ENST00000444532 DIAPH3Q9NSV4 1193 aa22.16■■□□□ 1.14
CCDC188-202ENST00000444532 HOXC10Q9NYD6 342 aa22.16■■□□□ 1.14
CCDC188-202ENST00000444532 NYAP2Q9P242 653 aa22.16■■□□□ 1.14
CCDC188-202ENST00000444532 GABRQQ9UN88 632 aa22.16■■□□□ 1.14
CCDC188-202ENST00000444532 FGAP02671 866 aa22.15■■□□□ 1.14
CCDC188-202ENST00000444532 ERVK-9P63128 1117 aa22.15■■□□□ 1.14
CCDC188-202ENST00000444532 ERVK-24P63145 666 aa22.15■■□□□ 1.14
CCDC188-202ENST00000444532 KIAA1755Q5JYT7 1200 aa22.15■■□□□ 1.14
CCDC188-202ENST00000444532 TTC22Q5TAA0 569 aa22.15■■□□□ 1.14
CCDC188-202ENST00000444532 ZNF589Q86UQ0 364 aaPredicted RBP22.15■■□□□ 1.14
CCDC188-202ENST00000444532 GOPCQ9HD26 462 aa22.15■■□□□ 1.14
CCDC188-202ENST00000444532 ZMYM6O95789 1325 aa22.14■■□□□ 1.14
CCDC188-202ENST00000444532 IGKV6D-41A0A0C4DH26 115 aa22.14■■□□□ 1.13
CCDC188-202ENST00000444532 WDR46O15213 610 aaKnown RBP22.14■■□□□ 1.13
CCDC188-202ENST00000444532 GRK4P32298 578 aa22.14■■□□□ 1.13
CCDC188-202ENST00000444532 FLT3LGP49771 235 aa22.14■■□□□ 1.13
CCDC188-202ENST00000444532 IRF5Q13568 498 aa22.14■■□□□ 1.13
CCDC188-202ENST00000444532 Q3C1V9 767 aa22.14■■□□□ 1.13
CCDC188-202ENST00000444532 POTEEQ6S8J3 1075 aa22.14■■□□□ 1.13
CCDC188-202ENST00000444532 PAGR1Q9BTK6 254 aa22.14■■□□□ 1.13
CCDC188-202ENST00000444532 TANGO6Q9C0B7 1094 aa22.14■■□□□ 1.13
CCDC188-202ENST00000444532 DOCK3Q8IZD9 2030 aa22.14■■□□□ 1.13
CCDC188-202ENST00000444532 SPDYE16A6NNV3 312 aaPredicted RBP22.13■■□□□ 1.13
CCDC188-202ENST00000444532 TSPY3P0CV98 308 aa22.13■■□□□ 1.13
CCDC188-202ENST00000444532 TSPY8P0CW00 308 aa22.13■■□□□ 1.13
CCDC188-202ENST00000444532 MAPK4P31152 587 aa22.13■■□□□ 1.13
CCDC188-202ENST00000444532 CWC27Q6UX04 472 aaKnown RBP22.13■■□□□ 1.13
CCDC188-202ENST00000444532 SPICE1Q8N0Z3 855 aa22.13■■□□□ 1.13
CCDC188-202ENST00000444532 SLAIN1Q8ND83 568 aa22.13■■□□□ 1.13
CCDC188-202ENST00000444532 NEDD1Q8NHV4 660 aa22.13■■□□□ 1.13
CCDC188-202ENST00000444532 SH3TC2Q8TF17 1288 aa22.13■■□□□ 1.13
CCDC188-202ENST00000444532 PLIN4Q96Q06 1357 aa22.12■■□□□ 1.13
CCDC188-202ENST00000444532 PEX10O60683 326 aa22.12■■□□□ 1.13
CCDC188-202ENST00000444532 GSPT1P15170 499 aaKnown RBP22.12■■□□□ 1.13
CCDC188-202ENST00000444532 CCNA1P78396 465 aa22.12■■□□□ 1.13
CCDC188-202ENST00000444532 TFAP4Q01664 338 aa22.12■■□□□ 1.13
CCDC188-202ENST00000444532 MLLT1Q03111 559 aaPredicted RBP22.12■■□□□ 1.13
CCDC188-202ENST00000444532 CTDSPL2Q05D32 466 aa22.12■■□□□ 1.13
CCDC188-202ENST00000444532 CCAR1Q8IX12 1150 aaKnown RBP22.12■■□□□ 1.13
CCDC188-202ENST00000444532 PXYLP1Q8TE99 480 aa22.12■■□□□ 1.13
CCDC188-202ENST00000444532 MKL1Q969V6 931 aa22.12■■□□□ 1.13
CCDC188-202ENST00000444532 MTMR4Q9NYA4 1195 aa22.12■■□□□ 1.13
CCDC188-202ENST00000444532 CLIP2Q9UDT6 1046 aa22.12■■□□□ 1.13
CCDC188-202ENST00000444532 SYNPO2Q9UMS6 1093 aa22.12■■□□□ 1.13
CCDC188-202ENST00000444532 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.12■■□□□ 1.13
CCDC188-202ENST00000444532 RBBP6Q7Z6E9 1792 aaKnown RBP22.12■■□□□ 1.13
CCDC188-202ENST00000444532 RLFQ13129 1914 aa22.12■■□□□ 1.13
CCDC188-202ENST00000444532 MYH4Q9Y623 1939 aa22.12■■□□□ 1.13
CCDC188-202ENST00000444532 ADCY3O60266 1144 aa22.11■■□□□ 1.13
CCDC188-202ENST00000444532 CNMDO75829 334 aa22.11■■□□□ 1.13
CCDC188-202ENST00000444532 PPP4R3BQ5MIZ7 849 aa22.11■■□□□ 1.13
CCDC188-202ENST00000444532 CEP95Q96GE4 821 aa22.11■■□□□ 1.13
CCDC188-202ENST00000444532 TMEM106CQ9BVX2 250 aa22.11■■□□□ 1.13
CCDC188-202ENST00000444532 GJD2Q9UKL4 321 aa22.11■■□□□ 1.13
CCDC188-202ENST00000444532 FLOT1O75955 427 aa22.1■■□□□ 1.13
CCDC188-202ENST00000444532 TTLL1O95922 423 aa22.1■■□□□ 1.13
CCDC188-202ENST00000444532 FGRP09769 529 aa22.1■■□□□ 1.13
CCDC188-202ENST00000444532 DSG3P32926 999 aa22.1■■□□□ 1.13
CCDC188-202ENST00000444532 FAM47AQ5JRC9 791 aa22.1■■□□□ 1.13
CCDC188-202ENST00000444532 MB21D1Q8N884 522 aa22.1■■□□□ 1.13
CCDC188-202ENST00000444532 BTBD7Q9P203 1132 aa22.1■■□□□ 1.13
CCDC188-202ENST00000444532 PARP14Q460N5 1801 aa22.09■■□□□ 1.13
CCDC188-202ENST00000444532 F5H6K3 240 aa22.09■■□□□ 1.13
CCDC188-202ENST00000444532 ORC4O43929 436 aa22.09■■□□□ 1.13
CCDC188-202ENST00000444532 KLRC3Q07444 240 aa22.09■■□□□ 1.13
CCDC188-202ENST00000444532 CENPQQ7L2Z9 268 aaPredicted RBP22.09■■□□□ 1.13
CCDC188-202ENST00000444532 PORCNQ9H237 461 aa22.09■■□□□ 1.13
CCDC188-202ENST00000444532 BIN2Q9UBW5 565 aaPredicted RBP22.09■■□□□ 1.13
CCDC188-202ENST00000444532 PLXNB2O15031 1838 aa22.08■■□□□ 1.13
CCDC188-202ENST00000444532 TSPY2A6NKD2 308 aa22.08■■□□□ 1.13
CCDC188-202ENST00000444532 RAD21O60216 631 aa22.08■■□□□ 1.13
CCDC188-202ENST00000444532 UBXN2AP68543 259 aa22.08■■□□□ 1.13
CCDC188-202ENST00000444532 PLEKHH3Q7Z736 793 aa22.08■■□□□ 1.13
CCDC188-202ENST00000444532 SOCS4Q8WXH5 440 aa22.08■■□□□ 1.13
CCDC188-202ENST00000444532 INCENPQ9NQS7 918 aa22.08■■□□□ 1.13
CCDC188-202ENST00000444532 A0A0G2JMZ2 1700 aa22.07■■□□□ 1.12
CCDC188-202ENST00000444532 POTEFA5A3E0 1075 aa22.07■■□□□ 1.12
CCDC188-202ENST00000444532 PCP11498 1178 aaKnown RBP22.07■■□□□ 1.12
CCDC188-202ENST00000444532 GPR142Q7Z601 462 aa22.07■■□□□ 1.12
CCDC188-202ENST00000444532 NUDT12Q9BQG2 462 aa22.07■■□□□ 1.12
CCDC188-202ENST00000444532 DSCC1Q9BVC3 393 aa22.07■■□□□ 1.12
CCDC188-202ENST00000444532 CWC22Q9HCG8 908 aaKnown RBP22.07■■□□□ 1.12
CCDC188-202ENST00000444532 TACC3Q9Y6A5 838 aa22.07■■□□□ 1.12
CCDC188-202ENST00000444532 CENPFP49454 3210 aa22.06■■□□□ 1.12
CCDC188-202ENST00000444532 RANBP6O60518 1105 aaKnown RBP22.06■■□□□ 1.12
CCDC188-202ENST00000444532 NDUFB10O96000 172 aa22.06■■□□□ 1.12
CCDC188-202ENST00000444532 ELNP15502 786 aa22.06■■□□□ 1.12
CCDC188-202ENST00000444532 FAM83BQ5T0W9 1011 aa22.06■■□□□ 1.12
CCDC188-202ENST00000444532 GMCL1P1Q8NEA9 526 aa22.06■■□□□ 1.12
CCDC188-202ENST00000444532 RUFY2Q8WXA3 655 aa22.06■■□□□ 1.12
CCDC188-202ENST00000444532 ADAMTS5Q9UNA0 930 aa22.06■■□□□ 1.12
CCDC188-202ENST00000444532 ZNF213O14771 459 aa22.05■■□□□ 1.12
CCDC188-202ENST00000444532 MYCP01106 439 aaPredicted RBP22.05■■□□□ 1.12
CCDC188-202ENST00000444532 XRCC5P13010 732 aaKnown RBP22.05■■□□□ 1.12
CCDC188-202ENST00000444532 HAND2P61296 217 aa22.05■■□□□ 1.12
CCDC188-202ENST00000444532 MORN1Q5T089 497 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms