RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 BCRP11274 1271 aa20.66■□□□□ 0.9
SMARCAL1-209ENST00000444508 LACTBP83111 547 aaPredicted RBP20.66■□□□□ 0.9
SMARCAL1-209ENST00000444508 STAG1Q8WVM7 1258 aa20.66■□□□□ 0.9
SMARCAL1-209ENST00000444508 CEP95Q96GE4 821 aa20.66■□□□□ 0.9
SMARCAL1-209ENST00000444508 RPAP3Q9H6T3 665 aaPredicted RBP20.66■□□□□ 0.9
SMARCAL1-209ENST00000444508 MTMR4Q9NYA4 1195 aa20.66■□□□□ 0.9
SMARCAL1-209ENST00000444508 TTLL1O95922 423 aa20.65■□□□□ 0.9
SMARCAL1-209ENST00000444508 HERVK_113P62684 666 aa20.65■□□□□ 0.9
SMARCAL1-209ENST00000444508 CATSPERGQ6ZRH7 1159 aa20.65■□□□□ 0.9
SMARCAL1-209ENST00000444508 KIAA1211Q6ZU35 1233 aa20.65■□□□□ 0.9
SMARCAL1-209ENST00000444508 TBC1D10CQ8IV04 446 aa20.65■□□□□ 0.9
SMARCAL1-209ENST00000444508 SPICE1Q8N0Z3 855 aa20.65■□□□□ 0.9
SMARCAL1-209ENST00000444508 GTF3C2Q8WUA4 911 aaPredicted RBP20.65■□□□□ 0.9
SMARCAL1-209ENST00000444508 P2RX7Q99572 595 aaKnown RBP20.65■□□□□ 0.9
SMARCAL1-209ENST00000444508 TANGO6Q9C0B7 1094 aa20.65■□□□□ 0.9
SMARCAL1-209ENST00000444508 MCOLN1Q9GZU1 580 aa20.65■□□□□ 0.9
SMARCAL1-209ENST00000444508 NBPF3Q9H094 633 aa20.65■□□□□ 0.9
SMARCAL1-209ENST00000444508 EFCC1Q9HA90 598 aa20.65■□□□□ 0.9
SMARCAL1-209ENST00000444508 CLIP2Q9UDT6 1046 aa20.65■□□□□ 0.9
SMARCAL1-209ENST00000444508 TRIM17Q9Y577 477 aa20.65■□□□□ 0.9
SMARCAL1-209ENST00000444508 TACC3Q9Y6A5 838 aa20.65■□□□□ 0.9
SMARCAL1-209ENST00000444508 CDC45O75419 566 aa20.64■□□□□ 0.89
SMARCAL1-209ENST00000444508 PTH1RQ03431 593 aa20.64■□□□□ 0.89
SMARCAL1-209ENST00000444508 PKN2Q16513 984 aaKnown RBP20.64■□□□□ 0.89
SMARCAL1-209ENST00000444508 FAM110CQ1W6H9 321 aa20.64■□□□□ 0.89
SMARCAL1-209ENST00000444508 ANKRD13CQ8N6S4 541 aa20.64■□□□□ 0.89
SMARCAL1-209ENST00000444508 ESYT1Q9BSJ8 1104 aa20.64■□□□□ 0.89
SMARCAL1-209ENST00000444508 U3KPZ7 1027 aaPredicted RBP20.64■□□□□ 0.89
SMARCAL1-209ENST00000444508 MYH4Q9Y623 1939 aa20.64■□□□□ 0.89
SMARCAL1-209ENST00000444508 WDR46O15213 610 aaKnown RBP20.63■□□□□ 0.89
SMARCAL1-209ENST00000444508 NT5C2P49902 561 aa20.63■□□□□ 0.89
SMARCAL1-209ENST00000444508 OTOP1Q7RTM1 612 aa20.63■□□□□ 0.89
SMARCAL1-209ENST00000444508 ESR2Q92731 530 aa20.63■□□□□ 0.89
SMARCAL1-209ENST00000444508 SYNPO2Q9UMS6 1093 aa20.63■□□□□ 0.89
SMARCAL1-209ENST00000444508 FMNL1O95466 1100 aaPredicted RBP20.62■□□□□ 0.89
SMARCAL1-209ENST00000444508 KIAA1755Q5JYT7 1200 aa20.62■□□□□ 0.89
SMARCAL1-209ENST00000444508 MKL1Q969V6 931 aa20.62■□□□□ 0.89
SMARCAL1-209ENST00000444508 STX8Q9UNK0 236 aa20.62■□□□□ 0.89
SMARCAL1-209ENST00000444508 NEDD4P46934 1319 aa20.61■□□□□ 0.89
SMARCAL1-209ENST00000444508 ECM2O94769 699 aaPredicted RBP20.61■□□□□ 0.89
SMARCAL1-209ENST00000444508 GNRH1P01148 92 aa20.61■□□□□ 0.89
SMARCAL1-209ENST00000444508 PSMC4P43686 418 aa20.61■□□□□ 0.89
SMARCAL1-209ENST00000444508 FCGRTP55899 365 aa20.61■□□□□ 0.89
SMARCAL1-209ENST00000444508 LRRC47Q8N1G4 583 aaKnown RBP20.61■□□□□ 0.89
SMARCAL1-209ENST00000444508 ARHGAP39Q9C0H5 1083 aa20.61■□□□□ 0.89
SMARCAL1-209ENST00000444508 F5H6K3 240 aa20.6■□□□□ 0.89
SMARCAL1-209ENST00000444508 NMT2O60551 498 aa20.6■□□□□ 0.89
SMARCAL1-209ENST00000444508 FLOT1O75955 427 aa20.6■□□□□ 0.89
SMARCAL1-209ENST00000444508 KLRC3Q07444 240 aa20.6■□□□□ 0.89
SMARCAL1-209ENST00000444508 COG2Q14746 738 aa20.6■□□□□ 0.89
SMARCAL1-209ENST00000444508 MAP4K1Q92918 833 aa20.6■□□□□ 0.89
SMARCAL1-209ENST00000444508 PAGR1Q9BTK6 254 aa20.6■□□□□ 0.89
SMARCAL1-209ENST00000444508 KRT23Q9C075 422 aa20.6■□□□□ 0.89
SMARCAL1-209ENST00000444508 CNNM2Q9H8M5 875 aa20.6■□□□□ 0.89
SMARCAL1-209ENST00000444508 ANO2Q9NQ90 1003 aa20.6■□□□□ 0.89
SMARCAL1-209ENST00000444508 IL17RBQ9NRM6 502 aa20.6■□□□□ 0.89
SMARCAL1-209ENST00000444508 TCP11L1Q9NUJ3 509 aa20.6■□□□□ 0.89
SMARCAL1-209ENST00000444508 HOXC10Q9NYD6 342 aa20.6■□□□□ 0.89
SMARCAL1-209ENST00000444508 MORF4L1Q9UBU8 362 aa20.6■□□□□ 0.89
SMARCAL1-209ENST00000444508 NDUFB10O96000 172 aa20.59■□□□□ 0.89
SMARCAL1-209ENST00000444508 FAM83BQ5T0W9 1011 aa20.59■□□□□ 0.89
SMARCAL1-209ENST00000444508 FBXO46Q6PJ61 603 aaPredicted RBP20.59■□□□□ 0.89
SMARCAL1-209ENST00000444508 GMCL1P1Q8NEA9 526 aa20.59■□□□□ 0.89
SMARCAL1-209ENST00000444508 GPRC5AQ8NFJ5 357 aa20.59■□□□□ 0.89
SMARCAL1-209ENST00000444508 TRIM47Q96LD4 638 aa20.59■□□□□ 0.89
SMARCAL1-209ENST00000444508 RABGAP1Q9Y3P9 1069 aa20.59■□□□□ 0.89
SMARCAL1-209ENST00000444508 ZSWIM8A7E2V4 1837 aa20.59■□□□□ 0.89
SMARCAL1-209ENST00000444508 SPDYE16A6NNV3 312 aaPredicted RBP20.58■□□□□ 0.89
SMARCAL1-209ENST00000444508 KDM4AO75164 1064 aa20.58■□□□□ 0.89
SMARCAL1-209ENST00000444508 CYP21A2P08686 494 aa20.58■□□□□ 0.89
SMARCAL1-209ENST00000444508 HOXD10P28358 340 aa20.58■□□□□ 0.89
SMARCAL1-209ENST00000444508 CAP1Q01518 475 aa20.58■□□□□ 0.89
SMARCAL1-209ENST00000444508 TRDNQ13061 729 aa20.58■□□□□ 0.89
SMARCAL1-209ENST00000444508 LBX2Q6XYB7 198 aa20.58■□□□□ 0.89
SMARCAL1-209ENST00000444508 LSG1Q9H089 658 aaKnown RBP20.58■□□□□ 0.89
SMARCAL1-209ENST00000444508 RBPJLQ9UBG7 517 aa20.58■□□□□ 0.89
SMARCAL1-209ENST00000444508 RBM8AQ9Y5S9 174 aaKnown RBP20.58■□□□□ 0.89
SMARCAL1-209ENST00000444508 MGAMO43451 1857 aa20.58■□□□□ 0.88
SMARCAL1-209ENST00000444508 MYPNQ86TC9 1320 aa20.57■□□□□ 0.88
SMARCAL1-209ENST00000444508 B4E1Z4 1266 aa20.57■□□□□ 0.88
SMARCAL1-209ENST00000444508 CTGFP29279 349 aa20.57■□□□□ 0.88
SMARCAL1-209ENST00000444508 DSG3P32926 999 aa20.57■□□□□ 0.88
SMARCAL1-209ENST00000444508 PRMT2P55345 433 aa20.57■□□□□ 0.88
SMARCAL1-209ENST00000444508 ERVK-9P63128 1117 aa20.57■□□□□ 0.88
SMARCAL1-209ENST00000444508 ERVK-24P63145 666 aa20.57■□□□□ 0.88
SMARCAL1-209ENST00000444508 CCDC178Q5BJE1 867 aa20.57■□□□□ 0.88
SMARCAL1-209ENST00000444508 SLFN13Q68D06 897 aa20.57■□□□□ 0.88
SMARCAL1-209ENST00000444508 SAMD1Q6SPF0 538 aaPredicted RBP20.57■□□□□ 0.88
SMARCAL1-209ENST00000444508 IQCA1Q86XH1 822 aa20.57■□□□□ 0.88
SMARCAL1-209ENST00000444508 CCAR1Q8IX12 1150 aaKnown RBP20.57■□□□□ 0.88
SMARCAL1-209ENST00000444508 TXNRD2Q9NNW7 524 aa20.57■□□□□ 0.88
SMARCAL1-209ENST00000444508 PTPN22Q9Y2R2 807 aa20.57■□□□□ 0.88
SMARCAL1-209ENST00000444508 TNPO2O14787 897 aaKnown RBP20.56■□□□□ 0.88
SMARCAL1-209ENST00000444508 CCNA1P78396 465 aa20.56■□□□□ 0.88
SMARCAL1-209ENST00000444508 MB21D1Q8N884 522 aa20.56■□□□□ 0.88
SMARCAL1-209ENST00000444508 COA7Q96BR5 231 aa20.56■□□□□ 0.88
SMARCAL1-209ENST00000444508 ABHD8Q96I13 439 aa20.56■□□□□ 0.88
SMARCAL1-209ENST00000444508 NUP88Q99567 741 aaPredicted RBP20.56■□□□□ 0.88
SMARCAL1-209ENST00000444508 ISY1Q9ULR0 285 aaKnown RBP20.56■□□□□ 0.88
SMARCAL1-209ENST00000444508 PEX10O60683 326 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms