RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 MTFR1Q15390 333 aa22.47■■□□□ 1.19
ATPAF2-201ENST00000444058 PLEKHM2Q8IWE5 1019 aa22.47■■□□□ 1.19
ATPAF2-201ENST00000444058 NKX2-3Q8TAU0 364 aa22.47■■□□□ 1.19
ATPAF2-201ENST00000444058 SOCS4Q8WXH5 440 aa22.47■■□□□ 1.19
ATPAF2-201ENST00000444058 PAGR1Q9BTK6 254 aa22.47■■□□□ 1.19
ATPAF2-201ENST00000444058 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.47■■□□□ 1.19
ATPAF2-201ENST00000444058 NAPBQ9H115 298 aa22.47■■□□□ 1.19
ATPAF2-201ENST00000444058 GJB1P08034 283 aa22.46■■□□□ 1.19
ATPAF2-201ENST00000444058 SLC3A2P08195 630 aaKnown RBP22.46■■□□□ 1.19
ATPAF2-201ENST00000444058 CAPN2P17655 700 aa22.46■■□□□ 1.19
ATPAF2-201ENST00000444058 CLEC10AQ8IUN9 316 aa22.46■■□□□ 1.19
ATPAF2-201ENST00000444058 CCAR1Q8IX12 1150 aaKnown RBP22.46■■□□□ 1.19
ATPAF2-201ENST00000444058 WDR46O15213 610 aaKnown RBP22.45■■□□□ 1.18
ATPAF2-201ENST00000444058 CNMDO75829 334 aa22.45■■□□□ 1.18
ATPAF2-201ENST00000444058 XRCC5P13010 732 aaKnown RBP22.45■■□□□ 1.18
ATPAF2-201ENST00000444058 CCL5P13501 91 aa22.45■■□□□ 1.18
ATPAF2-201ENST00000444058 PDE4BQ07343 736 aa22.45■■□□□ 1.18
ATPAF2-201ENST00000444058 KIAA1755Q5JYT7 1200 aa22.45■■□□□ 1.18
ATPAF2-201ENST00000444058 ZNF444Q8N0Y2 327 aaPredicted RBP22.45■■□□□ 1.18
ATPAF2-201ENST00000444058 MB21D1Q8N884 522 aa22.45■■□□□ 1.18
ATPAF2-201ENST00000444058 NUDT12Q9BQG2 462 aa22.45■■□□□ 1.18
ATPAF2-201ENST00000444058 TANGO6Q9C0B7 1094 aa22.45■■□□□ 1.18
ATPAF2-201ENST00000444058 PORCNQ9H237 461 aa22.45■■□□□ 1.18
ATPAF2-201ENST00000444058 NYAP2Q9P242 653 aa22.45■■□□□ 1.18
ATPAF2-201ENST00000444058 BRCA2P51587 3418 aa22.45■■□□□ 1.18
ATPAF2-201ENST00000444058 DOCK3Q8IZD9 2030 aa22.45■■□□□ 1.18
ATPAF2-201ENST00000444058 PDE4DIPQ5VU43 2346 aa22.45■■□□□ 1.18
ATPAF2-201ENST00000444058 PEX10O60683 326 aa22.44■■□□□ 1.18
ATPAF2-201ENST00000444058 MYCP01106 439 aaPredicted RBP22.44■■□□□ 1.18
ATPAF2-201ENST00000444058 INHAP05111 366 aa22.44■■□□□ 1.18
ATPAF2-201ENST00000444058 ELNP15502 786 aa22.44■■□□□ 1.18
ATPAF2-201ENST00000444058 PPARAQ07869 468 aa22.44■■□□□ 1.18
ATPAF2-201ENST00000444058 GPR142Q7Z601 462 aa22.44■■□□□ 1.18
ATPAF2-201ENST00000444058 RNF208Q9H0X6 261 aa22.44■■□□□ 1.18
ATPAF2-201ENST00000444058 GOPCQ9HD26 462 aa22.44■■□□□ 1.18
ATPAF2-201ENST00000444058 SYNPO2Q9UMS6 1093 aa22.44■■□□□ 1.18
ATPAF2-201ENST00000444058 GREB1LQ9C091 1923 aaPredicted RBP22.43■■□□□ 1.18
ATPAF2-201ENST00000444058 FOXP2O15409 715 aa22.43■■□□□ 1.18
ATPAF2-201ENST00000444058 HMGCRP04035 888 aa22.43■■□□□ 1.18
ATPAF2-201ENST00000444058 GJA8P48165 433 aa22.43■■□□□ 1.18
ATPAF2-201ENST00000444058 ALX1Q15699 326 aa22.43■■□□□ 1.18
ATPAF2-201ENST00000444058 MCMDC2Q4G0Z9 681 aa22.43■■□□□ 1.18
ATPAF2-201ENST00000444058 PLEKHH3Q7Z736 793 aa22.43■■□□□ 1.18
ATPAF2-201ENST00000444058 USP6NLQ92738 828 aa22.43■■□□□ 1.18
ATPAF2-201ENST00000444058 BTBD7Q9P203 1132 aa22.43■■□□□ 1.18
ATPAF2-201ENST00000444058 TNRC18O15417 2968 aaPredicted RBP22.43■■□□□ 1.18
ATPAF2-201ENST00000444058 IGKV6D-41A0A0C4DH26 115 aa22.42■■□□□ 1.18
ATPAF2-201ENST00000444058 TRIM6-TRIM34B2RNG4 842 aa22.42■■□□□ 1.18
ATPAF2-201ENST00000444058 DSG3P32926 999 aa22.42■■□□□ 1.18
ATPAF2-201ENST00000444058 ATP2B2Q01814 1243 aa22.42■■□□□ 1.18
ATPAF2-201ENST00000444058 MORN1Q5T089 497 aa22.42■■□□□ 1.18
ATPAF2-201ENST00000444058 CCDC129Q6ZRS4 1044 aa22.42■■□□□ 1.18
ATPAF2-201ENST00000444058 TRMT44Q8IYL2 757 aaKnown RBP22.42■■□□□ 1.18
ATPAF2-201ENST00000444058 SPICE1Q8N0Z3 855 aa22.42■■□□□ 1.18
ATPAF2-201ENST00000444058 PLIN4Q96Q06 1357 aa22.41■■□□□ 1.18
ATPAF2-201ENST00000444058 FLOT1O75955 427 aa22.41■■□□□ 1.18
ATPAF2-201ENST00000444058 STK11IPQ8N1F8 1099 aa22.41■■□□□ 1.18
ATPAF2-201ENST00000444058 MKL1Q969V6 931 aa22.41■■□□□ 1.18
ATPAF2-201ENST00000444058 FAM227BQ96M60 508 aa22.41■■□□□ 1.18
ATPAF2-201ENST00000444058 ANAPC4Q9UJX5 808 aa22.41■■□□□ 1.18
ATPAF2-201ENST00000444058 A0A0D9SFI3 127 aa22.4■■□□□ 1.18
ATPAF2-201ENST00000444058 PRDM1O75626 825 aa22.4■■□□□ 1.18
ATPAF2-201ENST00000444058 RGS2P41220 211 aa22.4■■□□□ 1.18
ATPAF2-201ENST00000444058 SHCBP1Q8NEM2 672 aa22.4■■□□□ 1.18
ATPAF2-201ENST00000444058 NEDD1Q8NHV4 660 aa22.4■■□□□ 1.18
ATPAF2-201ENST00000444058 RILPL2Q969X0 211 aa22.4■■□□□ 1.18
ATPAF2-201ENST00000444058 UNC93B1Q9H1C4 597 aa22.4■■□□□ 1.18
ATPAF2-201ENST00000444058 PAK6Q9NQU5 681 aaPredicted RBP22.4■■□□□ 1.18
ATPAF2-201ENST00000444058 ADAMTS5Q9UNA0 930 aa22.4■■□□□ 1.18
ATPAF2-201ENST00000444058 ZMYM6O95789 1325 aa22.39■■□□□ 1.18
ATPAF2-201ENST00000444058 SLC15A5A6NIM6 579 aa22.39■■□□□ 1.17
ATPAF2-201ENST00000444058 CYP2B6P20813 491 aa22.39■■□□□ 1.17
ATPAF2-201ENST00000444058 VPS53Q5VIR6 699 aa22.39■■□□□ 1.17
ATPAF2-201ENST00000444058 U2AF1L4Q8WU68 220 aaKnown RBP22.39■■□□□ 1.17
ATPAF2-201ENST00000444058 SHISA4Q96DD7 197 aa22.39■■□□□ 1.17
ATPAF2-201ENST00000444058 CWC22Q9HCG8 908 aaKnown RBP22.39■■□□□ 1.17
ATPAF2-201ENST00000444058 MTMR4Q9NYA4 1195 aa22.39■■□□□ 1.17
ATPAF2-201ENST00000444058 RLFQ13129 1914 aa22.39■■□□□ 1.17
ATPAF2-201ENST00000444058 PLXNB2O15031 1838 aa22.38■■□□□ 1.17
ATPAF2-201ENST00000444058 F5H6K3 240 aa22.38■■□□□ 1.17
ATPAF2-201ENST00000444058 STRNO43815 780 aa22.38■■□□□ 1.17
ATPAF2-201ENST00000444058 SGPL1O95470 568 aa22.38■■□□□ 1.17
ATPAF2-201ENST00000444058 TTLL1O95922 423 aa22.38■■□□□ 1.17
ATPAF2-201ENST00000444058 FGRP09769 529 aa22.38■■□□□ 1.17
ATPAF2-201ENST00000444058 TSPY3P0CV98 308 aa22.38■■□□□ 1.17
ATPAF2-201ENST00000444058 TSPY8P0CW00 308 aa22.38■■□□□ 1.17
ATPAF2-201ENST00000444058 SDSP20132 328 aa22.38■■□□□ 1.17
ATPAF2-201ENST00000444058 PTPREP23469 700 aa22.38■■□□□ 1.17
ATPAF2-201ENST00000444058 MFAP1P55081 439 aaKnown RBP22.38■■□□□ 1.17
ATPAF2-201ENST00000444058 KLRC3Q07444 240 aa22.38■■□□□ 1.17
ATPAF2-201ENST00000444058 MAP2K5Q13163 448 aa22.38■■□□□ 1.17
ATPAF2-201ENST00000444058 NMIQ13287 307 aaPredicted RBP22.38■■□□□ 1.17
ATPAF2-201ENST00000444058 PPP4R3BQ5MIZ7 849 aa22.38■■□□□ 1.17
ATPAF2-201ENST00000444058 TRIB2Q92519 343 aa22.38■■□□□ 1.17
ATPAF2-201ENST00000444058 CEP95Q96GE4 821 aa22.38■■□□□ 1.17
ATPAF2-201ENST00000444058 APBA2Q99767 749 aa22.38■■□□□ 1.17
ATPAF2-201ENST00000444058 MOV10L1Q9BXT6 1211 aaKnown RBP22.38■■□□□ 1.17
ATPAF2-201ENST00000444058 SPATC1LQ9H0A9 340 aa22.38■■□□□ 1.17
ATPAF2-201ENST00000444058 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.38■■□□□ 1.17
ATPAF2-201ENST00000444058 IVNS1ABPQ9Y6Y0 642 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms