RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 COG2Q14746 738 aa23.99■■□□□ 1.43
LRCH3-208ENST00000443727 ZMYM1Q5SVZ6 1142 aa23.99■■□□□ 1.43
LRCH3-208ENST00000443727 PLEKHH3Q7Z736 793 aa23.99■■□□□ 1.43
LRCH3-208ENST00000443727 SPICE1Q8N0Z3 855 aa23.99■■□□□ 1.43
LRCH3-208ENST00000443727 EVI5LQ96CN4 794 aa23.99■■□□□ 1.43
LRCH3-208ENST00000443727 LNPKQ9C0E8 428 aa23.99■■□□□ 1.43
LRCH3-208ENST00000443727 ZNF287Q9HBT7 754 aa23.99■■□□□ 1.43
LRCH3-208ENST00000443727 EPB41L4AQ9HCS5 686 aaPredicted RBP23.99■■□□□ 1.43
LRCH3-208ENST00000443727 HOXC10Q9NYD6 342 aa23.99■■□□□ 1.43
LRCH3-208ENST00000443727 MYH8P13535 1937 aa23.99■■□□□ 1.43
LRCH3-208ENST00000443727 SPDYE16A6NNV3 312 aaPredicted RBP23.98■■□□□ 1.43
LRCH3-208ENST00000443727 RAD21O60216 631 aa23.98■■□□□ 1.43
LRCH3-208ENST00000443727 HMGCRP04035 888 aa23.98■■□□□ 1.43
LRCH3-208ENST00000443727 EEF2P13639 858 aaKnown RBP23.98■■□□□ 1.43
LRCH3-208ENST00000443727 GJA8P48165 433 aa23.98■■□□□ 1.43
LRCH3-208ENST00000443727 POTEEQ6S8J3 1075 aa23.98■■□□□ 1.43
LRCH3-208ENST00000443727 LBX2Q6XYB7 198 aa23.98■■□□□ 1.43
LRCH3-208ENST00000443727 GPR142Q7Z601 462 aa23.98■■□□□ 1.43
LRCH3-208ENST00000443727 SIAH1Q8IUQ4 282 aa23.98■■□□□ 1.43
LRCH3-208ENST00000443727 IFNL3Q8IZI9 196 aa23.98■■□□□ 1.43
LRCH3-208ENST00000443727 VCPKMTQ9H867 229 aa23.98■■□□□ 1.43
LRCH3-208ENST00000443727 SUPT16HQ9Y5B9 1047 aaKnown RBP23.98■■□□□ 1.43
LRCH3-208ENST00000443727 CNMDO75829 334 aa23.97■■□□□ 1.43
LRCH3-208ENST00000443727 SAMD1Q6SPF0 538 aaPredicted RBP23.97■■□□□ 1.43
LRCH3-208ENST00000443727 DOCK3Q8IZD9 2030 aa23.97■■□□□ 1.43
LRCH3-208ENST00000443727 U2AF1L4Q8WU68 220 aaKnown RBP23.97■■□□□ 1.43
LRCH3-208ENST00000443727 NAPBQ9H115 298 aa23.97■■□□□ 1.43
LRCH3-208ENST00000443727 GOPCQ9HD26 462 aa23.97■■□□□ 1.43
LRCH3-208ENST00000443727 FLOT1O75955 427 aa23.96■■□□□ 1.43
LRCH3-208ENST00000443727 SLC3A2P08195 630 aaKnown RBP23.96■■□□□ 1.43
LRCH3-208ENST00000443727 RASA1P20936 1047 aa23.96■■□□□ 1.43
LRCH3-208ENST00000443727 RGS2P41220 211 aa23.96■■□□□ 1.43
LRCH3-208ENST00000443727 KIAA1755Q5JYT7 1200 aa23.96■■□□□ 1.43
LRCH3-208ENST00000443727 SHISA4Q96DD7 197 aa23.96■■□□□ 1.43
LRCH3-208ENST00000443727 BTBD7Q9P203 1132 aa23.96■■□□□ 1.43
LRCH3-208ENST00000443727 BRCA2P51587 3418 aa23.96■■□□□ 1.43
LRCH3-208ENST00000443727 ROBO3Q96MS0 1386 aa23.95■■□□□ 1.42
LRCH3-208ENST00000443727 TFRCP02786 760 aaKnown RBP23.95■■□□□ 1.42
LRCH3-208ENST00000443727 SMC5Q8IY18 1101 aa23.95■■□□□ 1.42
LRCH3-208ENST00000443727 TRMT44Q8IYL2 757 aaKnown RBP23.95■■□□□ 1.42
LRCH3-208ENST00000443727 ZNF444Q8N0Y2 327 aaPredicted RBP23.95■■□□□ 1.42
LRCH3-208ENST00000443727 DEFB118Q96PH6 123 aa23.95■■□□□ 1.42
LRCH3-208ENST00000443727 IVNS1ABPQ9Y6Y0 642 aa23.95■■□□□ 1.42
LRCH3-208ENST00000443727 WDR46O15213 610 aaKnown RBP23.94■■□□□ 1.42
LRCH3-208ENST00000443727 PRDM1O75626 825 aa23.94■■□□□ 1.42
LRCH3-208ENST00000443727 SGPL1O95470 568 aa23.94■■□□□ 1.42
LRCH3-208ENST00000443727 XRCC5P13010 732 aaKnown RBP23.94■■□□□ 1.42
LRCH3-208ENST00000443727 ZKSCAN1P17029 563 aaPredicted RBP23.94■■□□□ 1.42
LRCH3-208ENST00000443727 TRIM6-TRIM34B2RNG4 842 aa23.93■■□□□ 1.42
LRCH3-208ENST00000443727 IGHDP01880 384 aa23.93■■□□□ 1.42
LRCH3-208ENST00000443727 PDE4BQ07343 736 aa23.93■■□□□ 1.42
LRCH3-208ENST00000443727 MORN1Q5T089 497 aa23.93■■□□□ 1.42
LRCH3-208ENST00000443727 CCDC129Q6ZRS4 1044 aa23.93■■□□□ 1.42
LRCH3-208ENST00000443727 CHD1LQ86WJ1 897 aa23.93■■□□□ 1.42
LRCH3-208ENST00000443727 MB21D1Q8N884 522 aa23.93■■□□□ 1.42
LRCH3-208ENST00000443727 TRIB2Q92519 343 aa23.93■■□□□ 1.42
LRCH3-208ENST00000443727 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.93■■□□□ 1.42
LRCH3-208ENST00000443727 HMX1Q9NP08 348 aaPredicted RBP23.93■■□□□ 1.42
LRCH3-208ENST00000443727 DSG3P32926 999 aa23.92■■□□□ 1.42
LRCH3-208ENST00000443727 TRIM32Q13049 653 aa23.92■■□□□ 1.42
LRCH3-208ENST00000443727 PLS1Q14651 629 aa23.92■■□□□ 1.42
LRCH3-208ENST00000443727 APBA2Q99767 749 aa23.92■■□□□ 1.42
LRCH3-208ENST00000443727 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.92■■□□□ 1.42
LRCH3-208ENST00000443727 PAK6Q9NQU5 681 aaPredicted RBP23.92■■□□□ 1.42
LRCH3-208ENST00000443727 RPTORQ8N122 1335 aa23.91■■□□□ 1.42
LRCH3-208ENST00000443727 SLC15A5A6NIM6 579 aa23.91■■□□□ 1.42
LRCH3-208ENST00000443727 FARP2O94887 1054 aaPredicted RBP23.91■■□□□ 1.42
LRCH3-208ENST00000443727 PPARAQ07869 468 aa23.91■■□□□ 1.42
LRCH3-208ENST00000443727 MAP2K5Q13163 448 aa23.91■■□□□ 1.42
LRCH3-208ENST00000443727 USP6NLQ92738 828 aa23.91■■□□□ 1.42
LRCH3-208ENST00000443727 RILPL2Q969X0 211 aa23.91■■□□□ 1.42
LRCH3-208ENST00000443727 HELLSQ9NRZ9 838 aa23.91■■□□□ 1.42
LRCH3-208ENST00000443727 PRKAR2AP13861 404 aaKnown RBP23.9■■□□□ 1.42
LRCH3-208ENST00000443727 CAPN2P17655 700 aa23.9■■□□□ 1.42
LRCH3-208ENST00000443727 PTPREP23469 700 aa23.9■■□□□ 1.42
LRCH3-208ENST00000443727 NUCB1Q02818 461 aa23.9■■□□□ 1.42
LRCH3-208ENST00000443727 ATG4CQ96DT6 458 aa23.9■■□□□ 1.42
LRCH3-208ENST00000443727 MOV10L1Q9BXT6 1211 aaKnown RBP23.9■■□□□ 1.42
LRCH3-208ENST00000443727 SPATC1LQ9H0A9 340 aa23.9■■□□□ 1.42
LRCH3-208ENST00000443727 NYAP2Q9P242 653 aa23.9■■□□□ 1.42
LRCH3-208ENST00000443727 CLIP2Q9UDT6 1046 aa23.9■■□□□ 1.42
LRCH3-208ENST00000443727 MKI67P46013 3256 aaKnown RBP23.9■■□□□ 1.42
LRCH3-208ENST00000443727 TSPY3P0CV98 308 aa23.89■■□□□ 1.41
LRCH3-208ENST00000443727 TSPY8P0CW00 308 aa23.89■■□□□ 1.41
LRCH3-208ENST00000443727 FAM83BQ5T0W9 1011 aa23.89■■□□□ 1.41
LRCH3-208ENST00000443727 CCL14Q16627 93 aa23.88■■□□□ 1.41
LRCH3-208ENST00000443727 TICAM2Q86XR7 235 aa23.88■■□□□ 1.41
LRCH3-208ENST00000443727 DPF3Q92784 378 aa23.88■■□□□ 1.41
LRCH3-208ENST00000443727 HTATIP2Q9BUP3 242 aa23.88■■□□□ 1.41
LRCH3-208ENST00000443727 PLXNB2O15031 1838 aa23.87■■□□□ 1.41
LRCH3-208ENST00000443727 ERCC3P19447 782 aa23.87■■□□□ 1.41
LRCH3-208ENST00000443727 MCMDC2Q4G0Z9 681 aa23.87■■□□□ 1.41
LRCH3-208ENST00000443727 NCAPG2Q86XI2 1143 aa23.87■■□□□ 1.41
LRCH3-208ENST00000443727 SHCBP1Q8NEM2 672 aa23.87■■□□□ 1.41
LRCH3-208ENST00000443727 FAM227BQ96M60 508 aa23.87■■□□□ 1.41
LRCH3-208ENST00000443727 FBXO28Q9NVF7 368 aa23.87■■□□□ 1.41
LRCH3-208ENST00000443727 F5H6K3 240 aa23.86■■□□□ 1.41
LRCH3-208ENST00000443727 TFAP4Q01664 338 aa23.86■■□□□ 1.41
LRCH3-208ENST00000443727 KLRC3Q07444 240 aa23.86■■□□□ 1.41
LRCH3-208ENST00000443727 GRB14Q14449 540 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms