RNA–Protein interactions for RNA: ENST00000440915.1

AP004290.1-201, humanhuman

BASIC

Gene AP004290.1, Length 1,412 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004290.1-201ENST00000440915 SCYL3Q8IZE3 742 aa12.02□□□□□ -0.49
AP004290.1-201ENST00000440915 LRRC47Q8N1G4 583 aaKnown RBP12.02□□□□□ -0.49
AP004290.1-201ENST00000440915 FANCBQ8NB91 859 aa12.02□□□□□ -0.49
AP004290.1-201ENST00000440915 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.02□□□□□ -0.49
AP004290.1-201ENST00000440915 CHMP4CQ96CF2 233 aa12.02□□□□□ -0.49
AP004290.1-201ENST00000440915 FAM217BQ9NTX9 383 aaPredicted RBP12.02□□□□□ -0.49
AP004290.1-201ENST00000440915 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.02□□□□□ -0.49
AP004290.1-201ENST00000440915 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.02□□□□□ -0.49
AP004290.1-201ENST00000440915 ATAD5Q96QE3 1844 aa12.01□□□□□ -0.49
AP004290.1-201ENST00000440915 TRAF5O00463 557 aa12.01□□□□□ -0.49
AP004290.1-201ENST00000440915 DHX16O60231 1041 aaKnown RBP12.01□□□□□ -0.49
AP004290.1-201ENST00000440915 PPP1R12BO60237 982 aaPredicted RBP12.01□□□□□ -0.49
AP004290.1-201ENST00000440915 CTDNEP1O95476 244 aa12.01□□□□□ -0.49
AP004290.1-201ENST00000440915 ADD1P35611 737 aaKnown RBP12.01□□□□□ -0.49
AP004290.1-201ENST00000440915 ZKSCAN4Q969J2 545 aaPredicted RBP12.01□□□□□ -0.49
AP004290.1-201ENST00000440915 MAP3K14Q99558 947 aa12.01□□□□□ -0.49
AP004290.1-201ENST00000440915 LLPHQ9BRT6 129 aaKnown RBP12.01□□□□□ -0.49
AP004290.1-201ENST00000440915 A0A1W2PRG0 241 aa12□□□□□ -0.49
AP004290.1-201ENST00000440915 USP17L5A8MUK1 530 aa12□□□□□ -0.49
AP004290.1-201ENST00000440915 DTNBO60941 627 aa12□□□□□ -0.49
AP004290.1-201ENST00000440915 MAP3K9P80192 1104 aa12□□□□□ -0.49
AP004290.1-201ENST00000440915 FMR1Q06787 632 aaKnown RBP eCLIP12□□□□□ -0.49
AP004290.1-201ENST00000440915 GRM4Q14833 912 aa12□□□□□ -0.49
AP004290.1-201ENST00000440915 PPP2R5BQ15173 497 aa12□□□□□ -0.49
AP004290.1-201ENST00000440915 NOL9Q5SY16 702 aaKnown RBP12□□□□□ -0.49
AP004290.1-201ENST00000440915 CCDC84Q86UT8 332 aaPredicted RBP12□□□□□ -0.49
AP004290.1-201ENST00000440915 SMARCC2Q8TAQ2 1214 aa12□□□□□ -0.49
AP004290.1-201ENST00000440915 ACER1Q8TDN7 264 aa12□□□□□ -0.49
AP004290.1-201ENST00000440915 GPBP1L1Q9HC44 474 aaPredicted RBP12□□□□□ -0.49
AP004290.1-201ENST00000440915 ARHGEF10LQ9HCE6 1279 aa12□□□□□ -0.49
AP004290.1-201ENST00000440915 RBM28Q9NW13 759 aaKnown RBP12□□□□□ -0.49
AP004290.1-201ENST00000440915 SMC3Q9UQE7 1217 aa12□□□□□ -0.49
AP004290.1-201ENST00000440915 MTMR7Q9Y216 660 aa12□□□□□ -0.49
AP004290.1-201ENST00000440915 DOCK1Q14185 1865 aa12□□□□□ -0.49
AP004290.1-201ENST00000440915 MYH4Q9Y623 1939 aa11.99□□□□□ -0.49
AP004290.1-201ENST00000440915 PAPPA2Q9BXP8 1791 aa11.99□□□□□ -0.49
AP004290.1-201ENST00000440915 CCDC196A0A1B0GTZ2 297 aa11.99□□□□□ -0.49
AP004290.1-201ENST00000440915 CPLX1O14810 134 aa11.99□□□□□ -0.49
AP004290.1-201ENST00000440915 JAK2O60674 1132 aa11.99□□□□□ -0.49
AP004290.1-201ENST00000440915 KIF5BP33176 963 aa11.99□□□□□ -0.49
AP004290.1-201ENST00000440915 ECE1P42892 770 aa11.99□□□□□ -0.49
AP004290.1-201ENST00000440915 IREB2P48200 963 aaKnown RBP11.99□□□□□ -0.49
AP004290.1-201ENST00000440915 NTRK3Q16288 839 aa11.99□□□□□ -0.49
AP004290.1-201ENST00000440915 MAP3K11Q16584 847 aa11.99□□□□□ -0.49
AP004290.1-201ENST00000440915 CHADLQ6NUI6 762 aa11.99□□□□□ -0.49
AP004290.1-201ENST00000440915 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.99□□□□□ -0.49
AP004290.1-201ENST00000440915 MOB2Q70IA6 237 aa11.99□□□□□ -0.49
AP004290.1-201ENST00000440915 RASGRP2Q7LDG7 609 aa11.99□□□□□ -0.49
AP004290.1-201ENST00000440915 NSUN7Q8NE18 718 aaKnown RBP11.99□□□□□ -0.49
AP004290.1-201ENST00000440915 CTCFLQ8NI51 663 aaPredicted RBP11.99□□□□□ -0.49
AP004290.1-201ENST00000440915 PICK1Q9NRD5 415 aa11.99□□□□□ -0.49
AP004290.1-201ENST00000440915 MAD2L2Q9UI95 211 aa11.99□□□□□ -0.49
AP004290.1-201ENST00000440915 SYNPO2Q9UMS6 1093 aa11.99□□□□□ -0.49
AP004290.1-201ENST00000440915 TMX2Q9Y320 296 aa11.99□□□□□ -0.49
AP004290.1-201ENST00000440915 PTPDC1A2A3K4 754 aa11.98□□□□□ -0.49
AP004290.1-201ENST00000440915 PALM3A6NDB9 673 aaPredicted RBP11.98□□□□□ -0.49
AP004290.1-201ENST00000440915 F5H6K3 240 aa11.98□□□□□ -0.49
AP004290.1-201ENST00000440915 PARP1P09874 1014 aaKnown RBP11.98□□□□□ -0.49
AP004290.1-201ENST00000440915 SNHG28P0DPA3 235 aa11.98□□□□□ -0.49
AP004290.1-201ENST00000440915 PDHBP11177 359 aa11.98□□□□□ -0.49
AP004290.1-201ENST00000440915 PTPRAP18433 802 aa11.98□□□□□ -0.49
AP004290.1-201ENST00000440915 GJB2P29033 226 aa11.98□□□□□ -0.49
AP004290.1-201ENST00000440915 KLRC3Q07444 240 aa11.98□□□□□ -0.49
AP004290.1-201ENST00000440915 VGLL4Q14135 290 aa11.98□□□□□ -0.49
AP004290.1-201ENST00000440915 TTLL12Q14166 644 aaPredicted RBP11.98□□□□□ -0.49
AP004290.1-201ENST00000440915 CPLX2Q6PUV4 134 aaKnown RBP11.98□□□□□ -0.49
AP004290.1-201ENST00000440915 USP17L2Q6R6M4 530 aa11.98□□□□□ -0.49
AP004290.1-201ENST00000440915 TMTC3Q6ZXV5 915 aa11.98□□□□□ -0.49
AP004290.1-201ENST00000440915 ARMC9Q7Z3E5 817 aa11.98□□□□□ -0.49
AP004290.1-201ENST00000440915 CMTR1Q8N1G2 835 aaKnown RBP11.98□□□□□ -0.49
AP004290.1-201ENST00000440915 STAG2Q8N3U4 1231 aa11.98□□□□□ -0.49
AP004290.1-201ENST00000440915 GMCL1P1Q8NEA9 526 aa11.98□□□□□ -0.49
AP004290.1-201ENST00000440915 ZNF408Q9H9D4 720 aa11.98□□□□□ -0.49
AP004290.1-201ENST00000440915 CWC22Q9HCG8 908 aaKnown RBP11.98□□□□□ -0.49
AP004290.1-201ENST00000440915 CSADQ9Y600 493 aa11.98□□□□□ -0.49
AP004290.1-201ENST00000440915 PPFIA3O75145 1194 aa11.97□□□□□ -0.49
AP004290.1-201ENST00000440915 CDKL5O76039 1030 aa11.97□□□□□ -0.49
AP004290.1-201ENST00000440915 PLEKHA8P1O95397 391 aa11.97□□□□□ -0.49
AP004290.1-201ENST00000440915 ITGBL1O95965 494 aaPredicted RBP11.97□□□□□ -0.49
AP004290.1-201ENST00000440915 GOLGA8HP0CJ92 632 aa11.97□□□□□ -0.49
AP004290.1-201ENST00000440915 IFNAR1P17181 557 aa11.97□□□□□ -0.49
AP004290.1-201ENST00000440915 DDIT3P35638 169 aa11.97□□□□□ -0.49
AP004290.1-201ENST00000440915 GNAQP50148 359 aa11.97□□□□□ -0.49
AP004290.1-201ENST00000440915 SLFN13Q68D06 897 aa11.97□□□□□ -0.49
AP004290.1-201ENST00000440915 ANKRD13AQ8IZ07 590 aa11.97□□□□□ -0.49
AP004290.1-201ENST00000440915 SRBD1Q8N5C6 995 aaKnown RBP11.97□□□□□ -0.49
AP004290.1-201ENST00000440915 DDX11Q96FC9 970 aa11.97□□□□□ -0.49
AP004290.1-201ENST00000440915 WDR18Q9BV38 432 aa11.97□□□□□ -0.49
AP004290.1-201ENST00000440915 SH2D4AQ9H788 454 aa11.97□□□□□ -0.49
AP004290.1-201ENST00000440915 AS3MTQ9HBK9 375 aa11.97□□□□□ -0.49
AP004290.1-201ENST00000440915 GOPCQ9HD26 462 aa11.97□□□□□ -0.49
AP004290.1-201ENST00000440915 SNCAIPQ9Y6H5 919 aa11.97□□□□□ -0.49
AP004290.1-201ENST00000440915 OTOFQ9HC10 1997 aa11.97□□□□□ -0.49
AP004290.1-201ENST00000440915 FRMPD2Q68DX3 1309 aaPredicted RBP11.97□□□□□ -0.49
AP004290.1-201ENST00000440915 KLRF2D3W0D1 207 aa11.96□□□□□ -0.49
AP004290.1-201ENST00000440915 UBE2Q2LH0YL09 131 aa11.96□□□□□ -0.49
AP004290.1-201ENST00000440915 KIF3CO14782 793 aa11.96□□□□□ -0.49
AP004290.1-201ENST00000440915 RAD21O60216 631 aa11.96□□□□□ -0.49
AP004290.1-201ENST00000440915 NDUFB10O96000 172 aa11.96□□□□□ -0.49
AP004290.1-201ENST00000440915 FDPSP14324 419 aaKnown RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms