RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 BACH1O14867 736 aa11.22□□□□□ -0.61
CDC42SE1-202ENST00000439374 GNPATO15228 680 aa11.22□□□□□ -0.61
CDC42SE1-202ENST00000439374 CCP110O43303 1012 aa11.22□□□□□ -0.61
CDC42SE1-202ENST00000439374 GOLGA8HP0CJ92 632 aa11.22□□□□□ -0.61
CDC42SE1-202ENST00000439374 CXCR5P32302 372 aa11.22□□□□□ -0.61
CDC42SE1-202ENST00000439374 PTF1AQ7RTS3 328 aa11.22□□□□□ -0.61
CDC42SE1-202ENST00000439374 ANKRD13CQ8N6S4 541 aa11.22□□□□□ -0.61
CDC42SE1-202ENST00000439374 WASF1Q92558 559 aa11.22□□□□□ -0.61
CDC42SE1-202ENST00000439374 GPKOWQ92917 476 aaPredicted RBP eCLIP11.22□□□□□ -0.615e-8■■□□□ 14
CDC42SE1-202ENST00000439374 SOS2Q07890 1332 aaPredicted RBP11.22□□□□□ -0.61
CDC42SE1-202ENST00000439374 CCDC196A0A1B0GTZ2 297 aa11.22□□□□□ -0.61
CDC42SE1-202ENST00000439374 TXLNAP40222 546 aa11.22□□□□□ -0.61
CDC42SE1-202ENST00000439374 RAD9BQ6WBX8 426 aa11.22□□□□□ -0.61
CDC42SE1-202ENST00000439374 VSTM4Q8IW00 320 aa11.22□□□□□ -0.61
CDC42SE1-202ENST00000439374 NOC3LQ8WTT2 800 aaKnown RBP11.22□□□□□ -0.61
CDC42SE1-202ENST00000439374 CSRNP2Q9H175 543 aa11.22□□□□□ -0.61
CDC42SE1-202ENST00000439374 RNF41Q9H4P4 317 aaPredicted RBP11.22□□□□□ -0.61
CDC42SE1-202ENST00000439374 BRMS1Q9HCU9 246 aa11.22□□□□□ -0.61
CDC42SE1-202ENST00000439374 CAMTA1Q9Y6Y1 1673 aa11.22□□□□□ -0.61
CDC42SE1-202ENST00000439374 CACNA1FO60840 1977 aa11.22□□□□□ -0.61
CDC42SE1-202ENST00000439374 MROH5Q6ZUA9 1318 aa11.22□□□□□ -0.61
CDC42SE1-202ENST00000439374 CTAGE9A4FU28 777 aa11.22□□□□□ -0.61
CDC42SE1-202ENST00000439374 TRIM75PA6NK02 468 aa11.22□□□□□ -0.61
CDC42SE1-202ENST00000439374 IL6STP40189 918 aaPredicted RBP11.22□□□□□ -0.61
CDC42SE1-202ENST00000439374 SLC7A5Q01650 507 aa11.22□□□□□ -0.61
CDC42SE1-202ENST00000439374 CASP8Q14790 479 aa11.22□□□□□ -0.61
CDC42SE1-202ENST00000439374 SPECC1LQ69YQ0 1117 aa11.22□□□□□ -0.61
CDC42SE1-202ENST00000439374 METTL16Q86W50 562 aaKnown RBP11.22□□□□□ -0.61
CDC42SE1-202ENST00000439374 CNNM2Q9H8M5 875 aa11.22□□□□□ -0.61
CDC42SE1-202ENST00000439374 ZNF219Q9P2Y4 722 aaPredicted RBP11.22□□□□□ -0.61
CDC42SE1-202ENST00000439374 ZNF652Q9Y2D9 606 aa11.22□□□□□ -0.61
CDC42SE1-202ENST00000439374 MED1Q15648 1581 aaPredicted RBP11.22□□□□□ -0.61
CDC42SE1-202ENST00000439374 TPM1P09493 284 aa11.21□□□□□ -0.61
CDC42SE1-202ENST00000439374 PRDX5P30044 214 aa11.21□□□□□ -0.61
CDC42SE1-202ENST00000439374 EIF6P56537 245 aaKnown RBP11.21□□□□□ -0.61
CDC42SE1-202ENST00000439374 MAP9Q49MG5 647 aa11.21□□□□□ -0.61
CDC42SE1-202ENST00000439374 CCDC93Q567U6 631 aa11.21□□□□□ -0.61
CDC42SE1-202ENST00000439374 HDXQ7Z353 690 aa11.21□□□□□ -0.61
CDC42SE1-202ENST00000439374 KIAA1328Q86T90 577 aa11.21□□□□□ -0.61
CDC42SE1-202ENST00000439374 INTS13Q9NVM9 706 aa11.21□□□□□ -0.61
CDC42SE1-202ENST00000439374 CTNND2Q9UQB3 1225 aa11.21□□□□□ -0.61
CDC42SE1-202ENST00000439374 AKR1B15C9JRZ8 316 aaPredicted RBP11.21□□□□□ -0.62
CDC42SE1-202ENST00000439374 RNF40O75150 1001 aa11.21□□□□□ -0.62
CDC42SE1-202ENST00000439374 TRIM28Q13263 835 aaKnown RBP11.21□□□□□ -0.62
CDC42SE1-202ENST00000439374 GOLGA5Q8TBA6 731 aa11.21□□□□□ -0.62
CDC42SE1-202ENST00000439374 SETDB2Q96T68 719 aa11.21□□□□□ -0.62
CDC42SE1-202ENST00000439374 A0A1W2PQ27 194 aa11.21□□□□□ -0.62
CDC42SE1-202ENST00000439374 A0A1W2PQ64 194 aa11.21□□□□□ -0.62
CDC42SE1-202ENST00000439374 A0A1W2PQD8 194 aa11.21□□□□□ -0.62
CDC42SE1-202ENST00000439374 POSTNQ15063 836 aa11.21□□□□□ -0.62
CDC42SE1-202ENST00000439374 DYNLL2Q96FJ2 89 aa11.21□□□□□ -0.62
CDC42SE1-202ENST00000439374 MRFAP1Q9Y605 127 aa11.21□□□□□ -0.62
CDC42SE1-202ENST00000439374 ZNF185O15231 689 aa11.2□□□□□ -0.62
CDC42SE1-202ENST00000439374 MARCH6O60337 910 aa11.2□□□□□ -0.62
CDC42SE1-202ENST00000439374 NKX1-1Q15270 411 aaPredicted RBP11.2□□□□□ -0.62
CDC42SE1-202ENST00000439374 DIXDC1Q155Q3 683 aa11.2□□□□□ -0.62
CDC42SE1-202ENST00000439374 ATL3Q6DD88 541 aa11.2□□□□□ -0.62
CDC42SE1-202ENST00000439374 KSR1Q8IVT5 923 aa11.2□□□□□ -0.62
CDC42SE1-202ENST00000439374 NLRP3Q96P20 1036 aa11.2□□□□□ -0.62
CDC42SE1-202ENST00000439374 TACC3Q9Y6A5 838 aa11.2□□□□□ -0.62
CDC42SE1-202ENST00000439374 HGSO14964 777 aaPredicted RBP11.2□□□□□ -0.62
CDC42SE1-202ENST00000439374 CYP27A1Q02318 531 aa11.2□□□□□ -0.62
CDC42SE1-202ENST00000439374 HEATR3Q7Z4Q2 680 aa11.2□□□□□ -0.62
CDC42SE1-202ENST00000439374 KIRREL3Q8IZU9 778 aa11.2□□□□□ -0.62
CDC42SE1-202ENST00000439374 TC2NQ8N9U0 490 aa11.2□□□□□ -0.62
CDC42SE1-202ENST00000439374 PROCA1Q8NCQ7 364 aaPredicted RBP11.2□□□□□ -0.62
CDC42SE1-202ENST00000439374 LRRIQ3A6PVS8 624 aaPredicted RBP11.19□□□□□ -0.62
CDC42SE1-202ENST00000439374 DEXIO95424 95 aa11.19□□□□□ -0.62
CDC42SE1-202ENST00000439374 USP17L8P0C7I0 530 aa11.19□□□□□ -0.62
CDC42SE1-202ENST00000439374 RRAGBQ5VZM2 374 aa11.19□□□□□ -0.62
CDC42SE1-202ENST00000439374 AGXT2Q9BYV1 514 aa11.19□□□□□ -0.62
CDC42SE1-202ENST00000439374 PHLPP2Q6ZVD8 1323 aa11.19□□□□□ -0.62
CDC42SE1-202ENST00000439374 BMP6P22004 513 aa11.19□□□□□ -0.62
CDC42SE1-202ENST00000439374 CRACR2BQ8N4Y2 399 aaPredicted RBP11.19□□□□□ -0.62
CDC42SE1-202ENST00000439374 MARCH10Q8NA82 808 aaPredicted RBP11.19□□□□□ -0.62
CDC42SE1-202ENST00000439374 SLC44A5Q8NCS7 719 aa11.19□□□□□ -0.62
CDC42SE1-202ENST00000439374 MAN1B1Q9UKM7 699 aa11.19□□□□□ -0.62
CDC42SE1-202ENST00000439374 LRRC37A3O60309 1634 aa11.19□□□□□ -0.62
CDC42SE1-202ENST00000439374 EIF4E1BA6NMX2 242 aaKnown RBP11.19□□□□□ -0.62
CDC42SE1-202ENST00000439374 TULP2O00295 520 aa11.19□□□□□ -0.62
CDC42SE1-202ENST00000439374 CUTAO60888 179 aa11.19□□□□□ -0.62
CDC42SE1-202ENST00000439374 VEGFAP15692 232 aaPredicted RBP11.19□□□□□ -0.62
CDC42SE1-202ENST00000439374 MAPKAPK5Q8IW41 473 aa11.19□□□□□ -0.62
CDC42SE1-202ENST00000439374 RUFY1Q96T51 708 aa11.19□□□□□ -0.62
CDC42SE1-202ENST00000439374 FAM217BQ9NTX9 383 aaPredicted RBP11.19□□□□□ -0.62
CDC42SE1-202ENST00000439374 EHD2Q9NZN4 543 aa11.19□□□□□ -0.62
CDC42SE1-202ENST00000439374 BCCIPQ9P287 314 aaKnown RBP eCLIP11.19□□□□□ -0.62
CDC42SE1-202ENST00000439374 SALL1Q9NSC2 1324 aa11.19□□□□□ -0.62
CDC42SE1-202ENST00000439374 G3V3G9 751 aa11.18□□□□□ -0.62
CDC42SE1-202ENST00000439374 MMP1P03956 469 aa11.18□□□□□ -0.62
CDC42SE1-202ENST00000439374 PICALMQ13492 652 aa11.18□□□□□ -0.62
CDC42SE1-202ENST00000439374 FILIP1LQ4L180 1135 aa11.18□□□□□ -0.62
CDC42SE1-202ENST00000439374 DCAF8Q5TAQ9 597 aa11.18□□□□□ -0.62
CDC42SE1-202ENST00000439374 ICE2Q659A1 982 aa11.18□□□□□ -0.62
CDC42SE1-202ENST00000439374 SRGAP1Q7Z6B7 1085 aa11.18□□□□□ -0.62
CDC42SE1-202ENST00000439374 CEP57Q86XR8 500 aa11.18□□□□□ -0.62
CDC42SE1-202ENST00000439374 SMCR8Q8TEV9 937 aaPredicted RBP11.18□□□□□ -0.62
CDC42SE1-202ENST00000439374 RABGGTAQ92696 567 aa11.18□□□□□ -0.62
CDC42SE1-202ENST00000439374 CPDO75976 1380 aa11.18□□□□□ -0.62
CDC42SE1-202ENST00000439374 HIBADHP31937 336 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms