RNA–Protein interactions for RNA: ENST00000437737.3

LINC01088-201, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 5 BASIC

Gene LINC01088, Length 973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-201ENST00000437737 PIH1D3Q9NQM4 214 aaKnown RBP17.15■□□□□ 0.34
LINC01088-201ENST00000437737 PRUNE2Q8WUY3 3088 aa17.15■□□□□ 0.34
LINC01088-201ENST00000437737 A0A0G2JMZ2 1700 aa17.14■□□□□ 0.33
LINC01088-201ENST00000437737 TNFRSF10AO00220 468 aa17.14■□□□□ 0.33
LINC01088-201ENST00000437737 IGSF3O75054 1194 aa17.14■□□□□ 0.33
LINC01088-201ENST00000437737 GNAI2P04899 355 aa17.14■□□□□ 0.33
LINC01088-201ENST00000437737 CLTBP09497 229 aa17.14■□□□□ 0.33
LINC01088-201ENST00000437737 ERCC3P19447 782 aa17.14■□□□□ 0.33
LINC01088-201ENST00000437737 OS9Q13438 667 aaPredicted RBP17.14■□□□□ 0.33
LINC01088-201ENST00000437737 TNNI3KQ59H18 835 aa17.14■□□□□ 0.33
LINC01088-201ENST00000437737 FAM47AQ5JRC9 791 aa17.14■□□□□ 0.33
LINC01088-201ENST00000437737 PRAMEF19Q5SWL8 479 aa17.14■□□□□ 0.33
LINC01088-201ENST00000437737 C1orf53Q5VUE5 145 aa17.14■□□□□ 0.33
LINC01088-201ENST00000437737 TANGO6Q9C0B7 1094 aa17.14■□□□□ 0.33
LINC01088-201ENST00000437737 TACC3Q9Y6A5 838 aa17.14■□□□□ 0.33
LINC01088-201ENST00000437737 FPGT-TNNI3KV9GXZ4 949 aa17.14■□□□□ 0.33
LINC01088-201ENST00000437737 COBLO75128 1261 aa17.13■□□□□ 0.33
LINC01088-201ENST00000437737 IDH1O75874 414 aaKnown RBP17.13■□□□□ 0.33
LINC01088-201ENST00000437737 RAG1P15918 1043 aa17.13■□□□□ 0.33
LINC01088-201ENST00000437737 PLS1Q14651 629 aa17.13■□□□□ 0.33
LINC01088-201ENST00000437737 COG2Q14746 738 aa17.13■□□□□ 0.33
LINC01088-201ENST00000437737 GRIN2CQ14957 1233 aa17.13■□□□□ 0.33
LINC01088-201ENST00000437737 CERS3Q8IU89 383 aa17.13■□□□□ 0.33
LINC01088-201ENST00000437737 TRMT2AQ8IZ69 625 aaKnown RBP17.13■□□□□ 0.33
LINC01088-201ENST00000437737 SHCBP1Q8NEM2 672 aa17.13■□□□□ 0.33
LINC01088-201ENST00000437737 SPATC1LQ9H0A9 340 aa17.13■□□□□ 0.33
LINC01088-201ENST00000437737 GPR108Q9NPR9 543 aa17.13■□□□□ 0.33
LINC01088-201ENST00000437737 HOXC10Q9NYD6 342 aa17.13■□□□□ 0.33
LINC01088-201ENST00000437737 CDH23Q9H251 3354 aa17.13■□□□□ 0.33
LINC01088-201ENST00000437737 ZNFX1Q9P2E3 1918 aaKnown RBP17.13■□□□□ 0.33
LINC01088-201ENST00000437737 TTC28Q96AY4 2481 aa17.12■□□□□ 0.33
LINC01088-201ENST00000437737 NAV1Q8NEY1 1877 aa17.12■□□□□ 0.33
LINC01088-201ENST00000437737 ITGB8P26012 769 aa17.12■□□□□ 0.33
LINC01088-201ENST00000437737 EPHB4P54760 987 aa17.12■□□□□ 0.33
LINC01088-201ENST00000437737 FPGSQ05932 587 aa17.12■□□□□ 0.33
LINC01088-201ENST00000437737 NCAPG2Q86XI2 1143 aa17.12■□□□□ 0.33
LINC01088-201ENST00000437737 USP38Q8NB14 1042 aa17.12■□□□□ 0.33
LINC01088-201ENST00000437737 XPNPEP3Q9NQH7 507 aa17.12■□□□□ 0.33
LINC01088-201ENST00000437737 SMCHD1A6NHR9 2005 aa17.12■□□□□ 0.33
LINC01088-201ENST00000437737 MPHOSPH10O00566 681 aaKnown RBP17.11■□□□□ 0.33
LINC01088-201ENST00000437737 PQBP1O60828 265 aaKnown RBP17.11■□□□□ 0.33
LINC01088-201ENST00000437737 RARBP10826 455 aa17.11■□□□□ 0.33
LINC01088-201ENST00000437737 DNAJB2P25686 324 aa17.11■□□□□ 0.33
LINC01088-201ENST00000437737 SHMT1P34896 483 aa17.11■□□□□ 0.33
LINC01088-201ENST00000437737 SEPT2Q15019 361 aa17.11■□□□□ 0.33
LINC01088-201ENST00000437737 MAGEB6Q8N7X4 407 aa17.11■□□□□ 0.33
LINC01088-201ENST00000437737 ARHGAP45Q92619 1136 aa17.11■□□□□ 0.33
LINC01088-201ENST00000437737 ZNF512BQ96KM6 892 aaPredicted RBP17.11■□□□□ 0.33
LINC01088-201ENST00000437737 MROH8Q9H579 483 aa17.11■□□□□ 0.33
LINC01088-201ENST00000437737 PHF24Q9UPV7 400 aa17.11■□□□□ 0.33
LINC01088-201ENST00000437737 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.1■□□□□ 0.33
LINC01088-201ENST00000437737 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.1■□□□□ 0.33
LINC01088-201ENST00000437737 GUCY1A2P33402 732 aa17.1■□□□□ 0.33
LINC01088-201ENST00000437737 RNF180Q86T96 592 aa17.1■□□□□ 0.33
LINC01088-201ENST00000437737 MAML3Q96JK9 1138 aa17.1■□□□□ 0.33
LINC01088-201ENST00000437737 TMEM39AQ9NV64 488 aa17.1■□□□□ 0.33
LINC01088-201ENST00000437737 PLXNA1Q9UIW2 1896 aa17.1■□□□□ 0.33
LINC01088-201ENST00000437737 MYH8P13535 1937 aa17.09■□□□□ 0.33
LINC01088-201ENST00000437737 KIAA0355O15063 1070 aa17.09■□□□□ 0.33
LINC01088-201ENST00000437737 POLR3DP05423 398 aaPredicted RBP17.09■□□□□ 0.33
LINC01088-201ENST00000437737 PLCD1P51178 756 aa17.09■□□□□ 0.33
LINC01088-201ENST00000437737 RARSP54136 660 aaKnown RBP17.09■□□□□ 0.33
LINC01088-201ENST00000437737 SAMD1Q6SPF0 538 aaPredicted RBP17.09■□□□□ 0.33
LINC01088-201ENST00000437737 ABRAQ8N0Z2 381 aa17.09■□□□□ 0.33
LINC01088-201ENST00000437737 MB21D1Q8N884 522 aa17.09■□□□□ 0.33
LINC01088-201ENST00000437737 PPM1EQ8WY54 764 aa17.09■□□□□ 0.33
LINC01088-201ENST00000437737 ZNF576Q9H609 170 aa17.09■□□□□ 0.33
LINC01088-201ENST00000437737 COL11A1P12107 1806 aaPredicted RBP17.08■□□□□ 0.33
LINC01088-201ENST00000437737 A0A1W2PQ45 241 aaPredicted RBP17.08■□□□□ 0.32
LINC01088-201ENST00000437737 A0A1W2PQY0 241 aa17.08■□□□□ 0.32
LINC01088-201ENST00000437737 A0A1W2PRG0 241 aa17.08■□□□□ 0.32
LINC01088-201ENST00000437737 FLOT1O75955 427 aa17.08■□□□□ 0.32
LINC01088-201ENST00000437737 PGK1P00558 417 aa17.08■□□□□ 0.32
LINC01088-201ENST00000437737 FCER1AP12319 257 aa17.08■□□□□ 0.32
LINC01088-201ENST00000437737 DSG3P32926 999 aa17.08■□□□□ 0.32
LINC01088-201ENST00000437737 TIFAQ96CG3 184 aa17.08■□□□□ 0.32
LINC01088-201ENST00000437737 GAS2L1Q99501 681 aaPredicted RBP17.08■□□□□ 0.32
LINC01088-201ENST00000437737 PARP14Q460N5 1801 aa17.07■□□□□ 0.32
LINC01088-201ENST00000437737 SURF6O75683 361 aaKnown RBP17.07■□□□□ 0.32
LINC01088-201ENST00000437737 MAP3K12Q12852 859 aa17.07■□□□□ 0.32
LINC01088-201ENST00000437737 ATG4CQ96DT6 458 aa17.07■□□□□ 0.32
LINC01088-201ENST00000437737 RAPGEFL1Q9UHV5 662 aa17.07■□□□□ 0.32
LINC01088-201ENST00000437737 NRBP1Q9UHY1 535 aa17.07■□□□□ 0.32
LINC01088-201ENST00000437737 DBNLQ9UJU6 430 aaKnown RBP17.07■□□□□ 0.32
LINC01088-201ENST00000437737 IPO8O15397 1037 aaKnown RBP17.06■□□□□ 0.32
LINC01088-201ENST00000437737 SLC44A5Q8NCS7 719 aa17.06■□□□□ 0.32
LINC01088-201ENST00000437737 MMP19Q99542 508 aa17.06■□□□□ 0.32
LINC01088-201ENST00000437737 CCDC8Q9H0W5 538 aaPredicted RBP17.06■□□□□ 0.32
LINC01088-201ENST00000437737 TLR7Q9NYK1 1049 aaKnown RBP17.06■□□□□ 0.32
LINC01088-201ENST00000437737 DCDC2CA8MYV0 355 aa17.05■□□□□ 0.32
LINC01088-201ENST00000437737 TRIM27P14373 513 aa17.05■□□□□ 0.32
LINC01088-201ENST00000437737 POLA2Q14181 598 aa17.05■□□□□ 0.32
LINC01088-201ENST00000437737 CCDC129Q6ZRS4 1044 aa17.05■□□□□ 0.32
LINC01088-201ENST00000437737 SPICE1Q8N0Z3 855 aa17.05■□□□□ 0.32
LINC01088-201ENST00000437737 ATXN2LQ8WWM7 1075 aaKnown RBP17.05■□□□□ 0.32
LINC01088-201ENST00000437737 FRAT1Q92837 279 aaPredicted RBP17.05■□□□□ 0.32
LINC01088-201ENST00000437737 CLUAP1Q96AJ1 413 aa17.05■□□□□ 0.32
LINC01088-201ENST00000437737 STARD7Q9NQZ5 370 aa17.05■□□□□ 0.32
LINC01088-201ENST00000437737 MCM9Q9NXL9 1143 aa17.05■□□□□ 0.32
LINC01088-201ENST00000437737 THEGQ9P2T0 379 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms