RNA–Protein interactions for RNA: ENST00000436040.6

APTX-208, Transcript of aprataxin, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene APTX, Length 2,168 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-208ENST00000436040 FOXN1O15353 648 aa13.62□□□□□ -0.23
APTX-208ENST00000436040 MBD3O95983 291 aa13.62□□□□□ -0.23
APTX-208ENST00000436040 UQCRHP07919 91 aa13.62□□□□□ -0.23
APTX-208ENST00000436040 SH3D19Q5HYK7 790 aa13.62□□□□□ -0.23
APTX-208ENST00000436040 SASS6Q6UVJ0 657 aa13.62□□□□□ -0.23
APTX-208ENST00000436040 FASTKD5Q7L8L6 764 aaKnown RBP13.62□□□□□ -0.23
APTX-208ENST00000436040 MAP4K1Q92918 833 aa13.62□□□□□ -0.23
APTX-208ENST00000436040 CFHR5Q9BXR6 569 aa13.62□□□□□ -0.23
APTX-208ENST00000436040 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.62□□□□□ -0.23
APTX-208ENST00000436040 RBM8AQ9Y5S9 174 aaKnown RBP13.62□□□□□ -0.23
APTX-208ENST00000436040 SEPT2Q15019 361 aa13.62□□□□□ -0.23
APTX-208ENST00000436040 LRSAM1Q6UWE0 723 aa13.62□□□□□ -0.23
APTX-208ENST00000436040 ANKRD23Q86SG2 305 aa13.62□□□□□ -0.23
APTX-208ENST00000436040 SMAP1Q8IYB5 467 aaPredicted RBP13.62□□□□□ -0.23
APTX-208ENST00000436040 RBSNQ9H1K0 784 aa13.62□□□□□ -0.23
APTX-208ENST00000436040 CTNNA3Q9UI47 895 aa13.62□□□□□ -0.23
APTX-208ENST00000436040 C19orf81C9J6K1 198 aa13.61□□□□□ -0.23
APTX-208ENST00000436040 BTBD19C9JJ37 291 aa13.61□□□□□ -0.23
APTX-208ENST00000436040 TRPA1O75762 1119 aa13.61□□□□□ -0.23
APTX-208ENST00000436040 CYP21A2P08686 494 aa13.61□□□□□ -0.23
APTX-208ENST00000436040 FGRP09769 529 aa13.61□□□□□ -0.23
APTX-208ENST00000436040 CTCFP49711 727 aaPredicted RBP13.61□□□□□ -0.23
APTX-208ENST00000436040 BACE1P56817 501 aa13.61□□□□□ -0.23
APTX-208ENST00000436040 TBC1D10CQ8IV04 446 aa13.61□□□□□ -0.23
APTX-208ENST00000436040 ZNF444Q8N0Y2 327 aaPredicted RBP13.61□□□□□ -0.23
APTX-208ENST00000436040 PROCA1Q8NCQ7 364 aaPredicted RBP13.61□□□□□ -0.23
APTX-208ENST00000436040 PLIN4Q96Q06 1357 aa13.61□□□□□ -0.23
APTX-208ENST00000436040 USP17L10C9JJH3 530 aa13.61□□□□□ -0.23
APTX-208ENST00000436040 ORC4O43929 436 aa13.61□□□□□ -0.23
APTX-208ENST00000436040 PCP11498 1178 aaKnown RBP13.61□□□□□ -0.23
APTX-208ENST00000436040 RBM10P98175 930 aaKnown RBP13.61□□□□□ -0.23
APTX-208ENST00000436040 MTMR2Q13614 643 aa13.61□□□□□ -0.23
APTX-208ENST00000436040 MYH4Q9Y623 1939 aa13.6□□□□□ -0.23
APTX-208ENST00000436040 ZNF213O14771 459 aa13.6□□□□□ -0.23
APTX-208ENST00000436040 HSPA8P11142 646 aaKnown RBP13.6□□□□□ -0.23
APTX-208ENST00000436040 HMGCS2P54868 508 aa13.6□□□□□ -0.23
APTX-208ENST00000436040 GPAT2Q6NUI2 795 aa13.6□□□□□ -0.23
APTX-208ENST00000436040 GADL1Q6ZQY3 521 aa13.6□□□□□ -0.23
APTX-208ENST00000436040 RASEFQ8IZ41 740 aa13.6□□□□□ -0.23
APTX-208ENST00000436040 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.6□□□□□ -0.23
APTX-208ENST00000436040 USP26Q9BXU7 913 aa13.6□□□□□ -0.23
APTX-208ENST00000436040 KIAA1683Q9H0B3 1180 aa13.6□□□□□ -0.23
APTX-208ENST00000436040 KANSL2Q9H9L4 492 aa13.6□□□□□ -0.23
APTX-208ENST00000436040 SLC45A1Q9Y2W3 748 aa13.6□□□□□ -0.23
APTX-208ENST00000436040 ICA1Q05084 483 aa13.59□□□□□ -0.23
APTX-208ENST00000436040 NECTIN1Q15223 517 aa13.59□□□□□ -0.23
APTX-208ENST00000436040 IMMTQ16891 758 aaKnown RBP13.59□□□□□ -0.23
APTX-208ENST00000436040 AKNAD1Q5T1N1 836 aa13.59□□□□□ -0.23
APTX-208ENST00000436040 USP17L2Q6R6M4 530 aa13.59□□□□□ -0.23
APTX-208ENST00000436040 STOX1Q6ZVD7 989 aa13.59□□□□□ -0.23
APTX-208ENST00000436040 STAG1Q8WVM7 1258 aa13.59□□□□□ -0.23
APTX-208ENST00000436040 AGTPBP1Q9UPW5 1226 aa13.59□□□□□ -0.23
APTX-208ENST00000436040 U3KPZ7 1027 aaPredicted RBP13.59□□□□□ -0.23
APTX-208ENST00000436040 IGKV6D-41A0A0C4DH26 115 aa13.59□□□□□ -0.23
APTX-208ENST00000436040 PDHXO00330 501 aa13.59□□□□□ -0.23
APTX-208ENST00000436040 PRPF40AO75400 957 aaKnown RBP13.59□□□□□ -0.23
APTX-208ENST00000436040 USP14P54578 494 aa13.59□□□□□ -0.23
APTX-208ENST00000436040 CLEC10AQ8IUN9 316 aa13.59□□□□□ -0.23
APTX-208ENST00000436040 NEDD1Q8NHV4 660 aa13.59□□□□□ -0.23
APTX-208ENST00000436040 ACER1Q8TDN7 264 aa13.59□□□□□ -0.23
APTX-208ENST00000436040 SYAP1Q96A49 352 aaPredicted RBP13.59□□□□□ -0.23
APTX-208ENST00000436040 C12orf42Q96LP6 360 aa13.59□□□□□ -0.23
APTX-208ENST00000436040 FEZ1Q99689 392 aa13.59□□□□□ -0.23
APTX-208ENST00000436040 RNF41Q9H4P4 317 aaPredicted RBP13.59□□□□□ -0.23
APTX-208ENST00000436040 ARHGEF10LQ9HCE6 1279 aa13.59□□□□□ -0.23
APTX-208ENST00000436040 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.59□□□□□ -0.23
APTX-208ENST00000436040 TMOD4Q9NZQ9 345 aa13.59□□□□□ -0.23
APTX-208ENST00000436040 REC8O95072 547 aa13.58□□□□□ -0.24
APTX-208ENST00000436040 TSPY3P0CV98 308 aa13.58□□□□□ -0.24
APTX-208ENST00000436040 TSPY8P0CW00 308 aa13.58□□□□□ -0.24
APTX-208ENST00000436040 NT5C2P49902 561 aa13.58□□□□□ -0.24
APTX-208ENST00000436040 TAF1CQ15572 869 aaPredicted RBP13.58□□□□□ -0.24
APTX-208ENST00000436040 NOM1Q5C9Z4 860 aaKnown RBP13.58□□□□□ -0.24
APTX-208ENST00000436040 SIAH1Q8IUQ4 282 aa13.58□□□□□ -0.24
APTX-208ENST00000436040 TSKSQ9UJT2 592 aa13.58□□□□□ -0.24
APTX-208ENST00000436040 NEDD4P46934 1319 aa13.58□□□□□ -0.24
APTX-208ENST00000436040 A0A1W2PRG0 241 aa13.58□□□□□ -0.24
APTX-208ENST00000436040 SLC27A2O14975 620 aa13.58□□□□□ -0.24
APTX-208ENST00000436040 TBC1D8O95759 1140 aa13.58□□□□□ -0.24
APTX-208ENST00000436040 MCM2P49736 904 aa13.58□□□□□ -0.24
APTX-208ENST00000436040 TFAP4Q01664 338 aa13.58□□□□□ -0.24
APTX-208ENST00000436040 CRHR2Q13324 411 aa13.58□□□□□ -0.24
APTX-208ENST00000436040 FAM47AQ5JRC9 791 aa13.58□□□□□ -0.24
APTX-208ENST00000436040 RRP12Q5JTH9 1297 aaKnown RBP13.58□□□□□ -0.24
APTX-208ENST00000436040 CREB3L3Q68CJ9 461 aa13.58□□□□□ -0.24
APTX-208ENST00000436040 MFSD6Q6ZSS7 791 aa13.58□□□□□ -0.24
APTX-208ENST00000436040 SH2D4AQ9H788 454 aa13.58□□□□□ -0.24
APTX-208ENST00000436040 ZFYVE28Q9HCC9 887 aa13.58□□□□□ -0.24
APTX-208ENST00000436040 EMILIN3Q9NT22 766 aa13.58□□□□□ -0.24
APTX-208ENST00000436040 EEF2P13639 858 aaKnown RBP13.57□□□□□ -0.24
APTX-208ENST00000436040 PABPC4Q13310 644 aaKnown RBP eCLIP13.57□□□□□ -0.24
APTX-208ENST00000436040 ADCK5Q3MIX3 580 aa13.57□□□□□ -0.24
APTX-208ENST00000436040 TREML2Q5T2D2 321 aa13.57□□□□□ -0.24
APTX-208ENST00000436040 NYAP2Q9P242 653 aa13.57□□□□□ -0.24
APTX-208ENST00000436040 TMX2Q9Y320 296 aa13.57□□□□□ -0.24
APTX-208ENST00000436040 TSPY2A6NKD2 308 aa13.56□□□□□ -0.24
APTX-208ENST00000436040 NMT2O60551 498 aa13.56□□□□□ -0.24
APTX-208ENST00000436040 LBX1P52954 281 aa13.56□□□□□ -0.24
APTX-208ENST00000436040 DGKZQ13574 1117 aa13.56□□□□□ -0.24
APTX-208ENST00000436040 PPP4R3BQ5MIZ7 849 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms