RNA–Protein interactions for RNA: ENST00000435022.5

HMG20B-205, Transcript of high mobility group 20B, humanhuman

TSL 5

Gene HMG20B, Length 616 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-205ENST00000435022 SWAP70Q9UH65 585 aa26.93■■□□□ 1.9
HMG20B-205ENST00000435022 ZNF236Q9UL36 1845 aa26.93■■□□□ 1.9
HMG20B-205ENST00000435022 PFASO15067 1338 aa26.92■■□□□ 1.9
HMG20B-205ENST00000435022 PTPREP23469 700 aa26.92■■□□□ 1.9
HMG20B-205ENST00000435022 LHX8Q68G74 356 aa26.92■■□□□ 1.9
HMG20B-205ENST00000435022 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.92■■□□□ 1.95e-11■■□□□ 13.9
HMG20B-205ENST00000435022 SZT2Q5T011 3432 aa26.92■■□□□ 1.9
HMG20B-205ENST00000435022 GREB1LQ9C091 1923 aaPredicted RBP26.92■■□□□ 1.9
HMG20B-205ENST00000435022 USP17L12C9JPN9 530 aa26.91■■□□□ 1.9
HMG20B-205ENST00000435022 USP17L21D6R901 530 aa26.91■■□□□ 1.9
HMG20B-205ENST00000435022 IGHA2P01877 340 aa26.91■■□□□ 1.9
HMG20B-205ENST00000435022 CDK8P49336 464 aa26.91■■□□□ 1.9
HMG20B-205ENST00000435022 GRB14Q14449 540 aa26.91■■□□□ 1.9
HMG20B-205ENST00000435022 TSHZ3Q63HK5 1081 aa26.91■■□□□ 1.9
HMG20B-205ENST00000435022 CCAR1Q8IX12 1150 aaKnown RBP26.91■■□□□ 1.9
HMG20B-205ENST00000435022 TRMT44Q8IYL2 757 aaKnown RBP26.91■■□□□ 1.9
HMG20B-205ENST00000435022 NPLOC4Q8TAT6 608 aa26.91■■□□□ 1.9
HMG20B-205ENST00000435022 SLC15A5A6NIM6 579 aa26.9■■□□□ 1.9
HMG20B-205ENST00000435022 CCNA1P78396 465 aa26.9■■□□□ 1.9
HMG20B-205ENST00000435022 C16orf86Q6ZW13 317 aa26.9■■□□□ 1.9
HMG20B-205ENST00000435022 NBPF3Q9H094 633 aa26.9■■□□□ 1.9
HMG20B-205ENST00000435022 WDR78Q5VTH9 848 aa26.89■■□□□ 1.9
HMG20B-205ENST00000435022 CTR9Q6PD62 1173 aa26.89■■□□□ 1.9
HMG20B-205ENST00000435022 MOV10L1Q9BXT6 1211 aaKnown RBP26.89■■□□□ 1.9
HMG20B-205ENST00000435022 C11orf49Q9H6J7 331 aa26.89■■□□□ 1.9
HMG20B-205ENST00000435022 DCTPP1Q9H773 170 aa26.89■■□□□ 1.9
HMG20B-205ENST00000435022 TMX2Q9Y320 296 aa26.89■■□□□ 1.9
HMG20B-205ENST00000435022 SLC4A4Q9Y6R1 1079 aa26.89■■□□□ 1.9
HMG20B-205ENST00000435022 HOXC6P09630 235 aa26.88■■□□□ 1.89
HMG20B-205ENST00000435022 COL6A1P12109 1028 aa26.88■■□□□ 1.89
HMG20B-205ENST00000435022 ICA1Q05084 483 aa26.88■■□□□ 1.89
HMG20B-205ENST00000435022 COG2Q14746 738 aa26.88■■□□□ 1.89
HMG20B-205ENST00000435022 C7orf61Q8IZ16 206 aa26.88■■□□□ 1.89
HMG20B-205ENST00000435022 SPICE1Q8N0Z3 855 aa26.88■■□□□ 1.89
HMG20B-205ENST00000435022 TANGO6Q9C0B7 1094 aa26.88■■□□□ 1.89
HMG20B-205ENST00000435022 ECHDC1Q9NTX5 307 aa26.88■■□□□ 1.89
HMG20B-205ENST00000435022 COL11A1P12107 1806 aaPredicted RBP26.86■■□□□ 1.89
HMG20B-205ENST00000435022 TRPV1Q8NER1 839 aa26.86■■□□□ 1.89
HMG20B-205ENST00000435022 ATG4CQ96DT6 458 aa26.86■■□□□ 1.89
HMG20B-205ENST00000435022 STRBPQ96SI9 672 aaKnown RBP26.86■■□□□ 1.89
HMG20B-205ENST00000435022 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.86■■□□□ 1.89
HMG20B-205ENST00000435022 VCPKMTQ9H867 229 aa26.86■■□□□ 1.89
HMG20B-205ENST00000435022 CWC22Q9HCG8 908 aaKnown RBP26.86■■□□□ 1.89
HMG20B-205ENST00000435022 STAP2Q9UGK3 403 aa26.86■■□□□ 1.89
HMG20B-205ENST00000435022 ZMYND8Q9ULU4 1186 aaPredicted RBP26.86■■□□□ 1.89
HMG20B-205ENST00000435022 DSG3P32926 999 aa26.85■■□□□ 1.89
HMG20B-205ENST00000435022 OSBP2Q969R2 916 aa26.85■■□□□ 1.89
HMG20B-205ENST00000435022 CCDC17Q96LX7 622 aa26.85■■□□□ 1.89
HMG20B-205ENST00000435022 SPATC1LQ9H0A9 340 aa26.85■■□□□ 1.89
HMG20B-205ENST00000435022 GLRX3O76003 335 aaKnown RBP26.84■■□□□ 1.89
HMG20B-205ENST00000435022 KBTBD3Q8NAB2 608 aa26.84■■□□□ 1.89
HMG20B-205ENST00000435022 LPAR1Q92633 364 aa26.84■■□□□ 1.89
HMG20B-205ENST00000435022 GDF15Q99988 308 aa26.84■■□□□ 1.89
HMG20B-205ENST00000435022 ARHGEF10LQ9HCE6 1279 aa26.84■■□□□ 1.89
HMG20B-205ENST00000435022 GSG1L2A8MUP6 293 aa26.83■■□□□ 1.89
HMG20B-205ENST00000435022 SOX1O00570 391 aaPredicted RBP26.83■■□□□ 1.89
HMG20B-205ENST00000435022 EEF2P13639 858 aaKnown RBP26.83■■□□□ 1.89
HMG20B-205ENST00000435022 ERCC3P19447 782 aa26.83■■□□□ 1.89
HMG20B-205ENST00000435022 CYP2C19P33261 490 aa26.83■■□□□ 1.89
HMG20B-205ENST00000435022 ZSCAN25Q6NSZ9 544 aa26.83■■□□□ 1.89
HMG20B-205ENST00000435022 EPB41L4AQ9HCS5 686 aaPredicted RBP26.83■■□□□ 1.89
HMG20B-205ENST00000435022 HOXC10Q9NYD6 342 aa26.83■■□□□ 1.89
HMG20B-205ENST00000435022 PCDHB15Q9Y5E8 787 aa26.83■■□□□ 1.89
HMG20B-205ENST00000435022 IVNS1ABPQ9Y6Y0 642 aa26.83■■□□□ 1.89
HMG20B-205ENST00000435022 COBLO75128 1261 aa26.82■■□□□ 1.88
HMG20B-205ENST00000435022 ADORA2AP29274 412 aa26.82■■□□□ 1.88
HMG20B-205ENST00000435022 FBXO28Q9NVF7 368 aa26.82■■□□□ 1.88
HMG20B-205ENST00000435022 FLOT1O75955 427 aa26.81■■□□□ 1.88
HMG20B-205ENST00000435022 CYBAP13498 195 aa26.81■■□□□ 1.88
HMG20B-205ENST00000435022 SYN1P17600 705 aa26.81■■□□□ 1.88
HMG20B-205ENST00000435022 MFSD14CQ5VZR4 134 aa26.81■■□□□ 1.88
HMG20B-205ENST00000435022 SHCBP1Q8NEM2 672 aa26.81■■□□□ 1.88
HMG20B-205ENST00000435022 OTUD7AQ8TE49 926 aaPredicted RBP26.81■■□□□ 1.88
HMG20B-205ENST00000435022 ROBO3Q96MS0 1386 aa26.81■■□□□ 1.88
HMG20B-205ENST00000435022 WDR46O15213 610 aaKnown RBP26.8■■□□□ 1.88
HMG20B-205ENST00000435022 LRRC26Q2I0M4 334 aa26.8■■□□□ 1.88
HMG20B-205ENST00000435022 SBK1Q52WX2 424 aa26.8■■□□□ 1.88
HMG20B-205ENST00000435022 APPBP2Q92624 585 aa26.8■■□□□ 1.88
HMG20B-205ENST00000435022 ARPP21Q9UBL0 812 aaPredicted RBP26.8■■□□□ 1.88
HMG20B-205ENST00000435022 M0R2C6 588 aa26.79■■□□□ 1.88
HMG20B-205ENST00000435022 RASA1P20936 1047 aa26.79■■□□□ 1.88
HMG20B-205ENST00000435022 ATP2B2Q01814 1243 aa26.79■■□□□ 1.88
HMG20B-205ENST00000435022 TMEM132BQ14DG7 1078 aa26.79■■□□□ 1.88
HMG20B-205ENST00000435022 MB21D1Q8N884 522 aa26.79■■□□□ 1.88
HMG20B-205ENST00000435022 SH2D4AQ9H788 454 aa26.79■■□□□ 1.88
HMG20B-205ENST00000435022 DDX20Q9UHI6 824 aaKnown RBP26.79■■□□□ 1.88
HMG20B-205ENST00000435022 ADAMTS5Q9UNA0 930 aa26.79■■□□□ 1.88
HMG20B-205ENST00000435022 LAMA3Q16787 3333 aa26.78■■□□□ 1.88
HMG20B-205ENST00000435022 A0A1W2PPC1 479 aa26.78■■□□□ 1.88
HMG20B-205ENST00000435022 RNF113AO15541 343 aaKnown RBP26.78■■□□□ 1.88
HMG20B-205ENST00000435022 AMOTL1Q8IY63 956 aa26.78■■□□□ 1.88
HMG20B-205ENST00000435022 STK11IPQ8N1F8 1099 aa26.78■■□□□ 1.88
HMG20B-205ENST00000435022 DDRGK1Q96HY6 314 aa26.78■■□□□ 1.88
HMG20B-205ENST00000435022 KANSL2Q9H9L4 492 aa26.78■■□□□ 1.88
HMG20B-205ENST00000435022 PLS1Q14651 629 aa26.77■■□□□ 1.88
HMG20B-205ENST00000435022 OLFML2BQ68BL8 750 aa26.77■■□□□ 1.88
HMG20B-205ENST00000435022 SAMD1Q6SPF0 538 aaPredicted RBP26.77■■□□□ 1.88
HMG20B-205ENST00000435022 REPS2Q8NFH8 660 aa26.77■■□□□ 1.88
HMG20B-205ENST00000435022 PI4K2BQ8TCG2 481 aa26.77■■□□□ 1.88
HMG20B-205ENST00000435022 GPAA1O43292 621 aa26.76■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms