RNA–Protein interactions for RNA: ENST00000434735.6

UBE3B-203, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-203ENST00000434735 ZSCAN16Q9H4T2 348 aaPredicted RBP13.58□□□□□ -0.24
UBE3B-203ENST00000434735 USP17L5A8MUK1 530 aa13.58□□□□□ -0.24
UBE3B-203ENST00000434735 SH3BP5O60239 455 aa13.58□□□□□ -0.24
UBE3B-203ENST00000434735 LIG4P49917 911 aa13.58□□□□□ -0.24
UBE3B-203ENST00000434735 BMP2KLQ5H9B9 411 aa13.58□□□□□ -0.24
UBE3B-203ENST00000434735 FAM227BQ96M60 508 aa13.58□□□□□ -0.24
UBE3B-203ENST00000434735 ATP8A2Q9NTI2 1148 aa13.58□□□□□ -0.24
UBE3B-203ENST00000434735 HOXC10Q9NYD6 342 aa13.58□□□□□ -0.24
UBE3B-203ENST00000434735 ANKFY1Q9P2R3 1169 aa13.58□□□□□ -0.24
UBE3B-203ENST00000434735 FAM196BA6NMK8 535 aa13.58□□□□□ -0.24
UBE3B-203ENST00000434735 GMPSP49915 693 aaPredicted RBP13.58□□□□□ -0.24
UBE3B-203ENST00000434735 SREK1Q8WXA9 508 aaKnown RBP13.58□□□□□ -0.24
UBE3B-203ENST00000434735 TEKT3Q9BXF9 490 aa13.58□□□□□ -0.24
UBE3B-203ENST00000434735 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.58□□□□□ -0.24
UBE3B-203ENST00000434735 RTL1A6NKG5 1358 aa13.58□□□□□ -0.24
UBE3B-203ENST00000434735 NUCB1Q02818 461 aa13.58□□□□□ -0.24
UBE3B-203ENST00000434735 DPYSL4O14531 572 aa13.57□□□□□ -0.24
UBE3B-203ENST00000434735 GCNT3O95395 438 aa13.57□□□□□ -0.24
UBE3B-203ENST00000434735 OATP04181 439 aa13.57□□□□□ -0.24
UBE3B-203ENST00000434735 TFDP1Q14186 410 aa13.57□□□□□ -0.24
UBE3B-203ENST00000434735 HINFPQ9BQA5 517 aa13.57□□□□□ -0.24
UBE3B-203ENST00000434735 PLVAPQ9BX97 442 aa13.57□□□□□ -0.24
UBE3B-203ENST00000434735 TCOF1Q13428 1488 aaKnown RBP13.57□□□□□ -0.24
UBE3B-203ENST00000434735 TTLL1O95922 423 aa13.57□□□□□ -0.24
UBE3B-203ENST00000434735 P4HA1P13674 534 aa13.57□□□□□ -0.24
UBE3B-203ENST00000434735 CCND2P30279 289 aa13.57□□□□□ -0.24
UBE3B-203ENST00000434735 TMCO3Q6UWJ1 677 aa13.57□□□□□ -0.24
UBE3B-203ENST00000434735 IFNL3Q8IZI9 196 aa13.57□□□□□ -0.24
UBE3B-203ENST00000434735 CMTR1Q8N1G2 835 aaKnown RBP13.57□□□□□ -0.24
UBE3B-203ENST00000434735 RDH13Q8NBN7 331 aa13.57□□□□□ -0.24
UBE3B-203ENST00000434735 TTC12Q9H892 705 aaPredicted RBP13.57□□□□□ -0.24
UBE3B-203ENST00000434735 ST7Q9NRC1 585 aa13.57□□□□□ -0.24
UBE3B-203ENST00000434735 KDRP35968 1356 aa13.57□□□□□ -0.24
UBE3B-203ENST00000434735 SHTN1A0MZ66 631 aa13.57□□□□□ -0.24
UBE3B-203ENST00000434735 CTAGE5O15320 804 aa13.57□□□□□ -0.24
UBE3B-203ENST00000434735 SNX16P57768 344 aa13.57□□□□□ -0.24
UBE3B-203ENST00000434735 BSDC1Q9NW68 430 aaPredicted RBP13.57□□□□□ -0.24
UBE3B-203ENST00000434735 CCL15-CCL14A0A0B4J2E2 113 aa13.57□□□□□ -0.24
UBE3B-203ENST00000434735 PNMA6EA0A0J9YXQ4 647 aa13.57□□□□□ -0.24
UBE3B-203ENST00000434735 DENND3A2RUS2 1198 aa13.57□□□□□ -0.24
UBE3B-203ENST00000434735 CCL15Q16663 113 aa13.57□□□□□ -0.24
UBE3B-203ENST00000434735 MARCH10Q8NA82 808 aaPredicted RBP13.57□□□□□ -0.24
UBE3B-203ENST00000434735 RAB3IL1Q8TBN0 382 aa13.57□□□□□ -0.24
UBE3B-203ENST00000434735 KCNG4Q8TDN1 519 aa13.57□□□□□ -0.24
UBE3B-203ENST00000434735 AMNQ9BXJ7 453 aa13.57□□□□□ -0.24
UBE3B-203ENST00000434735 RNF123Q5XPI4 1314 aa13.56□□□□□ -0.24
UBE3B-203ENST00000434735 DYMQ7RTS9 669 aa13.56□□□□□ -0.24
UBE3B-203ENST00000434735 GSTA5Q7RTV2 222 aa13.56□□□□□ -0.24
UBE3B-203ENST00000434735 PPP1R14CQ8TAE6 165 aa13.56□□□□□ -0.24
UBE3B-203ENST00000434735 GSDMBQ8TAX9 411 aa13.56□□□□□ -0.24
UBE3B-203ENST00000434735 EXOC3O60645 756 aa13.56□□□□□ -0.24
UBE3B-203ENST00000434735 GAS8O95995 478 aa13.56□□□□□ -0.24
UBE3B-203ENST00000434735 SCARF1Q14162 830 aa13.56□□□□□ -0.24
UBE3B-203ENST00000434735 MMP19Q99542 508 aa13.56□□□□□ -0.24
UBE3B-203ENST00000434735 DDX23Q9BUQ8 820 aaKnown RBP13.56□□□□□ -0.24
UBE3B-203ENST00000434735 MRPL44Q9H9J2 332 aaKnown RBP13.56□□□□□ -0.24
UBE3B-203ENST00000434735 SPDYE16A6NNV3 312 aaPredicted RBP13.56□□□□□ -0.24
UBE3B-203ENST00000434735 SPDYE2Q495Y8 402 aa13.56□□□□□ -0.24
UBE3B-203ENST00000434735 HERC4Q5GLZ8 1057 aaPredicted RBP13.56□□□□□ -0.24
UBE3B-203ENST00000434735 CAPN9O14815 690 aa13.56□□□□□ -0.24
UBE3B-203ENST00000434735 XRCC6P12956 609 aaKnown RBP eCLIP13.56□□□□□ -0.24
UBE3B-203ENST00000434735 CASQ1P31415 396 aa13.56□□□□□ -0.24
UBE3B-203ENST00000434735 SNAP25P60880 206 aa13.56□□□□□ -0.24
UBE3B-203ENST00000434735 CBX1P83916 185 aa13.56□□□□□ -0.24
UBE3B-203ENST00000434735 HLTFQ14527 1009 aaKnown RBP eCLIP13.56□□□□□ -0.24
UBE3B-203ENST00000434735 DDX12PQ92771 950 aa13.56□□□□□ -0.24
UBE3B-203ENST00000434735 PHKBQ93100 1093 aa13.56□□□□□ -0.24
UBE3B-203ENST00000434735 ZSCAN10Q96SZ4 725 aaPredicted RBP13.56□□□□□ -0.24
UBE3B-203ENST00000434735 FHDC1Q9C0D6 1143 aaPredicted RBP13.56□□□□□ -0.24
UBE3B-203ENST00000434735 STX17P56962 302 aa13.55□□□□□ -0.24
UBE3B-203ENST00000434735 GPSM2P81274 684 aa13.55□□□□□ -0.24
UBE3B-203ENST00000434735 SNAPC2Q13487 334 aa13.55□□□□□ -0.24
UBE3B-203ENST00000434735 C4orf50Q6ZRC1 276 aa13.55□□□□□ -0.24
UBE3B-203ENST00000434735 NOP9Q86U38 636 aaKnown RBP13.55□□□□□ -0.24
UBE3B-203ENST00000434735 PARK7Q99497 189 aaKnown RBP13.55□□□□□ -0.24
UBE3B-203ENST00000434735 BCCIPQ9P287 314 aaKnown RBP eCLIP13.55□□□□□ -0.24
UBE3B-203ENST00000434735 RIOK3O14730 519 aaKnown RBP13.55□□□□□ -0.24
UBE3B-203ENST00000434735 EPHX2P34913 555 aa13.55□□□□□ -0.24
UBE3B-203ENST00000434735 METTL23Q86XA0 190 aa13.55□□□□□ -0.24
UBE3B-203ENST00000434735 USP17L10C9JJH3 530 aa13.55□□□□□ -0.24
UBE3B-203ENST00000434735 GNAT1P11488 350 aa13.55□□□□□ -0.24
UBE3B-203ENST00000434735 FCER1AP12319 257 aa13.55□□□□□ -0.24
UBE3B-203ENST00000434735 SPATA31A5Q5VU36 1347 aa13.55□□□□□ -0.24
UBE3B-203ENST00000434735 SPATA31A7Q8IWB4 1347 aa13.55□□□□□ -0.24
UBE3B-203ENST00000434735 EIF2AK2P19525 551 aaKnown RBP13.55□□□□□ -0.24
UBE3B-203ENST00000434735 XPAP23025 273 aaPredicted RBP13.55□□□□□ -0.24
UBE3B-203ENST00000434735 FOXP4Q8IVH2 680 aaPredicted RBP13.55□□□□□ -0.24
UBE3B-203ENST00000434735 CELF1Q92879 486 aaKnown RBP13.55□□□□□ -0.24
UBE3B-203ENST00000434735 TTC37Q6PGP7 1564 aa13.55□□□□□ -0.24
UBE3B-203ENST00000434735 SYCE3A1L190 88 aa13.55□□□□□ -0.24
UBE3B-203ENST00000434735 PLCD1P51178 756 aa13.55□□□□□ -0.24
UBE3B-203ENST00000434735 IFI16Q16666 785 aaKnown RBP13.55□□□□□ -0.24
UBE3B-203ENST00000434735 FNDC3AQ9Y2H6 1198 aaKnown RBP13.55□□□□□ -0.24
UBE3B-203ENST00000434735 UPP2O95045 317 aa13.54□□□□□ -0.24
UBE3B-203ENST00000434735 CPA1P15085 419 aa13.54□□□□□ -0.24
UBE3B-203ENST00000434735 MIS18BP1Q6P0N0 1132 aa13.54□□□□□ -0.24
UBE3B-203ENST00000434735 SAMD7Q7Z3H4 446 aa13.54□□□□□ -0.24
UBE3B-203ENST00000434735 IQUBQ8NA54 791 aa13.54□□□□□ -0.24
UBE3B-203ENST00000434735 NCOA5Q9HCD5 579 aaKnown RBP13.54□□□□□ -0.24
UBE3B-203ENST00000434735 VPS54Q9P1Q0 977 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms