RNA–Protein interactions for RNA: ENST00000433535.6

RPUSD3-206, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-206ENST00000433535 CACNB2Q08289 660 aaPredicted RBP26.26■■□□□ 1.79
RPUSD3-206ENST00000433535 MAP2K5Q13163 448 aa26.26■■□□□ 1.79
RPUSD3-206ENST00000433535 NECAB2Q7Z6G3 386 aa26.26■■□□□ 1.79
RPUSD3-206ENST00000433535 TRMT44Q8IYL2 757 aaKnown RBP26.26■■□□□ 1.79
RPUSD3-206ENST00000433535 ANKLE1Q8NAG6 615 aa26.26■■□□□ 1.79
RPUSD3-206ENST00000433535 CCND3P30281 292 aaPredicted RBP26.25■■□□□ 1.79
RPUSD3-206ENST00000433535 CDK8P49336 464 aa26.25■■□□□ 1.79
RPUSD3-206ENST00000433535 MNX1P50219 401 aaPredicted RBP26.25■■□□□ 1.79
RPUSD3-206ENST00000433535 ZSCAN25Q6NSZ9 544 aa26.25■■□□□ 1.79
RPUSD3-206ENST00000433535 AMOTL1Q8IY63 956 aa26.25■■□□□ 1.79
RPUSD3-206ENST00000433535 DDRGK1Q96HY6 314 aa26.25■■□□□ 1.79
RPUSD3-206ENST00000433535 SIAH1Q8IUQ4 282 aa26.24■■□□□ 1.79
RPUSD3-206ENST00000433535 SPICE1Q8N0Z3 855 aa26.24■■□□□ 1.79
RPUSD3-206ENST00000433535 DCTPP1Q9H773 170 aa26.24■■□□□ 1.79
RPUSD3-206ENST00000433535 OGDHLQ9ULD0 1010 aa26.24■■□□□ 1.79
RPUSD3-206ENST00000433535 FRMPD3Q5JV73 1810 aa26.23■■□□□ 1.79
RPUSD3-206ENST00000433535 GLRX3O76003 335 aaKnown RBP26.23■■□□□ 1.79
RPUSD3-206ENST00000433535 PTPREP23469 700 aa26.23■■□□□ 1.79
RPUSD3-206ENST00000433535 C16orf86Q6ZW13 317 aa26.23■■□□□ 1.79
RPUSD3-206ENST00000433535 ARHGEF10LQ9HCE6 1279 aa26.23■■□□□ 1.79
RPUSD3-206ENST00000433535 FLRT1Q9NZU1 646 aa26.23■■□□□ 1.79
RPUSD3-206ENST00000433535 IVNS1ABPQ9Y6Y0 642 aa26.23■■□□□ 1.79
RPUSD3-206ENST00000433535 PARP14Q460N5 1801 aa26.23■■□□□ 1.79
RPUSD3-206ENST00000433535 SLC15A5A6NIM6 579 aa26.22■■□□□ 1.79
RPUSD3-206ENST00000433535 COG2Q14746 738 aa26.22■■□□□ 1.79
RPUSD3-206ENST00000433535 CTR9Q6PD62 1173 aa26.22■■□□□ 1.79
RPUSD3-206ENST00000433535 NBPF3Q9H094 633 aa26.22■■□□□ 1.79
RPUSD3-206ENST00000433535 GRB14Q14449 540 aa26.21■■□□□ 1.79
RPUSD3-206ENST00000433535 KBTBD3Q8NAB2 608 aa26.21■■□□□ 1.79
RPUSD3-206ENST00000433535 GPATCH3Q96I76 525 aa26.21■■□□□ 1.79
RPUSD3-206ENST00000433535 CCDC17Q96LX7 622 aa26.21■■□□□ 1.79
RPUSD3-206ENST00000433535 MOV10L1Q9BXT6 1211 aaKnown RBP26.21■■□□□ 1.79
RPUSD3-206ENST00000433535 PRO3102Q9H379 93 aa26.21■■□□□ 1.79
RPUSD3-206ENST00000433535 C11orf49Q9H6J7 331 aa26.21■■□□□ 1.79
RPUSD3-206ENST00000433535 VCPKMTQ9H867 229 aa26.21■■□□□ 1.79
RPUSD3-206ENST00000433535 TMX2Q9Y320 296 aa26.21■■□□□ 1.79
RPUSD3-206ENST00000433535 ZNF236Q9UL36 1845 aa26.21■■□□□ 1.79
RPUSD3-206ENST00000433535 C7orf61Q8IZ16 206 aa26.2■■□□□ 1.78
RPUSD3-206ENST00000433535 NPLOC4Q8TAT6 608 aa26.2■■□□□ 1.78
RPUSD3-206ENST00000433535 LPAR1Q92633 364 aa26.2■■□□□ 1.78
RPUSD3-206ENST00000433535 SH2D4AQ9H788 454 aa26.2■■□□□ 1.78
RPUSD3-206ENST00000433535 ARPP21Q9UBL0 812 aaPredicted RBP26.2■■□□□ 1.78
RPUSD3-206ENST00000433535 FLOT1O75955 427 aa26.19■■□□□ 1.78
RPUSD3-206ENST00000433535 ATP2B2Q01814 1243 aa26.19■■□□□ 1.78
RPUSD3-206ENST00000433535 SAMD1Q6SPF0 538 aaPredicted RBP26.19■■□□□ 1.78
RPUSD3-206ENST00000433535 STRBPQ96SI9 672 aaKnown RBP26.19■■□□□ 1.78
RPUSD3-206ENST00000433535 SPATC1LQ9H0A9 340 aa26.19■■□□□ 1.78
RPUSD3-206ENST00000433535 HOXC10Q9NYD6 342 aa26.19■■□□□ 1.78
RPUSD3-206ENST00000433535 GREB1LQ9C091 1923 aaPredicted RBP26.19■■□□□ 1.78
RPUSD3-206ENST00000433535 PFASO15067 1338 aa26.18■■□□□ 1.78
RPUSD3-206ENST00000433535 EEF2P13639 858 aaKnown RBP26.18■■□□□ 1.78
RPUSD3-206ENST00000433535 MFSD14CQ5VZR4 134 aa26.18■■□□□ 1.78
RPUSD3-206ENST00000433535 LHX8Q68G74 356 aa26.18■■□□□ 1.78
RPUSD3-206ENST00000433535 OSBP2Q969R2 916 aa26.18■■□□□ 1.78
RPUSD3-206ENST00000433535 ATG4CQ96DT6 458 aa26.18■■□□□ 1.78
RPUSD3-206ENST00000433535 PCDHB15Q9Y5E8 787 aa26.18■■□□□ 1.78
RPUSD3-206ENST00000433535 HOXC6P09630 235 aa26.17■■□□□ 1.78
RPUSD3-206ENST00000433535 DSG3P32926 999 aa26.17■■□□□ 1.78
RPUSD3-206ENST00000433535 STK11IPQ8N1F8 1099 aa26.17■■□□□ 1.78
RPUSD3-206ENST00000433535 APPBP2Q92624 585 aa26.17■■□□□ 1.78
RPUSD3-206ENST00000433535 COL11A1P12107 1806 aaPredicted RBP26.16■■□□□ 1.78
RPUSD3-206ENST00000433535 GSG1L2A8MUP6 293 aa26.16■■□□□ 1.78
RPUSD3-206ENST00000433535 WDR46O15213 610 aaKnown RBP26.16■■□□□ 1.78
RPUSD3-206ENST00000433535 RNF113AO15541 343 aaKnown RBP26.16■■□□□ 1.78
RPUSD3-206ENST00000433535 ERCC3P19447 782 aa26.16■■□□□ 1.78
RPUSD3-206ENST00000433535 PLS1Q14651 629 aa26.16■■□□□ 1.78
RPUSD3-206ENST00000433535 ZMYND8Q9ULU4 1186 aaPredicted RBP26.16■■□□□ 1.78
RPUSD3-206ENST00000433535 M0R2C6 588 aa26.15■■□□□ 1.78
RPUSD3-206ENST00000433535 ADORA2AP29274 412 aa26.15■■□□□ 1.78
RPUSD3-206ENST00000433535 CYP2C19P33261 490 aa26.15■■□□□ 1.78
RPUSD3-206ENST00000433535 MB21D1Q8N884 522 aa26.15■■□□□ 1.78
RPUSD3-206ENST00000433535 OTUD7AQ8TE49 926 aaPredicted RBP26.15■■□□□ 1.78
RPUSD3-206ENST00000433535 KANSL2Q9H9L4 492 aa26.15■■□□□ 1.78
RPUSD3-206ENST00000433535 GPAA1O43292 621 aa26.14■■□□□ 1.78
RPUSD3-206ENST00000433535 RAD21O60216 631 aa26.14■■□□□ 1.78
RPUSD3-206ENST00000433535 SHCBP1Q8NEM2 672 aa26.14■■□□□ 1.78
RPUSD3-206ENST00000433535 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.14■■□□□ 1.78
RPUSD3-206ENST00000433535 EPB41L4AQ9HCS5 686 aaPredicted RBP26.14■■□□□ 1.78
RPUSD3-206ENST00000433535 FBXO28Q9NVF7 368 aa26.14■■□□□ 1.78
RPUSD3-206ENST00000433535 STAP2Q9UGK3 403 aa26.14■■□□□ 1.78
RPUSD3-206ENST00000433535 ROBO3Q96MS0 1386 aa26.14■■□□□ 1.78
RPUSD3-206ENST00000433535 RANBP2P49792 3224 aaKnown RBP26.14■■□□□ 1.77
RPUSD3-206ENST00000433535 MINDY4BA8MYZ0 360 aa26.13■■□□□ 1.77
RPUSD3-206ENST00000433535 COL6A1P12109 1028 aa26.13■■□□□ 1.77
RPUSD3-206ENST00000433535 RASA1P20936 1047 aa26.13■■□□□ 1.77
RPUSD3-206ENST00000433535 CNGA1P29973 690 aa26.13■■□□□ 1.77
RPUSD3-206ENST00000433535 SBK1Q52WX2 424 aa26.13■■□□□ 1.77
RPUSD3-206ENST00000433535 DPP9Q86TI2 863 aa26.13■■□□□ 1.77
RPUSD3-206ENST00000433535 NCAPG2Q86XI2 1143 aa26.13■■□□□ 1.77
RPUSD3-206ENST00000433535 SYN1P17600 705 aa26.12■■□□□ 1.77
RPUSD3-206ENST00000433535 TRPV1Q8NER1 839 aa26.12■■□□□ 1.77
RPUSD3-206ENST00000433535 PI4K2BQ8TCG2 481 aa26.12■■□□□ 1.77
RPUSD3-206ENST00000433535 GOPCQ9HD26 462 aa26.12■■□□□ 1.77
RPUSD3-206ENST00000433535 DDX20Q9UHI6 824 aaKnown RBP26.12■■□□□ 1.77
RPUSD3-206ENST00000433535 TTC41PQ6P2S7 1318 aa26.12■■□□□ 1.77
RPUSD3-206ENST00000433535 COBLO75128 1261 aa26.11■■□□□ 1.77
RPUSD3-206ENST00000433535 IGHA2P01877 340 aa26.11■■□□□ 1.77
RPUSD3-206ENST00000433535 ZFYP08048 801 aaPredicted RBP26.11■■□□□ 1.77
RPUSD3-206ENST00000433535 RRP1P56182 461 aaKnown RBP26.11■■□□□ 1.77
RPUSD3-206ENST00000433535 TMEM132BQ14DG7 1078 aa26.11■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms