RNA–Protein interactions for RNA: ENST00000433257.5

DDX56-205, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-205ENST00000433257 ZNF532Q9HCE3 1301 aa16.74■□□□□ 0.27
DDX56-205ENST00000433257 SYNRGQ9UMZ2 1314 aa16.74■□□□□ 0.27
DDX56-205ENST00000433257 ANKRD36CQ5JPF3 1778 aa16.74■□□□□ 0.27
DDX56-205ENST00000433257 CASZ1Q86V15 1759 aa16.73■□□□□ 0.27
DDX56-205ENST00000433257 ERVV-1B6SEH8 477 aa16.73■□□□□ 0.27
DDX56-205ENST00000433257 POLR3GO15318 223 aaPredicted RBP16.73■□□□□ 0.27
DDX56-205ENST00000433257 ACTN4O43707 911 aaKnown RBP16.73■□□□□ 0.27
DDX56-205ENST00000433257 BMP6P22004 513 aa16.73■□□□□ 0.27
DDX56-205ENST00000433257 GTF2E1P29083 439 aaPredicted RBP16.73■□□□□ 0.27
DDX56-205ENST00000433257 AKAP17AQ02040 695 aaKnown RBP16.73■□□□□ 0.27
DDX56-205ENST00000433257 SCARF1Q14162 830 aa16.73■□□□□ 0.27
DDX56-205ENST00000433257 WTAPQ15007 396 aa16.73■□□□□ 0.27
DDX56-205ENST00000433257 IGSF22Q8N9C0 903 aa16.73■□□□□ 0.27
DDX56-205ENST00000433257 DHX58Q96C10 678 aa16.73■□□□□ 0.27
DDX56-205ENST00000433257 RPGRIP1Q96KN7 1286 aa16.73■□□□□ 0.27
DDX56-205ENST00000433257 AIFM3Q96NN9 605 aa16.73■□□□□ 0.27
DDX56-205ENST00000433257 MFAP3LO75121 409 aa16.72■□□□□ 0.27
DDX56-205ENST00000433257 RPS6KA5O75582 802 aa16.72■□□□□ 0.27
DDX56-205ENST00000433257 CAMTA2O94983 1202 aa16.72■□□□□ 0.27
DDX56-205ENST00000433257 PBX1P40424 430 aa16.72■□□□□ 0.27
DDX56-205ENST00000433257 NOM1Q5C9Z4 860 aaKnown RBP16.72■□□□□ 0.27
DDX56-205ENST00000433257 CDKAL1Q5VV42 579 aa16.72■□□□□ 0.27
DDX56-205ENST00000433257 IFNL3Q8IZI9 196 aa16.72■□□□□ 0.27
DDX56-205ENST00000433257 FAM177A1Q8N128 213 aaPredicted RBP16.72■□□□□ 0.27
DDX56-205ENST00000433257 MED4Q9NPJ6 270 aa16.72■□□□□ 0.27
DDX56-205ENST00000433257 CNNM1Q9NRU3 951 aa16.72■□□□□ 0.27
DDX56-205ENST00000433257 PPP1R1BQ9UD71 204 aaPredicted RBP16.72■□□□□ 0.27
DDX56-205ENST00000433257 LRP5O75197 1615 aa16.72■□□□□ 0.27
DDX56-205ENST00000433257 TCRBV5S4A2TA0A5A2 114 aa16.72■□□□□ 0.27
DDX56-205ENST00000433257 TRIM75PA6NK02 468 aa16.72■□□□□ 0.27
DDX56-205ENST00000433257 SEC31AO94979 1220 aaKnown RBP16.72■□□□□ 0.27
DDX56-205ENST00000433257 PDE8BO95263 885 aa16.72■□□□□ 0.27
DDX56-205ENST00000433257 PCP11498 1178 aaKnown RBP16.72■□□□□ 0.27
DDX56-205ENST00000433257 ADKP55263 362 aaKnown RBP16.72■□□□□ 0.27
DDX56-205ENST00000433257 PUM3Q15397 648 aaKnown RBP16.72■□□□□ 0.27
DDX56-205ENST00000433257 MAP9Q49MG5 647 aa16.72■□□□□ 0.27
DDX56-205ENST00000433257 HSP90B2PQ58FF3 399 aa16.72■□□□□ 0.27
DDX56-205ENST00000433257 RAB11FIP4Q86YS3 637 aa16.72■□□□□ 0.27
DDX56-205ENST00000433257 LPIN2Q92539 896 aa16.72■□□□□ 0.27
DDX56-205ENST00000433257 NAPGQ99747 312 aaPredicted RBP16.72■□□□□ 0.27
DDX56-205ENST00000433257 RMND1Q9NWS8 449 aa16.72■□□□□ 0.27
DDX56-205ENST00000433257 ADD3Q9UEY8 706 aaKnown RBP16.72■□□□□ 0.27
DDX56-205ENST00000433257 MYO5AQ9Y4I1 1855 aaKnown RBP16.71■□□□□ 0.27
DDX56-205ENST00000433257 CTAGE15A4D2H0 777 aa16.71■□□□□ 0.27
DDX56-205ENST00000433257 BTBD18B2RXH4 712 aa16.71■□□□□ 0.27
DDX56-205ENST00000433257 RGL2O15211 777 aa16.71■□□□□ 0.27
DDX56-205ENST00000433257 FANCGO15287 622 aa16.71■□□□□ 0.27
DDX56-205ENST00000433257 IDH1O75874 414 aaKnown RBP16.71■□□□□ 0.27
DDX56-205ENST00000433257 SASH3O75995 380 aa16.71■□□□□ 0.27
DDX56-205ENST00000433257 MMP10P09238 476 aa16.71■□□□□ 0.27
DDX56-205ENST00000433257 CTAGE8P0CG41 777 aa16.71■□□□□ 0.27
DDX56-205ENST00000433257 FMR1Q06787 632 aaKnown RBP eCLIP16.71■□□□□ 0.27
DDX56-205ENST00000433257 ZSCAN26Q16670 478 aa16.71■□□□□ 0.27
DDX56-205ENST00000433257 CYP26C1Q6V0L0 522 aa16.71■□□□□ 0.27
DDX56-205ENST00000433257 GIGYF2Q6Y7W6 1299 aaKnown RBP16.71■□□□□ 0.27
DDX56-205ENST00000433257 BICDL1Q6ZP65 573 aa16.71■□□□□ 0.27
DDX56-205ENST00000433257 SH3RF1Q7Z6J0 888 aa16.71■□□□□ 0.27
DDX56-205ENST00000433257 CTAGE6Q86UF2 777 aa16.71■□□□□ 0.27
DDX56-205ENST00000433257 CTAGE4Q8IX94 777 aa16.71■□□□□ 0.27
DDX56-205ENST00000433257 CRACR2BQ8N4Y2 399 aaPredicted RBP16.71■□□□□ 0.27
DDX56-205ENST00000433257 CTCFLQ8NI51 663 aaPredicted RBP16.71■□□□□ 0.27
DDX56-205ENST00000433257 FAM71BQ8TC56 605 aa16.71■□□□□ 0.27
DDX56-205ENST00000433257 VIPAS39Q9H9C1 493 aa16.71■□□□□ 0.27
DDX56-205ENST00000433257 RBM28Q9NW13 759 aaKnown RBP16.71■□□□□ 0.27
DDX56-205ENST00000433257 MKRN1Q9UHC7 482 aaKnown RBP16.71■□□□□ 0.27
DDX56-205ENST00000433257 CALM1P0DP23 149 aa16.7■□□□□ 0.26
DDX56-205ENST00000433257 CALM2P0DP24 149 aa16.7■□□□□ 0.26
DDX56-205ENST00000433257 CALM3P0DP25 149 aa16.7■□□□□ 0.26
DDX56-205ENST00000433257 SLC5A1P13866 664 aa16.7■□□□□ 0.26
DDX56-205ENST00000433257 ACTN2P35609 894 aa16.7■□□□□ 0.26
DDX56-205ENST00000433257 PTGER2P43116 358 aa16.7■□□□□ 0.26
DDX56-205ENST00000433257 TOB1P50616 345 aaPredicted RBP16.7■□□□□ 0.26
DDX56-205ENST00000433257 CTSWP56202 376 aa16.7■□□□□ 0.26
DDX56-205ENST00000433257 KIF4BQ2VIQ3 1234 aa16.7■□□□□ 0.26
DDX56-205ENST00000433257 CTR9Q6PD62 1173 aa16.7■□□□□ 0.26
DDX56-205ENST00000433257 VGLL2Q8N8G2 317 aa16.7■□□□□ 0.26
DDX56-205ENST00000433257 EHBP1Q8NDI1 1231 aa16.7■□□□□ 0.26
DDX56-205ENST00000433257 SETDB2Q96T68 719 aa16.7■□□□□ 0.26
DDX56-205ENST00000433257 TMEM51Q9NW97 253 aa16.7■□□□□ 0.26
DDX56-205ENST00000433257 ZSWIM5Q9P217 1185 aa16.7■□□□□ 0.26
DDX56-205ENST00000433257 ITGA6P23229 1130 aa16.69■□□□□ 0.26
DDX56-205ENST00000433257 CUL4BQ13620 913 aa16.69■□□□□ 0.26
DDX56-205ENST00000433257 HLFQ16534 295 aa16.69■□□□□ 0.26
DDX56-205ENST00000433257 WDR93Q6P2C0 686 aa16.69■□□□□ 0.26
DDX56-205ENST00000433257 GOLGA6L1Q8N7Z2 621 aa16.69■□□□□ 0.26
DDX56-205ENST00000433257 CCDC148Q8NFR7 591 aa16.69■□□□□ 0.26
DDX56-205ENST00000433257 PIH1D3Q9NQM4 214 aaKnown RBP16.69■□□□□ 0.26
DDX56-205ENST00000433257 LIMA1Q9UHB6 759 aaKnown RBP16.69■□□□□ 0.26
DDX56-205ENST00000433257 ADAM21Q9UKJ8 722 aa16.69■□□□□ 0.26
DDX56-205ENST00000433257 LRRC10BA6NIK2 292 aa16.69■□□□□ 0.26
DDX56-205ENST00000433257 PDE8AO60658 829 aa16.69■□□□□ 0.26
DDX56-205ENST00000433257 TM4SF1P30408 202 aa16.69■□□□□ 0.26
DDX56-205ENST00000433257 KRT2P35908 639 aa16.69■□□□□ 0.26
DDX56-205ENST00000433257 TRAPPC10P48553 1259 aa16.69■□□□□ 0.26
DDX56-205ENST00000433257 NT5C2P49902 561 aa16.69■□□□□ 0.26
DDX56-205ENST00000433257 RAD51AP2Q09MP3 1159 aa16.69■□□□□ 0.26
DDX56-205ENST00000433257 BEND6Q5SZJ8 279 aaPredicted RBP16.69■□□□□ 0.26
DDX56-205ENST00000433257 TBC1D9BQ66K14 1250 aa16.69■□□□□ 0.26
DDX56-205ENST00000433257 TTLL11Q8NHH1 800 aa16.69■□□□□ 0.26
DDX56-205ENST00000433257 SGIP1Q9BQI5 828 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms