RNA–Protein interactions for RNA: ENST00000431678.5

PBRM1-213, Transcript of polybromo 1, humanhuman

TSL 5

Gene PBRM1, Length 809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-213ENST00000431678 MAGEA10P43363 369 aaPredicted RBP28.5■■■□□ 2.15
PBRM1-213ENST00000431678 CCNA1P78396 465 aa28.5■■■□□ 2.15
PBRM1-213ENST00000431678 RPAP2Q8IXW5 612 aaPredicted RBP28.5■■■□□ 2.15
PBRM1-213ENST00000431678 BOLA2Q9H3K6 86 aa28.5■■■□□ 2.15
PBRM1-213ENST00000431678 ZNFX1Q9P2E3 1918 aaKnown RBP28.49■■■□□ 2.15
PBRM1-213ENST00000431678 COL11A1P12107 1806 aaPredicted RBP28.49■■■□□ 2.15
PBRM1-213ENST00000431678 SLC15A5A6NIM6 579 aa28.49■■■□□ 2.15
PBRM1-213ENST00000431678 LRRC26Q2I0M4 334 aa28.49■■■□□ 2.15
PBRM1-213ENST00000431678 GRB14Q14449 540 aa28.48■■■□□ 2.15
PBRM1-213ENST00000431678 SIAH1Q8IUQ4 282 aa28.48■■■□□ 2.15
PBRM1-213ENST00000431678 CYP2D7A0A087X1C5 515 aa28.47■■■□□ 2.15
PBRM1-213ENST00000431678 CYP2C19P33261 490 aa28.47■■■□□ 2.15
PBRM1-213ENST00000431678 ADD2P35612 726 aa28.47■■■□□ 2.15
PBRM1-213ENST00000431678 TRPV1Q8NER1 839 aa28.47■■■□□ 2.15
PBRM1-213ENST00000431678 PAG1Q9NWQ8 432 aa28.47■■■□□ 2.15
PBRM1-213ENST00000431678 ZNF236Q9UL36 1845 aa28.47■■■□□ 2.15
PBRM1-213ENST00000431678 GLRX3O76003 335 aaKnown RBP28.46■■■□□ 2.15
PBRM1-213ENST00000431678 MBD4O95243 580 aa28.46■■■□□ 2.15
PBRM1-213ENST00000431678 AKR1B1P15121 316 aa28.46■■■□□ 2.15
PBRM1-213ENST00000431678 MOV10L1Q9BXT6 1211 aaKnown RBP28.46■■■□□ 2.15
PBRM1-213ENST00000431678 DDX19BQ9UMR2 479 aa28.46■■■□□ 2.15
PBRM1-213ENST00000431678 IGHA2P01877 340 aa28.45■■■□□ 2.14
PBRM1-213ENST00000431678 HOXC6P09630 235 aa28.45■■■□□ 2.14
PBRM1-213ENST00000431678 COG2Q14746 738 aa28.45■■■□□ 2.14
PBRM1-213ENST00000431678 MFSD14CQ5VZR4 134 aa28.45■■■□□ 2.14
PBRM1-213ENST00000431678 TANGO6Q9C0B7 1094 aa28.45■■■□□ 2.14
PBRM1-213ENST00000431678 HMMRO75330 724 aa28.44■■■□□ 2.14
PBRM1-213ENST00000431678 MS4A1P11836 297 aa28.44■■■□□ 2.14
PBRM1-213ENST00000431678 ATP2B2Q01814 1243 aa28.44■■■□□ 2.14
PBRM1-213ENST00000431678 IVNS1ABPQ9Y6Y0 642 aa28.44■■■□□ 2.14
PBRM1-213ENST00000431678 RAB11FIP3O75154 756 aa28.43■■■□□ 2.14
PBRM1-213ENST00000431678 CNGA1P29973 690 aa28.43■■■□□ 2.14
PBRM1-213ENST00000431678 TMEM179Q6ZVK1 233 aa28.43■■■□□ 2.14
PBRM1-213ENST00000431678 SPICE1Q8N0Z3 855 aa28.43■■■□□ 2.14
PBRM1-213ENST00000431678 DDX20Q9UHI6 824 aaKnown RBP28.43■■■□□ 2.14
PBRM1-213ENST00000431678 ATP5JP18859 108 aa28.42■■■□□ 2.14
PBRM1-213ENST00000431678 HAUS7Q99871 368 aa28.42■■■□□ 2.14
PBRM1-213ENST00000431678 SPATC1LQ9H0A9 340 aa28.42■■■□□ 2.14
PBRM1-213ENST00000431678 SWAP70Q9UH65 585 aa28.42■■■□□ 2.14
PBRM1-213ENST00000431678 ERCC3P19447 782 aa28.41■■■□□ 2.14
PBRM1-213ENST00000431678 ADORA2AP29274 412 aa28.41■■■□□ 2.14
PBRM1-213ENST00000431678 C20orf194Q5TEA3 1177 aa28.41■■■□□ 2.14
PBRM1-213ENST00000431678 SENP6Q9GZR1 1112 aaPredicted RBP28.41■■■□□ 2.14
PBRM1-213ENST00000431678 HOXC10Q9NYD6 342 aa28.41■■■□□ 2.14
PBRM1-213ENST00000431678 SMARCA5O60264 1052 aaPredicted RBP28.4■■■□□ 2.14
PBRM1-213ENST00000431678 COBLO75128 1261 aa28.4■■■□□ 2.14
PBRM1-213ENST00000431678 DSG3P32926 999 aa28.4■■■□□ 2.14
PBRM1-213ENST00000431678 MDM2Q00987 491 aaPredicted RBP28.4■■■□□ 2.14
PBRM1-213ENST00000431678 C12orf60Q5U649 245 aa28.4■■■□□ 2.14
PBRM1-213ENST00000431678 ANO1Q5XXA6 986 aa28.4■■■□□ 2.14
PBRM1-213ENST00000431678 ATG4CQ96DT6 458 aa28.4■■■□□ 2.14
PBRM1-213ENST00000431678 UBE2OQ9C0C9 1292 aaKnown RBP28.4■■■□□ 2.14
PBRM1-213ENST00000431678 SMCHD1A6NHR9 2005 aa28.4■■■□□ 2.14
PBRM1-213ENST00000431678 USP17L12C9JPN9 530 aa28.39■■■□□ 2.14
PBRM1-213ENST00000431678 USP17L21D6R901 530 aa28.39■■■□□ 2.14
PBRM1-213ENST00000431678 CYBAP13498 195 aa28.39■■■□□ 2.14
PBRM1-213ENST00000431678 CDK8P49336 464 aa28.39■■■□□ 2.14
PBRM1-213ENST00000431678 SAMD1Q6SPF0 538 aaPredicted RBP28.39■■■□□ 2.14
PBRM1-213ENST00000431678 Q7L0L9 218 aa28.39■■■□□ 2.14
PBRM1-213ENST00000431678 DPP9Q86TI2 863 aa28.39■■■□□ 2.14
PBRM1-213ENST00000431678 TDHQ8IZJ6 230 aa28.39■■■□□ 2.14
PBRM1-213ENST00000431678 LPAR1Q92633 364 aa28.39■■■□□ 2.14
PBRM1-213ENST00000431678 ATP8A2Q9NTI2 1148 aa28.39■■■□□ 2.14
PBRM1-213ENST00000431678 TMX2Q9Y320 296 aa28.39■■■□□ 2.14
PBRM1-213ENST00000431678 PLXNA1Q9UIW2 1896 aa28.38■■■□□ 2.13
PBRM1-213ENST00000431678 ATN1P54259 1190 aaPredicted RBP28.38■■■□□ 2.13
PBRM1-213ENST00000431678 ICA1Q05084 483 aa28.38■■■□□ 2.13
PBRM1-213ENST00000431678 PLS1Q14651 629 aa28.38■■■□□ 2.13
PBRM1-213ENST00000431678 PUS7LQ9H0K6 701 aaKnown RBP28.38■■■□□ 2.13
PBRM1-213ENST00000431678 VCPKMTQ9H867 229 aa28.38■■■□□ 2.13
PBRM1-213ENST00000431678 LTBP2Q14767 1821 aa28.37■■■□□ 2.13
PBRM1-213ENST00000431678 FLOT1O75955 427 aa28.37■■■□□ 2.13
PBRM1-213ENST00000431678 PRAMEF19Q5SWL8 479 aa28.37■■■□□ 2.13
PBRM1-213ENST00000431678 GREB1LQ9C091 1923 aaPredicted RBP28.37■■■□□ 2.13
PBRM1-213ENST00000431678 LRIT3Q3SXY7 679 aa28.36■■■□□ 2.13
PBRM1-213ENST00000431678 GJC2Q5T442 439 aaPredicted RBP28.36■■■□□ 2.13
PBRM1-213ENST00000431678 SHCBP1Q8NEM2 672 aa28.36■■■□□ 2.13
PBRM1-213ENST00000431678 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.36■■■□□ 2.131e-6■■■■■ 40.9
PBRM1-213ENST00000431678 ARHGEF10LQ9HCE6 1279 aa28.36■■■□□ 2.13
PBRM1-213ENST00000431678 SLC4A4Q9Y6R1 1079 aa28.36■■■□□ 2.13
PBRM1-213ENST00000431678 LAMA2P24043 3122 aaKnown RBP28.35■■■□□ 2.13
PBRM1-213ENST00000431678 EEF2P13639 858 aaKnown RBP28.35■■■□□ 2.13
PBRM1-213ENST00000431678 UBE3CQ15386 1083 aa28.35■■■□□ 2.13
PBRM1-213ENST00000431678 OLFML2BQ68BL8 750 aa28.35■■■□□ 2.13
PBRM1-213ENST00000431678 C16orf86Q6ZW13 317 aa28.35■■■□□ 2.13
PBRM1-213ENST00000431678 NCAPG2Q86XI2 1143 aa28.35■■■□□ 2.13
PBRM1-213ENST00000431678 FBXO28Q9NVF7 368 aa28.35■■■□□ 2.13
PBRM1-213ENST00000431678 RCAN3Q9UKA8 241 aa28.35■■■□□ 2.13
PBRM1-213ENST00000431678 STRNO43815 780 aa28.34■■■□□ 2.13
PBRM1-213ENST00000431678 TMEM132BQ14DG7 1078 aa28.34■■■□□ 2.13
PBRM1-213ENST00000431678 CTR9Q6PD62 1173 aa28.34■■■□□ 2.13
PBRM1-213ENST00000431678 DNM1LO00429 736 aa28.33■■■□□ 2.13
PBRM1-213ENST00000431678 MSCO60682 206 aa28.33■■■□□ 2.13
PBRM1-213ENST00000431678 DEFB123Q8N688 67 aa28.33■■■□□ 2.13
PBRM1-213ENST00000431678 CCDC17Q96LX7 622 aa28.33■■■□□ 2.13
PBRM1-213ENST00000431678 WDR46O15213 610 aaKnown RBP28.32■■■□□ 2.12
PBRM1-213ENST00000431678 MB21D1Q8N884 522 aa28.32■■■□□ 2.12
PBRM1-213ENST00000431678 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.32■■■□□ 2.12
PBRM1-213ENST00000431678 LRRCC1Q9C099 1032 aa28.32■■■□□ 2.12
PBRM1-213ENST00000431678 STK11IPQ8N1F8 1099 aa28.31■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms