RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 RABGAP1Q9Y3P9 1069 aa11.69□□□□□ -0.54
HDAC6-207ENST00000430858 PRDM1O75626 825 aa11.68□□□□□ -0.54
HDAC6-207ENST00000430858 MAPK4P31152 587 aa11.68□□□□□ -0.54
HDAC6-207ENST00000430858 ATP2B2Q01814 1243 aa11.68□□□□□ -0.54
HDAC6-207ENST00000430858 COG2Q14746 738 aa11.68□□□□□ -0.54
HDAC6-207ENST00000430858 Q3C1V9 767 aa11.68□□□□□ -0.54
HDAC6-207ENST00000430858 SLAIN1Q8ND83 568 aa11.68□□□□□ -0.54
HDAC6-207ENST00000430858 PXYLP1Q8TE99 480 aa11.68□□□□□ -0.54
HDAC6-207ENST00000430858 SH3TC2Q8TF17 1288 aa11.68□□□□□ -0.54
HDAC6-207ENST00000430858 PAGR1Q9BTK6 254 aa11.68□□□□□ -0.54
HDAC6-207ENST00000430858 TMEM106CQ9BVX2 250 aa11.68□□□□□ -0.54
HDAC6-207ENST00000430858 GOPCQ9HD26 462 aa11.68□□□□□ -0.54
HDAC6-207ENST00000430858 DIAPH3Q9NSV4 1193 aa11.68□□□□□ -0.54
HDAC6-207ENST00000430858 NYAP2Q9P242 653 aa11.68□□□□□ -0.54
HDAC6-207ENST00000430858 ANAPC4Q9UJX5 808 aa11.68□□□□□ -0.54
HDAC6-207ENST00000430858 ZMYM6O95789 1325 aa11.67□□□□□ -0.54
HDAC6-207ENST00000430858 CCDC171Q6TFL3 1326 aa11.67□□□□□ -0.54
HDAC6-207ENST00000430858 IGKV6D-41A0A0C4DH26 115 aa11.67□□□□□ -0.54
HDAC6-207ENST00000430858 SPDYE16A6NNV3 312 aaPredicted RBP11.67□□□□□ -0.54
HDAC6-207ENST00000430858 WDR46O15213 610 aaKnown RBP11.67□□□□□ -0.54
HDAC6-207ENST00000430858 TSPY3P0CV98 308 aa11.67□□□□□ -0.54
HDAC6-207ENST00000430858 TSPY8P0CW00 308 aa11.67□□□□□ -0.54
HDAC6-207ENST00000430858 HSPD1P10809 573 aaKnown RBP11.67□□□□□ -0.54
HDAC6-207ENST00000430858 PDE4AP27815 886 aa11.67□□□□□ -0.54
HDAC6-207ENST00000430858 UBXN2AP68543 259 aa11.67□□□□□ -0.54
HDAC6-207ENST00000430858 CCNA1P78396 465 aa11.67□□□□□ -0.54
HDAC6-207ENST00000430858 KIAA1755Q5JYT7 1200 aa11.67□□□□□ -0.54
HDAC6-207ENST00000430858 POTEEQ6S8J3 1075 aa11.67□□□□□ -0.54
HDAC6-207ENST00000430858 ZNF589Q86UQ0 364 aaPredicted RBP11.67□□□□□ -0.54
HDAC6-207ENST00000430858 CCAR1Q8IX12 1150 aaKnown RBP11.67□□□□□ -0.54
HDAC6-207ENST00000430858 SPICE1Q8N0Z3 855 aa11.67□□□□□ -0.54
HDAC6-207ENST00000430858 TANGO6Q9C0B7 1094 aa11.67□□□□□ -0.54
HDAC6-207ENST00000430858 ZSWIM8A7E2V4 1837 aa11.67□□□□□ -0.54
HDAC6-207ENST00000430858 PLIN4Q96Q06 1357 aa11.67□□□□□ -0.54
HDAC6-207ENST00000430858 ADCY3O60266 1144 aa11.66□□□□□ -0.54
HDAC6-207ENST00000430858 PEX10O60683 326 aa11.66□□□□□ -0.54
HDAC6-207ENST00000430858 CNMDO75829 334 aa11.66□□□□□ -0.54
HDAC6-207ENST00000430858 FLOT1O75955 427 aa11.66□□□□□ -0.54
HDAC6-207ENST00000430858 FGAP02671 866 aa11.66□□□□□ -0.54
HDAC6-207ENST00000430858 DSG3P32926 999 aa11.66□□□□□ -0.54
HDAC6-207ENST00000430858 TFAP4Q01664 338 aa11.66□□□□□ -0.54
HDAC6-207ENST00000430858 PPP4R3BQ5MIZ7 849 aa11.66□□□□□ -0.54
HDAC6-207ENST00000430858 TTC22Q5TAA0 569 aa11.66□□□□□ -0.54
HDAC6-207ENST00000430858 MB21D1Q8N884 522 aa11.66□□□□□ -0.54
HDAC6-207ENST00000430858 NEDD1Q8NHV4 660 aa11.66□□□□□ -0.54
HDAC6-207ENST00000430858 SOCS4Q8WXH5 440 aa11.66□□□□□ -0.54
HDAC6-207ENST00000430858 MTMR4Q9NYA4 1195 aa11.66□□□□□ -0.54
HDAC6-207ENST00000430858 BIN2Q9UBW5 565 aaPredicted RBP11.66□□□□□ -0.54
HDAC6-207ENST00000430858 GJD2Q9UKL4 321 aa11.66□□□□□ -0.54
HDAC6-207ENST00000430858 SYNPO2Q9UMS6 1093 aa11.66□□□□□ -0.54
HDAC6-207ENST00000430858 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.66□□□□□ -0.54
HDAC6-207ENST00000430858 POTEFA5A3E0 1075 aa11.65□□□□□ -0.54
HDAC6-207ENST00000430858 TTLL1O95922 423 aa11.65□□□□□ -0.54
HDAC6-207ENST00000430858 GSPT1P15170 499 aaKnown RBP11.65□□□□□ -0.54
HDAC6-207ENST00000430858 CTDSPL2Q05D32 466 aa11.65□□□□□ -0.54
HDAC6-207ENST00000430858 CWC27Q6UX04 472 aaKnown RBP11.65□□□□□ -0.54
HDAC6-207ENST00000430858 GPR142Q7Z601 462 aa11.65□□□□□ -0.54
HDAC6-207ENST00000430858 MKL1Q969V6 931 aa11.65□□□□□ -0.54
HDAC6-207ENST00000430858 CEP95Q96GE4 821 aa11.65□□□□□ -0.54
HDAC6-207ENST00000430858 NUDT12Q9BQG2 462 aa11.65□□□□□ -0.54
HDAC6-207ENST00000430858 PORCNQ9H237 461 aa11.65□□□□□ -0.54
HDAC6-207ENST00000430858 BTBD7Q9P203 1132 aa11.65□□□□□ -0.54
HDAC6-207ENST00000430858 CLIP2Q9UDT6 1046 aa11.65□□□□□ -0.54
HDAC6-207ENST00000430858 HTTP42858 3142 aa11.64□□□□□ -0.55
HDAC6-207ENST00000430858 MYH8P13535 1937 aa11.64□□□□□ -0.55
HDAC6-207ENST00000430858 TSPY2A6NKD2 308 aa11.64□□□□□ -0.55
HDAC6-207ENST00000430858 F5H6K3 240 aa11.64□□□□□ -0.55
HDAC6-207ENST00000430858 ORC4O43929 436 aa11.64□□□□□ -0.55
HDAC6-207ENST00000430858 RAD21O60216 631 aa11.64□□□□□ -0.55
HDAC6-207ENST00000430858 MYCP01106 439 aaPredicted RBP11.64□□□□□ -0.55
HDAC6-207ENST00000430858 FGRP09769 529 aa11.64□□□□□ -0.55
HDAC6-207ENST00000430858 PCP11498 1178 aaKnown RBP11.64□□□□□ -0.55
HDAC6-207ENST00000430858 XRCC5P13010 732 aaKnown RBP11.64□□□□□ -0.55
HDAC6-207ENST00000430858 KLRC3Q07444 240 aa11.64□□□□□ -0.55
HDAC6-207ENST00000430858 FAM47AQ5JRC9 791 aa11.64□□□□□ -0.55
HDAC6-207ENST00000430858 PLEKHH3Q7Z736 793 aa11.64□□□□□ -0.55
HDAC6-207ENST00000430858 CWC22Q9HCG8 908 aaKnown RBP11.64□□□□□ -0.55
HDAC6-207ENST00000430858 MGAMO43451 1857 aa11.63□□□□□ -0.55
HDAC6-207ENST00000430858 GREB1LQ9C091 1923 aaPredicted RBP11.63□□□□□ -0.55
HDAC6-207ENST00000430858 NDUFB10O96000 172 aa11.63□□□□□ -0.55
HDAC6-207ENST00000430858 INHAP05111 366 aa11.63□□□□□ -0.55
HDAC6-207ENST00000430858 CCL5P13501 91 aa11.63□□□□□ -0.55
HDAC6-207ENST00000430858 ELNP15502 786 aa11.63□□□□□ -0.55
HDAC6-207ENST00000430858 EN2P19622 333 aaPredicted RBP11.63□□□□□ -0.55
HDAC6-207ENST00000430858 MTFR1Q15390 333 aa11.63□□□□□ -0.55
HDAC6-207ENST00000430858 MORN1Q5T089 497 aa11.63□□□□□ -0.55
HDAC6-207ENST00000430858 FAM83BQ5T0W9 1011 aa11.63□□□□□ -0.55
HDAC6-207ENST00000430858 TRMT44Q8IYL2 757 aaKnown RBP11.63□□□□□ -0.55
HDAC6-207ENST00000430858 GMCL1P1Q8NEA9 526 aa11.63□□□□□ -0.55
HDAC6-207ENST00000430858 SHCBP1Q8NEM2 672 aa11.63□□□□□ -0.55
HDAC6-207ENST00000430858 NKX2-3Q8TAU0 364 aa11.63□□□□□ -0.55
HDAC6-207ENST00000430858 ATG4CQ96DT6 458 aa11.63□□□□□ -0.55
HDAC6-207ENST00000430858 DSCC1Q9BVC3 393 aa11.63□□□□□ -0.55
HDAC6-207ENST00000430858 SPATC1LQ9H0A9 340 aa11.63□□□□□ -0.55
HDAC6-207ENST00000430858 PPP1R9AQ9ULJ8 1098 aa11.63□□□□□ -0.55
HDAC6-207ENST00000430858 ADAMTS5Q9UNA0 930 aa11.63□□□□□ -0.55
HDAC6-207ENST00000430858 IVNS1ABPQ9Y6Y0 642 aa11.63□□□□□ -0.55
HDAC6-207ENST00000430858 RANBP6O60518 1105 aaKnown RBP11.62□□□□□ -0.55
HDAC6-207ENST00000430858 HMGCRP04035 888 aa11.62□□□□□ -0.55
HDAC6-207ENST00000430858 GJB1P08034 283 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms