RNA–Protein interactions for RNA: ENST00000430682.5

SMPD4-204, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 820 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-204ENST00000430682 ROBO3Q96MS0 1386 aa15□□□□□ -0.01
SMPD4-204ENST00000430682 EEF2P13639 858 aaKnown RBP15□□□□□ -0.01
SMPD4-204ENST00000430682 ICA1Q05084 483 aa15□□□□□ -0.01
SMPD4-204ENST00000430682 GIMAP6Q6P9H5 292 aa15□□□□□ -0.01
SMPD4-204ENST00000430682 SPICE1Q8N0Z3 855 aa15□□□□□ -0.01
SMPD4-204ENST00000430682 CCDC17Q96LX7 622 aa15□□□□□ -0.01
SMPD4-204ENST00000430682 RNF208Q9H0X6 261 aa15□□□□□ -0.01
SMPD4-204ENST00000430682 RABGAP1Q9Y3P9 1069 aa15□□□□□ -0.01
SMPD4-204ENST00000430682 TACC3Q9Y6A5 838 aa15□□□□□ -0.01
SMPD4-204ENST00000430682 FRMPD3Q5JV73 1810 aa15□□□□□ -0.01
SMPD4-204ENST00000430682 PATL2C9JE40 543 aaKnown RBP14.99□□□□□ -0.01
SMPD4-204ENST00000430682 GJB1P08034 283 aa14.99□□□□□ -0.01
SMPD4-204ENST00000430682 CYP2B6P20813 491 aa14.99□□□□□ -0.01
SMPD4-204ENST00000430682 IRX6P78412 446 aaPredicted RBP14.99□□□□□ -0.01
SMPD4-204ENST00000430682 MORN1Q5T089 497 aa14.99□□□□□ -0.01
SMPD4-204ENST00000430682 VPS53Q5VIR6 699 aa14.99□□□□□ -0.01
SMPD4-204ENST00000430682 LBX2Q6XYB7 198 aa14.99□□□□□ -0.01
SMPD4-204ENST00000430682 GPR142Q7Z601 462 aa14.99□□□□□ -0.01
SMPD4-204ENST00000430682 TRIB2Q92519 343 aa14.99□□□□□ -0.01
SMPD4-204ENST00000430682 VCPKMTQ9H867 229 aa14.99□□□□□ -0.01
SMPD4-204ENST00000430682 PRDM1O75626 825 aa14.98□□□□□ -0.01
SMPD4-204ENST00000430682 GJA8P48165 433 aa14.98□□□□□ -0.01
SMPD4-204ENST00000430682 UBXN2AP68543 259 aa14.98□□□□□ -0.01
SMPD4-204ENST00000430682 CCL14Q16627 93 aa14.98□□□□□ -0.01
SMPD4-204ENST00000430682 UBE2Q1Q7Z7E8 422 aa14.98□□□□□ -0.01
SMPD4-204ENST00000430682 AMOTL1Q8IY63 956 aa14.98□□□□□ -0.01
SMPD4-204ENST00000430682 DDRGK1Q96HY6 314 aa14.98□□□□□ -0.01
SMPD4-204ENST00000430682 INCENPQ9NQS7 918 aa14.98□□□□□ -0.01
SMPD4-204ENST00000430682 FBXO28Q9NVF7 368 aa14.98□□□□□ -0.01
SMPD4-204ENST00000430682 PLXNA1Q9UIW2 1896 aa14.97□□□□□ -0.01
SMPD4-204ENST00000430682 SMCHD1A6NHR9 2005 aa14.97□□□□□ -0.01
SMPD4-204ENST00000430682 IGKV6D-41A0A0C4DH26 115 aa14.97□□□□□ -0.01
SMPD4-204ENST00000430682 APPP05067 770 aa14.97□□□□□ -0.01
SMPD4-204ENST00000430682 TDO2P48775 406 aa14.97□□□□□ -0.01
SMPD4-204ENST00000430682 ATP2B2Q01814 1243 aa14.97□□□□□ -0.01
SMPD4-204ENST00000430682 AAMPQ13685 434 aa14.97□□□□□ -0.01
SMPD4-204ENST00000430682 PLEKHH3Q7Z736 793 aa14.97□□□□□ -0.01
SMPD4-204ENST00000430682 PLEKHM2Q8IWE5 1019 aa14.97□□□□□ -0.01
SMPD4-204ENST00000430682 U2AF1L4Q8WU68 220 aaKnown RBP14.97□□□□□ -0.01
SMPD4-204ENST00000430682 FAM227BQ96M60 508 aa14.97□□□□□ -0.01
SMPD4-204ENST00000430682 DEFB118Q96PH6 123 aa14.97□□□□□ -0.01
SMPD4-204ENST00000430682 TANGO6Q9C0B7 1094 aa14.97□□□□□ -0.01
SMPD4-204ENST00000430682 ARHGEF10LQ9HCE6 1279 aa14.97□□□□□ -0.01
SMPD4-204ENST00000430682 PAK6Q9NQU5 681 aaPredicted RBP14.97□□□□□ -0.01
SMPD4-204ENST00000430682 A0A0D9SFI3 127 aa14.96□□□□□ -0.01
SMPD4-204ENST00000430682 SGPL1O95470 568 aa14.96□□□□□ -0.01
SMPD4-204ENST00000430682 GNAT2P19087 354 aa14.96□□□□□ -0.01
SMPD4-204ENST00000430682 MAPK4P31152 587 aa14.96□□□□□ -0.01
SMPD4-204ENST00000430682 DSG3P32926 999 aa14.96□□□□□ -0.01
SMPD4-204ENST00000430682 NUCB1Q02818 461 aa14.96□□□□□ -0.01
SMPD4-204ENST00000430682 COG2Q14746 738 aa14.96□□□□□ -0.01
SMPD4-204ENST00000430682 PRPF38BQ5VTL8 546 aaKnown RBP14.96□□□□□ -0.01
SMPD4-204ENST00000430682 CHD1LQ86WJ1 897 aa14.96□□□□□ -0.01
SMPD4-204ENST00000430682 GTF3C2Q8WUA4 911 aaPredicted RBP14.96□□□□□ -0.01
SMPD4-204ENST00000430682 EVI5LQ96CN4 794 aa14.96□□□□□ -0.01
SMPD4-204ENST00000430682 ATG4CQ96DT6 458 aa14.96□□□□□ -0.01
SMPD4-204ENST00000430682 NUP88Q99567 741 aaPredicted RBP14.96□□□□□ -0.01
SMPD4-204ENST00000430682 MOV10L1Q9BXT6 1211 aaKnown RBP14.96□□□□□ -0.01
SMPD4-204ENST00000430682 RWDD1Q9H446 243 aaPredicted RBP14.96□□□□□ -0.01
SMPD4-204ENST00000430682 KANSL2Q9H9L4 492 aa14.96□□□□□ -0.01
SMPD4-204ENST00000430682 FLRT1Q9NZU1 646 aa14.96□□□□□ -0.01
SMPD4-204ENST00000430682 ZNF236Q9UL36 1845 aa14.96□□□□□ -0.01
SMPD4-204ENST00000430682 HMGCRP04035 888 aa14.95□□□□□ -0.02
SMPD4-204ENST00000430682 CTDSPL2Q05D32 466 aa14.95□□□□□ -0.02
SMPD4-204ENST00000430682 MAP3K21Q5TCX8 1036 aa14.95□□□□□ -0.02
SMPD4-204ENST00000430682 NUDT12Q9BQG2 462 aa14.95□□□□□ -0.02
SMPD4-204ENST00000430682 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.95□□□□□ -0.021e-6■■■■■ 32
SMPD4-204ENST00000430682 MKNK2Q9HBH9 465 aa14.95□□□□□ -0.02
SMPD4-204ENST00000430682 ZBTB47Q9UFB7 747 aaPredicted RBP14.95□□□□□ -0.02
SMPD4-204ENST00000430682 WDR46O15213 610 aaKnown RBP14.94□□□□□ -0.02
SMPD4-204ENST00000430682 PTPREP23469 700 aa14.94□□□□□ -0.02
SMPD4-204ENST00000430682 PPARAQ07869 468 aa14.94□□□□□ -0.02
SMPD4-204ENST00000430682 NMIQ13287 307 aaPredicted RBP14.94□□□□□ -0.02
SMPD4-204ENST00000430682 FAM47AQ5JRC9 791 aa14.94□□□□□ -0.02
SMPD4-204ENST00000430682 FAM83BQ5T0W9 1011 aa14.94□□□□□ -0.02
SMPD4-204ENST00000430682 SAMD1Q6SPF0 538 aaPredicted RBP14.94□□□□□ -0.02
SMPD4-204ENST00000430682 ZNF589Q86UQ0 364 aaPredicted RBP14.94□□□□□ -0.02
SMPD4-204ENST00000430682 NPLOC4Q8TAT6 608 aa14.94□□□□□ -0.02
SMPD4-204ENST00000430682 NKX2-3Q8TAU0 364 aa14.94□□□□□ -0.02
SMPD4-204ENST00000430682 LPAR1Q92633 364 aa14.94□□□□□ -0.02
SMPD4-204ENST00000430682 CRISPLD2Q9H0B8 497 aa14.94□□□□□ -0.02
SMPD4-204ENST00000430682 HOXC10Q9NYD6 342 aa14.94□□□□□ -0.02
SMPD4-204ENST00000430682 ADAMTS5Q9UNA0 930 aa14.94□□□□□ -0.02
SMPD4-204ENST00000430682 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.94□□□□□ -0.02
SMPD4-204ENST00000430682 TRIOBPQ9H2D6 2365 aa14.93□□□□□ -0.02
SMPD4-204ENST00000430682 FLOT1O75955 427 aa14.93□□□□□ -0.02
SMPD4-204ENST00000430682 XRCC5P13010 732 aaKnown RBP14.93□□□□□ -0.02
SMPD4-204ENST00000430682 PDE4AP27815 886 aa14.93□□□□□ -0.02
SMPD4-204ENST00000430682 MNX1P50219 401 aaPredicted RBP14.93□□□□□ -0.02
SMPD4-204ENST00000430682 CACNB2Q08289 660 aaPredicted RBP14.93□□□□□ -0.02
SMPD4-204ENST00000430682 MAP2K5Q13163 448 aa14.93□□□□□ -0.02
SMPD4-204ENST00000430682 TMEM132BQ14DG7 1078 aa14.93□□□□□ -0.02
SMPD4-204ENST00000430682 LRRFIP1Q32MZ4 808 aaKnown RBP14.93□□□□□ -0.02
SMPD4-204ENST00000430682 WDR78Q5VTH9 848 aa14.93□□□□□ -0.02
SMPD4-204ENST00000430682 SOCS4Q8WXH5 440 aa14.93□□□□□ -0.02
SMPD4-204ENST00000430682 CEP95Q96GE4 821 aa14.93□□□□□ -0.02
SMPD4-204ENST00000430682 SPATC1LQ9H0A9 340 aa14.93□□□□□ -0.02
SMPD4-204ENST00000430682 NAPBQ9H115 298 aa14.93□□□□□ -0.02
SMPD4-204ENST00000430682 OSBPL3Q9H4L5 887 aa14.93□□□□□ -0.02
SMPD4-204ENST00000430682 NYAP2Q9P242 653 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms