RNA–Protein interactions for RNA: ENST00000430350.2

PRNP-203, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,539 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-203ENST00000430350 U2AF2P26368 475 aaKnown RBP eCLIP17.12■□□□□ 0.336e-7■■■□□ 15.4
PRNP-203ENST00000430350 GNL2Q13823 731 aaKnown RBP17.12■□□□□ 0.33
PRNP-203ENST00000430350 FTOQ9C0B1 505 aaKnown RBP eCLIP17.12■□□□□ 0.33
PRNP-203ENST00000430350 RTEL1Q9NZ71 1219 aa17.12■□□□□ 0.33
PRNP-203ENST00000430350 TAOK2Q9UL54 1235 aa17.12■□□□□ 0.33
PRNP-203ENST00000430350 VIL1P09327 827 aaKnown RBP17.12■□□□□ 0.33
PRNP-203ENST00000430350 SGIP1Q9BQI5 828 aa17.12■□□□□ 0.33
PRNP-203ENST00000430350 TMEM47Q9BQJ4 181 aa17.12■□□□□ 0.33
PRNP-203ENST00000430350 DHX36Q9H2U1 1008 aaKnown RBP17.12■□□□□ 0.33
PRNP-203ENST00000430350 PLIN4Q96Q06 1357 aa17.11■□□□□ 0.33
PRNP-203ENST00000430350 XBP1P17861 261 aa17.11■□□□□ 0.33
PRNP-203ENST00000430350 SAFBQ15424 915 aaKnown RBP eCLIP17.11■□□□□ 0.33
PRNP-203ENST00000430350 PKN1Q16512 942 aa17.11■□□□□ 0.33
PRNP-203ENST00000430350 CFAP100Q494V2 611 aa17.11■□□□□ 0.33
PRNP-203ENST00000430350 RBM43Q6ZSC3 357 aaKnown RBP17.11■□□□□ 0.33
PRNP-203ENST00000430350 SRBD1Q8N5C6 995 aaKnown RBP17.11■□□□□ 0.33
PRNP-203ENST00000430350 PGBD1Q96JS3 809 aa17.11■□□□□ 0.33
PRNP-203ENST00000430350 EHD4Q9H223 541 aa17.11■□□□□ 0.33
PRNP-203ENST00000430350 POLR3EQ9NVU0 708 aa17.11■□□□□ 0.33
PRNP-203ENST00000430350 OGFRQ9NZT2 677 aa17.11■□□□□ 0.33
PRNP-203ENST00000430350 PPP1R1BQ9UD71 204 aaPredicted RBP17.11■□□□□ 0.33
PRNP-203ENST00000430350 V9GY48 417 aaPredicted RBP17.11■□□□□ 0.33
PRNP-203ENST00000430350 CNTNAP5Q8WYK1 1306 aa17.11■□□□□ 0.33
PRNP-203ENST00000430350 COL4A5P29400 1685 aa17.11■□□□□ 0.33
PRNP-203ENST00000430350 SMTNL1A8MU46 457 aa17.11■□□□□ 0.33
PRNP-203ENST00000430350 PSMD14O00487 310 aa17.11■□□□□ 0.33
PRNP-203ENST00000430350 RAD17O75943 681 aa17.11■□□□□ 0.33
PRNP-203ENST00000430350 CAVIN2O95810 425 aa17.11■□□□□ 0.33
PRNP-203ENST00000430350 NIM1KQ8IY84 436 aa17.11■□□□□ 0.33
PRNP-203ENST00000430350 UPF1Q92900 1129 aaKnown RBP eCLIP17.11■□□□□ 0.334e-7■■■■□ 24.2
PRNP-203ENST00000430350 ZNRF3Q9ULT6 936 aa17.11■□□□□ 0.33
PRNP-203ENST00000430350 PYCARDQ9ULZ3 195 aa17.11■□□□□ 0.33
PRNP-203ENST00000430350 CD2APQ9Y5K6 639 aa17.11■□□□□ 0.33
PRNP-203ENST00000430350 MYH6P13533 1939 aa17.11■□□□□ 0.33
PRNP-203ENST00000430350 NOVP48745 357 aa17.1■□□□□ 0.33
PRNP-203ENST00000430350 CACNB3P54284 484 aa17.1■□□□□ 0.33
PRNP-203ENST00000430350 GRM4Q14833 912 aa17.1■□□□□ 0.33
PRNP-203ENST00000430350 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.1■□□□□ 0.33
PRNP-203ENST00000430350 GNAQP50148 359 aa17.1■□□□□ 0.33
PRNP-203ENST00000430350 GABPB1Q06547 395 aaPredicted RBP17.1■□□□□ 0.33
PRNP-203ENST00000430350 ZFPM1Q8IX07 1006 aa17.1■□□□□ 0.33
PRNP-203ENST00000430350 CEP95Q96GE4 821 aa17.1■□□□□ 0.33
PRNP-203ENST00000430350 FAM198AQ9UFP1 575 aa17.1■□□□□ 0.33
PRNP-203ENST00000430350 PAXBP1Q9Y5B6 917 aa17.1■□□□□ 0.33
PRNP-203ENST00000430350 BRCA1P38398 1863 aaKnown RBP17.1■□□□□ 0.33
PRNP-203ENST00000430350 AP5Z1O43299 807 aa17.09■□□□□ 0.33
PRNP-203ENST00000430350 YEATS4O95619 227 aa17.09■□□□□ 0.33
PRNP-203ENST00000430350 TOP1P11387 765 aaKnown RBP17.09■□□□□ 0.33
PRNP-203ENST00000430350 DIS3L2Q8IYB7 885 aaKnown RBP17.09■□□□□ 0.33
PRNP-203ENST00000430350 GMLQ99445 158 aa17.09■□□□□ 0.33
PRNP-203ENST00000430350 TAOK3Q9H2K8 898 aa17.09■□□□□ 0.33
PRNP-203ENST00000430350 FOXP1Q9H334 677 aaPredicted RBP17.09■□□□□ 0.33
PRNP-203ENST00000430350 PRDM10Q9NQV6 1147 aa17.09■□□□□ 0.33
PRNP-203ENST00000430350 KCNJ14Q9UNX9 436 aa17.09■□□□□ 0.33
PRNP-203ENST00000430350 TCP10Q12799 353 aa17.09■□□□□ 0.33
PRNP-203ENST00000430350 LINC00301Q8NCQ3 95 aa17.09■□□□□ 0.33
PRNP-203ENST00000430350 BICD2Q8TD16 824 aa17.09■□□□□ 0.33
PRNP-203ENST00000430350 TDRD3Q9H7E2 651 aaKnown RBP17.09■□□□□ 0.33
PRNP-203ENST00000430350 HDAC9Q9UKV0 1011 aa17.09■□□□□ 0.33
PRNP-203ENST00000430350 CDC25BP30305 580 aa17.08■□□□□ 0.33
PRNP-203ENST00000430350 SHMT1P34896 483 aa17.08■□□□□ 0.33
PRNP-203ENST00000430350 FAM193AP78312 1265 aa17.08■□□□□ 0.33
PRNP-203ENST00000430350 NOSTRINQ8IVI9 506 aa17.08■□□□□ 0.33
PRNP-203ENST00000430350 OGFOD1Q8N543 542 aa17.08■□□□□ 0.33
PRNP-203ENST00000430350 PRMT6Q96LA8 375 aaPredicted RBP17.08■□□□□ 0.33
PRNP-203ENST00000430350 PI4KBQ9UBF8 816 aa17.08■□□□□ 0.33
PRNP-203ENST00000430350 MAD2L2Q9UI95 211 aa17.08■□□□□ 0.33
PRNP-203ENST00000430350 CLIC4Q9Y696 253 aa17.08■□□□□ 0.33
PRNP-203ENST00000430350 hCG_1642624A0A1W2PR95 340 aa17.08■□□□□ 0.32
PRNP-203ENST00000430350 BTBD18B2RXH4 712 aa17.08■□□□□ 0.32
PRNP-203ENST00000430350 AKR1B1P15121 316 aa17.08■□□□□ 0.32
PRNP-203ENST00000430350 LIG1P18858 919 aa17.08■□□□□ 0.32
PRNP-203ENST00000430350 CBX1P83916 185 aa17.08■□□□□ 0.32
PRNP-203ENST00000430350 STK38Q15208 465 aa17.08■□□□□ 0.32
PRNP-203ENST00000430350 MAP3K11Q16584 847 aa17.08■□□□□ 0.32
PRNP-203ENST00000430350 KCNG4Q8TDN1 519 aa17.08■□□□□ 0.32
PRNP-203ENST00000430350 MTMR4Q9NYA4 1195 aa17.08■□□□□ 0.32
PRNP-203ENST00000430350 GOLGB1Q14789 3259 aaKnown RBP17.08■□□□□ 0.32
PRNP-203ENST00000430350 MYH8P13535 1937 aa17.08■□□□□ 0.32
PRNP-203ENST00000430350 ENTPD3O75355 529 aa17.07■□□□□ 0.32
PRNP-203ENST00000430350 ANO1Q5XXA6 986 aa17.07■□□□□ 0.32
PRNP-203ENST00000430350 C17orf53Q8N3J3 647 aaPredicted RBP17.07■□□□□ 0.32
PRNP-203ENST00000430350 STAG2Q8N3U4 1231 aa17.07■□□□□ 0.32
PRNP-203ENST00000430350 VPS54Q9P1Q0 977 aa17.07■□□□□ 0.32
PRNP-203ENST00000430350 CGNQ9P2M7 1197 aaKnown RBP17.07■□□□□ 0.32
PRNP-203ENST00000430350 FER1L6Q2WGJ9 1857 aa17.07■□□□□ 0.32
PRNP-203ENST00000430350 IGKV6D-41A0A0C4DH26 115 aa17.07■□□□□ 0.32
PRNP-203ENST00000430350 PALM3A6NDB9 673 aaPredicted RBP17.07■□□□□ 0.32
PRNP-203ENST00000430350 DDTLA6NHG4 134 aaPredicted RBP17.07■□□□□ 0.32
PRNP-203ENST00000430350 ME1P48163 572 aa17.07■□□□□ 0.32
PRNP-203ENST00000430350 ZSCAN29Q8IWY8 852 aaPredicted RBP17.07■□□□□ 0.32
PRNP-203ENST00000430350 AGBL3Q8NEM8 1001 aa17.07■□□□□ 0.32
PRNP-203ENST00000430350 TSC1Q92574 1164 aa17.07■□□□□ 0.32
PRNP-203ENST00000430350 LZTS2Q9BRK4 669 aa17.07■□□□□ 0.32
PRNP-203ENST00000430350 PHF20Q9BVI0 1012 aa17.07■□□□□ 0.32
PRNP-203ENST00000430350 DDX19AQ9NUU7 478 aaKnown RBP17.07■□□□□ 0.32
PRNP-203ENST00000430350 PSDA5PKW4 1024 aaPredicted RBP17.06■□□□□ 0.32
PRNP-203ENST00000430350 SPDYE2BA6NHP3 402 aa17.06■□□□□ 0.32
PRNP-203ENST00000430350 SPDYE6P0CI01 402 aa17.06■□□□□ 0.32
PRNP-203ENST00000430350 SCG2P13521 617 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms