RNA–Protein interactions for RNA: ENST00000429921.5

RPE-206, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 1 (best) BASIC

Gene RPE, Length 2,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-206ENST00000429921 CCDC186Q7Z3E2 898 aa11.63□□□□□ -0.55
RPE-206ENST00000429921 FOXP4Q8IVH2 680 aaPredicted RBP11.63□□□□□ -0.55
RPE-206ENST00000429921 USP40Q9NVE5 1235 aa11.63□□□□□ -0.55
RPE-206ENST00000429921 PODXL2Q9NZ53 605 aa11.63□□□□□ -0.55
RPE-206ENST00000429921 SERTAD1Q9UHV2 236 aa11.63□□□□□ -0.55
RPE-206ENST00000429921 FBXO2Q9UK22 296 aaPredicted RBP11.63□□□□□ -0.55
RPE-206ENST00000429921 KCNH3Q9ULD8 1083 aa11.63□□□□□ -0.55
RPE-206ENST00000429921 SRCAPQ6ZRS2 3230 aa11.63□□□□□ -0.55
RPE-206ENST00000429921 FRMPD2Q68DX3 1309 aaPredicted RBP11.63□□□□□ -0.55
RPE-206ENST00000429921 ADAMTSL1Q8N6G6 1762 aa11.63□□□□□ -0.55
RPE-206ENST00000429921 NPR1P16066 1061 aa11.63□□□□□ -0.55
RPE-206ENST00000429921 PPP4CP60510 307 aa11.63□□□□□ -0.55
RPE-206ENST00000429921 NFIAQ12857 509 aa11.63□□□□□ -0.55
RPE-206ENST00000429921 ZRSR1Q15695 479 aaKnown RBP11.63□□□□□ -0.55
RPE-206ENST00000429921 NPY5RQ15761 445 aa11.63□□□□□ -0.55
RPE-206ENST00000429921 AMOTL1Q8IY63 956 aa11.63□□□□□ -0.55
RPE-206ENST00000429921 LRRC47Q8N1G4 583 aaKnown RBP11.63□□□□□ -0.55
RPE-206ENST00000429921 KRI1Q8N9T8 703 aaKnown RBP11.63□□□□□ -0.55
RPE-206ENST00000429921 KLRG2A4D1S0 409 aaPredicted RBP11.62□□□□□ -0.55
RPE-206ENST00000429921 CYTH3O43739 400 aa11.62□□□□□ -0.55
RPE-206ENST00000429921 COBLO75128 1261 aa11.62□□□□□ -0.55
RPE-206ENST00000429921 MCM7P33993 719 aa11.62□□□□□ -0.55
RPE-206ENST00000429921 ZNF75DP51815 510 aa11.62□□□□□ -0.55
RPE-206ENST00000429921 CCDC144BQ3MJ40 725 aa11.62□□□□□ -0.55
RPE-206ENST00000429921 RESP18Q5W5W9 173 aa11.62□□□□□ -0.55
RPE-206ENST00000429921 HEATR3Q7Z4Q2 680 aa11.62□□□□□ -0.55
RPE-206ENST00000429921 METTL16Q86W50 562 aaKnown RBP11.62□□□□□ -0.55
RPE-206ENST00000429921 CNNM3Q8NE01 707 aa11.62□□□□□ -0.55
RPE-206ENST00000429921 CEP95Q96GE4 821 aa11.62□□□□□ -0.55
RPE-206ENST00000429921 FOXP1Q9H334 677 aaPredicted RBP11.62□□□□□ -0.55
RPE-206ENST00000429921 RGS17Q9UGC6 210 aaPredicted RBP11.62□□□□□ -0.55
RPE-206ENST00000429921 MAD2L2Q9UI95 211 aa11.62□□□□□ -0.55
RPE-206ENST00000429921 A0A087X0B3 334 aa11.62□□□□□ -0.55
RPE-206ENST00000429921 PLSCR1O15162 318 aa11.62□□□□□ -0.55
RPE-206ENST00000429921 CTAGE5O15320 804 aa11.62□□□□□ -0.55
RPE-206ENST00000429921 PPP6R2O75170 966 aa11.62□□□□□ -0.55
RPE-206ENST00000429921 DDAH1O94760 285 aa11.62□□□□□ -0.55
RPE-206ENST00000429921 SCG2P13521 617 aa11.62□□□□□ -0.55
RPE-206ENST00000429921 C15orf52Q6ZUT6 534 aaKnown RBP11.62□□□□□ -0.55
RPE-206ENST00000429921 DEFB132Q7Z7B7 95 aa11.62□□□□□ -0.55
RPE-206ENST00000429921 RBM28Q9NW13 759 aaKnown RBP11.62□□□□□ -0.55
RPE-206ENST00000429921 FAM205AQ6ZU69 1335 aa11.62□□□□□ -0.55
RPE-206ENST00000429921 NID2Q14112 1375 aa11.62□□□□□ -0.55
RPE-206ENST00000429921 LAMB1P07942 1786 aa11.61□□□□□ -0.55
RPE-206ENST00000429921 AFMP43652 599 aa11.61□□□□□ -0.55
RPE-206ENST00000429921 AOC3Q16853 763 aa11.61□□□□□ -0.55
RPE-206ENST00000429921 DHX58Q96C10 678 aa11.61□□□□□ -0.55
RPE-206ENST00000429921 UIMC1Q96RL1 719 aa11.61□□□□□ -0.55
RPE-206ENST00000429921 ANO10Q9NW15 660 aa11.61□□□□□ -0.55
RPE-206ENST00000429921 HPSEQ9Y251 543 aa11.61□□□□□ -0.55
RPE-206ENST00000429921 R3HCC1Q9Y3T6 440 aaKnown RBP11.61□□□□□ -0.55
RPE-206ENST00000429921 VWA3AA6NCI4 1184 aa11.61□□□□□ -0.55
RPE-206ENST00000429921 USP17L5A8MUK1 530 aa11.61□□□□□ -0.55
RPE-206ENST00000429921 MPHOSPH10O00566 681 aaKnown RBP11.61□□□□□ -0.55
RPE-206ENST00000429921 CUTAO60888 179 aa11.61□□□□□ -0.55
RPE-206ENST00000429921 CALM1P0DP23 149 aa11.61□□□□□ -0.55
RPE-206ENST00000429921 CALM2P0DP24 149 aa11.61□□□□□ -0.55
RPE-206ENST00000429921 CALM3P0DP25 149 aa11.61□□□□□ -0.55
RPE-206ENST00000429921 AKR1B1P15121 316 aa11.61□□□□□ -0.55
RPE-206ENST00000429921 PDE6BP35913 854 aa11.61□□□□□ -0.55
RPE-206ENST00000429921 JMYQ8N9B5 988 aa11.61□□□□□ -0.55
RPE-206ENST00000429921 MASTLQ96GX5 879 aa11.61□□□□□ -0.55
RPE-206ENST00000429921 XBP1P17861 261 aa11.6□□□□□ -0.55
RPE-206ENST00000429921 LMOD1P29536 600 aaPredicted RBP11.6□□□□□ -0.55
RPE-206ENST00000429921 RILPL1Q5EBL4 403 aa11.6□□□□□ -0.55
RPE-206ENST00000429921 FILIP1Q7Z7B0 1213 aa11.6□□□□□ -0.55
RPE-206ENST00000429921 PLIN2Q99541 437 aa11.6□□□□□ -0.55
RPE-206ENST00000429921 GPCPD1Q9NPB8 672 aa11.6□□□□□ -0.55
RPE-206ENST00000429921 CLIP2Q9UDT6 1046 aa11.6□□□□□ -0.55
RPE-206ENST00000429921 SCAF8Q9UPN6 1271 aaKnown RBP11.6□□□□□ -0.55
RPE-206ENST00000429921 PCDHA5Q9Y5H7 936 aa11.6□□□□□ -0.55
RPE-206ENST00000429921 MAST2Q6P0Q8 1798 aa11.6□□□□□ -0.55
RPE-206ENST00000429921 NAV1Q8NEY1 1877 aa11.6□□□□□ -0.55
RPE-206ENST00000429921 CDK5RAP2Q96SN8 1893 aa11.6□□□□□ -0.55
RPE-206ENST00000429921 TRIM75PA6NK02 468 aa11.6□□□□□ -0.55
RPE-206ENST00000429921 KLRF2D3W0D1 207 aa11.6□□□□□ -0.55
RPE-206ENST00000429921 C21orf2O43822 256 aa11.6□□□□□ -0.55
RPE-206ENST00000429921 ALDH1B1P30837 517 aa11.6□□□□□ -0.55
RPE-206ENST00000429921 PTGDRQ13258 359 aa11.6□□□□□ -0.55
RPE-206ENST00000429921 PFKFB3Q16875 520 aaPredicted RBP11.6□□□□□ -0.55
RPE-206ENST00000429921 WWC2Q6AWC2 1192 aa11.6□□□□□ -0.55
RPE-206ENST00000429921 CDC42EP5Q6NZY7 148 aa11.6□□□□□ -0.55
RPE-206ENST00000429921 KRBA2Q6ZNG9 492 aa11.6□□□□□ -0.55
RPE-206ENST00000429921 CEP57L1Q8IYX8 460 aa11.6□□□□□ -0.55
RPE-206ENST00000429921 MTA3Q9BTC8 594 aa11.6□□□□□ -0.55
RPE-206ENST00000429921 COA1Q9GZY4 146 aa11.6□□□□□ -0.55
RPE-206ENST00000429921 H0YIN7 160 aa11.59□□□□□ -0.55
RPE-206ENST00000429921 ATP1A3P13637 1013 aa11.59□□□□□ -0.55
RPE-206ENST00000429921 BMP6P22004 513 aa11.59□□□□□ -0.55
RPE-206ENST00000429921 PTPREP23469 700 aa11.59□□□□□ -0.55
RPE-206ENST00000429921 HS1BP3Q53T59 392 aa11.59□□□□□ -0.55
RPE-206ENST00000429921 DNTTIP2Q5QJE6 756 aaKnown RBP11.59□□□□□ -0.55
RPE-206ENST00000429921 TTC38Q5R3I4 469 aa11.59□□□□□ -0.55
RPE-206ENST00000429921 C16orf86Q6ZW13 317 aa11.59□□□□□ -0.55
RPE-206ENST00000429921 PLA2G4DQ86XP0 818 aa11.59□□□□□ -0.55
RPE-206ENST00000429921 TMX4Q9H1E5 349 aaPredicted RBP11.59□□□□□ -0.55
RPE-206ENST00000429921 COL11A2P13942 1736 aaPredicted RBP11.59□□□□□ -0.55
RPE-206ENST00000429921 PCP11498 1178 aaKnown RBP11.59□□□□□ -0.55
RPE-206ENST00000429921 NLRP12P59046 1061 aa11.59□□□□□ -0.55
RPE-206ENST00000429921 IL17AQ16552 155 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms