RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 MFSD14CQ5VZR4 134 aa17.96■□□□□ 0.47
MSH5-208ENST00000429846 MB21D1Q8N884 522 aa17.96■□□□□ 0.47
MSH5-208ENST00000429846 DDRGK1Q96HY6 314 aa17.96■□□□□ 0.47
MSH5-208ENST00000429846 CCDC17Q96LX7 622 aa17.96■□□□□ 0.47
MSH5-208ENST00000429846 ARMT1Q9H993 441 aa17.96■□□□□ 0.47
MSH5-208ENST00000429846 ARHGEF10LQ9HCE6 1279 aa17.96■□□□□ 0.47
MSH5-208ENST00000429846 HOXC10Q9NYD6 342 aa17.96■□□□□ 0.47
MSH5-208ENST00000429846 PFASO15067 1338 aa17.96■□□□□ 0.46
MSH5-208ENST00000429846 A0A1W2PRG0 241 aa17.95■□□□□ 0.46
MSH5-208ENST00000429846 COL6A1P12109 1028 aa17.95■□□□□ 0.46
MSH5-208ENST00000429846 CCND3P30281 292 aaPredicted RBP17.95■□□□□ 0.46
MSH5-208ENST00000429846 BMP8BP34820 402 aa17.95■□□□□ 0.46
MSH5-208ENST00000429846 LHX8Q68G74 356 aa17.95■□□□□ 0.46
MSH5-208ENST00000429846 ZSCAN25Q6NSZ9 544 aa17.95■□□□□ 0.46
MSH5-208ENST00000429846 SLC44A5Q8NCS7 719 aa17.95■□□□□ 0.46
MSH5-208ENST00000429846 GDF15Q99988 308 aa17.95■□□□□ 0.46
MSH5-208ENST00000429846 LRRCC1Q9C099 1032 aa17.95■□□□□ 0.46
MSH5-208ENST00000429846 TANGO6Q9C0B7 1094 aa17.95■□□□□ 0.46
MSH5-208ENST00000429846 STRNO43815 780 aa17.94■□□□□ 0.46
MSH5-208ENST00000429846 CYP2D6P10635 497 aa17.94■□□□□ 0.46
MSH5-208ENST00000429846 EVX2Q03828 476 aa17.94■□□□□ 0.46
MSH5-208ENST00000429846 ICA1Q05084 483 aa17.94■□□□□ 0.46
MSH5-208ENST00000429846 SHCBP1Q8NEM2 672 aa17.94■□□□□ 0.46
MSH5-208ENST00000429846 BCL11AQ9H165 835 aa17.94■□□□□ 0.46
MSH5-208ENST00000429846 STAP2Q9UGK3 403 aa17.94■□□□□ 0.46
MSH5-208ENST00000429846 ATP2B2Q01814 1243 aa17.93■□□□□ 0.46
MSH5-208ENST00000429846 C12orf60Q5U649 245 aa17.93■□□□□ 0.46
MSH5-208ENST00000429846 SPATC1LQ9H0A9 340 aa17.93■□□□□ 0.46
MSH5-208ENST00000429846 TMX2Q9Y320 296 aa17.93■□□□□ 0.46
MSH5-208ENST00000429846 PRKAB2O43741 272 aa17.92■□□□□ 0.46
MSH5-208ENST00000429846 AKR1B1P15121 316 aa17.92■□□□□ 0.46
MSH5-208ENST00000429846 C16orf86Q6ZW13 317 aa17.92■□□□□ 0.46
MSH5-208ENST00000429846 DYNLL2Q96FJ2 89 aa17.92■□□□□ 0.46
MSH5-208ENST00000429846 MOV10L1Q9BXT6 1211 aaKnown RBP17.92■□□□□ 0.46
MSH5-208ENST00000429846 VCPKMTQ9H867 229 aa17.92■□□□□ 0.46
MSH5-208ENST00000429846 FLRT1Q9NZU1 646 aa17.92■□□□□ 0.46
MSH5-208ENST00000429846 DDX20Q9UHI6 824 aaKnown RBP17.92■□□□□ 0.46
MSH5-208ENST00000429846 ZMYND8Q9ULU4 1186 aaPredicted RBP17.92■□□□□ 0.46
MSH5-208ENST00000429846 SZT2Q5T011 3432 aa17.91■□□□□ 0.46
MSH5-208ENST00000429846 USP17L12C9JPN9 530 aa17.91■□□□□ 0.46
MSH5-208ENST00000429846 USP17L21D6R901 530 aa17.91■□□□□ 0.46
MSH5-208ENST00000429846 WDR46O15213 610 aaKnown RBP17.91■□□□□ 0.46
MSH5-208ENST00000429846 FLOT1O75955 427 aa17.91■□□□□ 0.46
MSH5-208ENST00000429846 DSG3P32926 999 aa17.91■□□□□ 0.46
MSH5-208ENST00000429846 CDK8P49336 464 aa17.91■□□□□ 0.46
MSH5-208ENST00000429846 OLFML2BQ68BL8 750 aa17.91■□□□□ 0.46
MSH5-208ENST00000429846 DPP9Q86TI2 863 aa17.91■□□□□ 0.46
MSH5-208ENST00000429846 NPLOC4Q8TAT6 608 aa17.91■□□□□ 0.46
MSH5-208ENST00000429846 MROH8Q9H579 483 aa17.91■□□□□ 0.46
MSH5-208ENST00000429846 SLC5A4Q9NY91 659 aa17.91■□□□□ 0.46
MSH5-208ENST00000429846 ARPP21Q9UBL0 812 aaPredicted RBP17.91■□□□□ 0.46
MSH5-208ENST00000429846 GREB1LQ9C091 1923 aaPredicted RBP17.91■□□□□ 0.46
MSH5-208ENST00000429846 IGHA2P01877 340 aa17.9■□□□□ 0.46
MSH5-208ENST00000429846 ERCC3P19447 782 aa17.9■□□□□ 0.46
MSH5-208ENST00000429846 ADORA2AP29274 412 aa17.9■□□□□ 0.46
MSH5-208ENST00000429846 SLFNL1Q499Z3 407 aa17.9■□□□□ 0.46
MSH5-208ENST00000429846 ABRAQ8N0Z2 381 aa17.9■□□□□ 0.46
MSH5-208ENST00000429846 KANSL2Q9H9L4 492 aa17.9■□□□□ 0.46
MSH5-208ENST00000429846 ECHDC1Q9NTX5 307 aa17.9■□□□□ 0.46
MSH5-208ENST00000429846 SLC4A4Q9Y6R1 1079 aa17.9■□□□□ 0.46
MSH5-208ENST00000429846 COL11A1P12107 1806 aaPredicted RBP17.9■□□□□ 0.46
MSH5-208ENST00000429846 CYBAP13498 195 aa17.89■□□□□ 0.45
MSH5-208ENST00000429846 SYN1P17600 705 aa17.89■□□□□ 0.45
MSH5-208ENST00000429846 KIAA1755Q5JYT7 1200 aa17.89■□□□□ 0.45
MSH5-208ENST00000429846 GPR153Q6NV75 609 aa17.89■□□□□ 0.45
MSH5-208ENST00000429846 SIAH1Q8IUQ4 282 aa17.89■□□□□ 0.45
MSH5-208ENST00000429846 SPICE1Q8N0Z3 855 aa17.89■□□□□ 0.45
MSH5-208ENST00000429846 GPATCH3Q96I76 525 aa17.89■□□□□ 0.45
MSH5-208ENST00000429846 PUS7LQ9H0K6 701 aaKnown RBP17.89■□□□□ 0.45
MSH5-208ENST00000429846 CYP2D7A0A087X1C5 515 aa17.88■□□□□ 0.45
MSH5-208ENST00000429846 DNM1LO00429 736 aa17.88■□□□□ 0.45
MSH5-208ENST00000429846 CNGA1P29973 690 aa17.88■□□□□ 0.45
MSH5-208ENST00000429846 CYP2C19P33261 490 aa17.88■□□□□ 0.45
MSH5-208ENST00000429846 MAGEA10P43363 369 aaPredicted RBP17.88■□□□□ 0.45
MSH5-208ENST00000429846 C20orf194Q5TEA3 1177 aa17.88■□□□□ 0.45
MSH5-208ENST00000429846 CTR9Q6PD62 1173 aa17.88■□□□□ 0.45
MSH5-208ENST00000429846 CLEC10AQ8IUN9 316 aa17.88■□□□□ 0.45
MSH5-208ENST00000429846 ATG4CQ96DT6 458 aa17.88■□□□□ 0.45
MSH5-208ENST00000429846 GOPCQ9HD26 462 aa17.88■□□□□ 0.45
MSH5-208ENST00000429846 SOX1O00570 391 aaPredicted RBP17.87■□□□□ 0.45
MSH5-208ENST00000429846 SLC25A27O95847 323 aa17.87■□□□□ 0.45
MSH5-208ENST00000429846 CHGBP05060 677 aa17.87■□□□□ 0.45
MSH5-208ENST00000429846 PLS1Q14651 629 aa17.87■□□□□ 0.45
MSH5-208ENST00000429846 LRRC26Q2I0M4 334 aa17.87■□□□□ 0.45
MSH5-208ENST00000429846 LRIT3Q3SXY7 679 aa17.87■□□□□ 0.45
MSH5-208ENST00000429846 GIMAP6Q6P9H5 292 aa17.87■□□□□ 0.45
MSH5-208ENST00000429846 TDHQ8IZJ6 230 aa17.87■□□□□ 0.45
MSH5-208ENST00000429846 KBTBD3Q8NAB2 608 aa17.87■□□□□ 0.45
MSH5-208ENST00000429846 ZNFX1Q9P2E3 1918 aaKnown RBP17.87■□□□□ 0.45
MSH5-208ENST00000429846 ROBO3Q96MS0 1386 aa17.87■□□□□ 0.45
MSH5-208ENST00000429846 SMARCA5O60264 1052 aaPredicted RBP17.86■□□□□ 0.45
MSH5-208ENST00000429846 EEF2P13639 858 aaKnown RBP17.86■□□□□ 0.45
MSH5-208ENST00000429846 SBK1Q52WX2 424 aa17.86■□□□□ 0.45
MSH5-208ENST00000429846 NCAPG2Q86XI2 1143 aa17.86■□□□□ 0.45
MSH5-208ENST00000429846 LRCH3Q96II8 777 aa17.86■□□□□ 0.45
MSH5-208ENST00000429846 ADAMTS5Q9UNA0 930 aa17.86■□□□□ 0.45
MSH5-208ENST00000429846 SEPT4O43236 478 aa17.85■□□□□ 0.45
MSH5-208ENST00000429846 ZFYP08048 801 aaPredicted RBP17.85■□□□□ 0.45
MSH5-208ENST00000429846 FCER1AP12319 257 aa17.85■□□□□ 0.45
MSH5-208ENST00000429846 COPB2P35606 906 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms