RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 L2HGDHQ9H9P8 463 aa9.98□□□□□ -0.81
GABPB1-205ENST00000429662 DDX41Q9UJV9 622 aaKnown RBP9.98□□□□□ -0.81
GABPB1-205ENST00000429662 CEP131Q9UPN4 1083 aa9.98□□□□□ -0.81
GABPB1-205ENST00000429662 GOLGA8AA7E2F4 631 aa9.97□□□□□ -0.81
GABPB1-205ENST00000429662 KIF28PB7ZC32 967 aa9.97□□□□□ -0.81
GABPB1-205ENST00000429662 IRS4O14654 1257 aaPredicted RBP9.97□□□□□ -0.81
GABPB1-205ENST00000429662 FMNL1O95466 1100 aaPredicted RBP9.97□□□□□ -0.81
GABPB1-205ENST00000429662 APPP05067 770 aa9.97□□□□□ -0.81
GABPB1-205ENST00000429662 SLC5A1P13866 664 aa9.97□□□□□ -0.81
GABPB1-205ENST00000429662 PDE6AP16499 860 aa9.97□□□□□ -0.81
GABPB1-205ENST00000429662 ZSCAN20P17040 1043 aaPredicted RBP9.97□□□□□ -0.81
GABPB1-205ENST00000429662 IFNAR1P17181 557 aa9.97□□□□□ -0.81
GABPB1-205ENST00000429662 CBX1P83916 185 aa9.97□□□□□ -0.81
GABPB1-205ENST00000429662 SCARF1Q14162 830 aa9.97□□□□□ -0.81
GABPB1-205ENST00000429662 RILPL1Q5EBL4 403 aa9.97□□□□□ -0.81
GABPB1-205ENST00000429662 TMEM67Q5HYA8 995 aa9.97□□□□□ -0.81
GABPB1-205ENST00000429662 OTUD7BQ6GQQ9 843 aa9.97□□□□□ -0.81
GABPB1-205ENST00000429662 TRIM22Q8IYM9 498 aa9.97□□□□□ -0.81
GABPB1-205ENST00000429662 VGLL2Q8N8G2 317 aa9.97□□□□□ -0.81
GABPB1-205ENST00000429662 KRI1Q8N9T8 703 aaKnown RBP9.97□□□□□ -0.81
GABPB1-205ENST00000429662 IGDCC4Q8TDY8 1250 aa9.97□□□□□ -0.81
GABPB1-205ENST00000429662 STRBPQ96SI9 672 aaKnown RBP9.97□□□□□ -0.81
GABPB1-205ENST00000429662 MAP3K14Q99558 947 aa9.97□□□□□ -0.81
GABPB1-205ENST00000429662 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.97□□□□□ -0.81
GABPB1-205ENST00000429662 TAOK3Q9H2K8 898 aa9.97□□□□□ -0.81
GABPB1-205ENST00000429662 FOXP1Q9H334 677 aaPredicted RBP9.97□□□□□ -0.81
GABPB1-205ENST00000429662 RNF41Q9H4P4 317 aaPredicted RBP9.97□□□□□ -0.81
GABPB1-205ENST00000429662 GPHNQ9NQX3 736 aaPredicted RBP9.97□□□□□ -0.81
GABPB1-205ENST00000429662 NARFQ9UHQ1 456 aa9.97□□□□□ -0.81
GABPB1-205ENST00000429662 PRDM4Q9UKN5 801 aa9.97□□□□□ -0.81
GABPB1-205ENST00000429662 SLC12A7Q9Y666 1083 aa9.97□□□□□ -0.81
GABPB1-205ENST00000429662 NEDD4P46934 1319 aa9.97□□□□□ -0.81
GABPB1-205ENST00000429662 PHLPP2Q6ZVD8 1323 aa9.97□□□□□ -0.81
GABPB1-205ENST00000429662 ZNF532Q9HCE3 1301 aa9.97□□□□□ -0.81
GABPB1-205ENST00000429662 TCRBV5S4A2TA0A5A2 114 aa9.96□□□□□ -0.82
GABPB1-205ENST00000429662 ERICH2A1L162 156 aa9.96□□□□□ -0.82
GABPB1-205ENST00000429662 RGL2O15211 777 aa9.96□□□□□ -0.82
GABPB1-205ENST00000429662 WDHD1O75717 1129 aaPredicted RBP9.96□□□□□ -0.82
GABPB1-205ENST00000429662 SERPINC1P01008 464 aa9.96□□□□□ -0.82
GABPB1-205ENST00000429662 EPHX2P34913 555 aa9.96□□□□□ -0.82
GABPB1-205ENST00000429662 SOX10P56693 466 aa9.96□□□□□ -0.82
GABPB1-205ENST00000429662 UBASH3AP57075 661 aa9.96□□□□□ -0.82
GABPB1-205ENST00000429662 ARID5BQ14865 1188 aa9.96□□□□□ -0.82
GABPB1-205ENST00000429662 NTRK3Q16288 839 aa9.96□□□□□ -0.82
GABPB1-205ENST00000429662 KRBA2Q6ZNG9 492 aa9.96□□□□□ -0.82
GABPB1-205ENST00000429662 CYB5R4Q7L1T6 521 aa9.96□□□□□ -0.82
GABPB1-205ENST00000429662 TBC1D10CQ8IV04 446 aa9.96□□□□□ -0.82
GABPB1-205ENST00000429662 DNAJC10Q8IXB1 793 aa9.96□□□□□ -0.82
GABPB1-205ENST00000429662 MLKLQ8NB16 471 aa9.96□□□□□ -0.82
GABPB1-205ENST00000429662 CNNM3Q8NE01 707 aa9.96□□□□□ -0.82
GABPB1-205ENST00000429662 PPP1R13BQ96KQ4 1090 aa9.96□□□□□ -0.82
GABPB1-205ENST00000429662 GPR101Q96P66 508 aaPredicted RBP9.96□□□□□ -0.82
GABPB1-205ENST00000429662 NAPBQ9H115 298 aa9.96□□□□□ -0.82
GABPB1-205ENST00000429662 LY9Q9HBG7 655 aa9.96□□□□□ -0.82
GABPB1-205ENST00000429662 DDX60Q8IY21 1712 aaKnown RBP9.96□□□□□ -0.82
GABPB1-205ENST00000429662 FAM177BA6PVY3 158 aa9.95□□□□□ -0.82
GABPB1-205ENST00000429662 IFIT3O14879 490 aaKnown RBP9.95□□□□□ -0.82
GABPB1-205ENST00000429662 IDH1O75874 414 aaKnown RBP9.95□□□□□ -0.82
GABPB1-205ENST00000429662 DEXIO95424 95 aa9.95□□□□□ -0.82
GABPB1-205ENST00000429662 BMP15O95972 392 aa9.95□□□□□ -0.82
GABPB1-205ENST00000429662 TOP1P11387 765 aaKnown RBP9.95□□□□□ -0.82
GABPB1-205ENST00000429662 XBP1P17861 261 aa9.95□□□□□ -0.82
GABPB1-205ENST00000429662 FGFR2P21802 821 aa9.95□□□□□ -0.82
GABPB1-205ENST00000429662 IL6STP40189 918 aaPredicted RBP9.95□□□□□ -0.82
GABPB1-205ENST00000429662 AKNAD1Q5T1N1 836 aa9.95□□□□□ -0.82
GABPB1-205ENST00000429662 NT5DC1Q5TFE4 455 aa9.95□□□□□ -0.82
GABPB1-205ENST00000429662 E4F1Q66K89 784 aaPredicted RBP9.95□□□□□ -0.82
GABPB1-205ENST00000429662 ARMCX5Q6P1M9 558 aa9.95□□□□□ -0.82
GABPB1-205ENST00000429662 SHC4Q6S5L8 630 aa9.95□□□□□ -0.82
GABPB1-205ENST00000429662 NOSTRINQ8IVI9 506 aa9.95□□□□□ -0.82
GABPB1-205ENST00000429662 VSTM4Q8IW00 320 aa9.95□□□□□ -0.82
GABPB1-205ENST00000429662 IFNL3Q8IZI9 196 aa9.95□□□□□ -0.82
GABPB1-205ENST00000429662 STAG1Q8WVM7 1258 aa9.95□□□□□ -0.82
GABPB1-205ENST00000429662 ZIC5Q96T25 663 aa9.95□□□□□ -0.82
GABPB1-205ENST00000429662 NBPF3Q9H094 633 aa9.95□□□□□ -0.82
GABPB1-205ENST00000429662 TMX1Q9H3N1 280 aa9.95□□□□□ -0.82
GABPB1-205ENST00000429662 GREM2Q9H772 168 aa9.95□□□□□ -0.82
GABPB1-205ENST00000429662 PIH1D3Q9NQM4 214 aaKnown RBP9.95□□□□□ -0.82
GABPB1-205ENST00000429662 TRMT1Q9NXH9 659 aaKnown RBP9.95□□□□□ -0.82
GABPB1-205ENST00000429662 ZNF215Q9UL58 517 aaPredicted RBP9.95□□□□□ -0.82
GABPB1-205ENST00000429662 KCNH3Q9ULD8 1083 aa9.95□□□□□ -0.82
GABPB1-205ENST00000429662 TLL2Q9Y6L7 1015 aa9.95□□□□□ -0.82
GABPB1-205ENST00000429662 USP27XA6NNY8 438 aa9.94□□□□□ -0.82
GABPB1-205ENST00000429662 B4E1Z4 1266 aa9.94□□□□□ -0.82
GABPB1-205ENST00000429662 H0YIN7 160 aa9.94□□□□□ -0.82
GABPB1-205ENST00000429662 ARHGAP6O43182 974 aa9.94□□□□□ -0.82
GABPB1-205ENST00000429662 ATP8B1O43520 1251 aa9.94□□□□□ -0.82
GABPB1-205ENST00000429662 MMP1P03956 469 aa9.94□□□□□ -0.82
GABPB1-205ENST00000429662 PCP11498 1178 aaKnown RBP9.94□□□□□ -0.82
GABPB1-205ENST00000429662 CYP19A1P11511 503 aaPredicted RBP9.94□□□□□ -0.82
GABPB1-205ENST00000429662 MARCKSP29966 332 aaPredicted RBP9.94□□□□□ -0.82
GABPB1-205ENST00000429662 CDC27P30260 824 aa9.94□□□□□ -0.82
GABPB1-205ENST00000429662 ETF1P62495 437 aaKnown RBP9.94□□□□□ -0.82
GABPB1-205ENST00000429662 DGKZQ13574 1117 aa9.94□□□□□ -0.82
GABPB1-205ENST00000429662 CCDC93Q567U6 631 aa9.94□□□□□ -0.82
GABPB1-205ENST00000429662 EAPPQ56P03 285 aaPredicted RBP9.94□□□□□ -0.82
GABPB1-205ENST00000429662 TAF3Q5VWG9 929 aa9.94□□□□□ -0.82
GABPB1-205ENST00000429662 MFSD6Q6ZSS7 791 aa9.94□□□□□ -0.82
GABPB1-205ENST00000429662 KRT222Q8N1A0 295 aa9.94□□□□□ -0.82
GABPB1-205ENST00000429662 SPATA5Q8NB90 893 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms