RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 EME2A4GXA9 379 aaPredicted RBP18.01■□□□□ 0.47
C9orf3-206ENST00000428313 PDE2AO00408 941 aaPredicted RBP18.01■□□□□ 0.47
C9orf3-206ENST00000428313 NR1D1P20393 614 aa18.01■□□□□ 0.47
C9orf3-206ENST00000428313 GUCY1A3Q02108 690 aa18.01■□□□□ 0.47
C9orf3-206ENST00000428313 E2F5Q15329 346 aa18.01■□□□□ 0.47
C9orf3-206ENST00000428313 SPECC1Q5M775 1068 aa18.01■□□□□ 0.47
C9orf3-206ENST00000428313 LMBR1Q8WVP7 490 aa18.01■□□□□ 0.47
C9orf3-206ENST00000428313 SUCLG2Q96I99 432 aa18.01■□□□□ 0.47
C9orf3-206ENST00000428313 ZIM3Q96PE6 472 aa18.01■□□□□ 0.47
C9orf3-206ENST00000428313 EYA1Q99502 592 aa18.01■□□□□ 0.47
C9orf3-206ENST00000428313 EBF2Q9HAK2 575 aa18.01■□□□□ 0.47
C9orf3-206ENST00000428313 IBSPP21815 317 aaPredicted RBP18.01■□□□□ 0.47
C9orf3-206ENST00000428313 C2orf54Q08AI8 447 aa18.01■□□□□ 0.47
C9orf3-206ENST00000428313 CUL4BQ13620 913 aa18.01■□□□□ 0.47
C9orf3-206ENST00000428313 TXNDC2Q86VQ3 553 aa18.01■□□□□ 0.47
C9orf3-206ENST00000428313 OR8K1Q8NGG5 319 aa18.01■□□□□ 0.47
C9orf3-206ENST00000428313 SPDL1Q96EA4 605 aa18.01■□□□□ 0.47
C9orf3-206ENST00000428313 CYFIP2Q96F07 1278 aa18.01■□□□□ 0.47
C9orf3-206ENST00000428313 KAZALD1Q96I82 304 aa18.01■□□□□ 0.47
C9orf3-206ENST00000428313 GJB4Q9NTQ9 266 aa18.01■□□□□ 0.47
C9orf3-206ENST00000428313 HAUS2Q9NVX0 235 aa18.01■□□□□ 0.47
C9orf3-206ENST00000428313 TRIM10Q9UDY6 481 aa18.01■□□□□ 0.47
C9orf3-206ENST00000428313 GOLGA8BA8MQT2 603 aa18■□□□□ 0.47
C9orf3-206ENST00000428313 PES1O00541 588 aaKnown RBP18■□□□□ 0.47
C9orf3-206ENST00000428313 MPHOSPH10O00566 681 aaKnown RBP18■□□□□ 0.47
C9orf3-206ENST00000428313 DNAJC8O75937 253 aaPredicted RBP18■□□□□ 0.47
C9orf3-206ENST00000428313 SH2D3CQ8N5H7 860 aa18■□□□□ 0.47
C9orf3-206ENST00000428313 KBTBD3Q8NAB2 608 aa18■□□□□ 0.47
C9orf3-206ENST00000428313 NUP88Q99567 741 aaPredicted RBP18■□□□□ 0.47
C9orf3-206ENST00000428313 EIF4A1P60842 406 aaKnown RBP18■□□□□ 0.47
C9orf3-206ENST00000428313 GLE1Q53GS7 698 aaKnown RBP18■□□□□ 0.47
C9orf3-206ENST00000428313 CCDC122Q5T0U0 273 aa18■□□□□ 0.47
C9orf3-206ENST00000428313 CRELD2Q6UXH1 353 aaPredicted RBP18■□□□□ 0.47
C9orf3-206ENST00000428313 CHST3Q7LGC8 479 aa18■□□□□ 0.47
C9orf3-206ENST00000428313 CCDC47Q96A33 483 aaKnown RBP18■□□□□ 0.47
C9orf3-206ENST00000428313 AIDAQ96BJ3 306 aa18■□□□□ 0.47
C9orf3-206ENST00000428313 LIMA1Q9UHB6 759 aaKnown RBP18■□□□□ 0.47
C9orf3-206ENST00000428313 SERTAD1Q9UHV2 236 aa18■□□□□ 0.47
C9orf3-206ENST00000428313 DBNLQ9UJU6 430 aaKnown RBP18■□□□□ 0.47
C9orf3-206ENST00000428313 MYO5AQ9Y4I1 1855 aaKnown RBP18■□□□□ 0.47
C9orf3-206ENST00000428313 NCKAP5LQ9HCH0 1330 aa17.99■□□□□ 0.47
C9orf3-206ENST00000428313 KLF18A0A0U1RQI7 1052 aa17.99■□□□□ 0.47
C9orf3-206ENST00000428313 GRM8O00222 908 aa17.99■□□□□ 0.47
C9orf3-206ENST00000428313 KRT86O43790 486 aa17.99■□□□□ 0.47
C9orf3-206ENST00000428313 PECAM1P16284 738 aaPredicted RBP17.99■□□□□ 0.47
C9orf3-206ENST00000428313 PRPHP41219 470 aa17.99■□□□□ 0.47
C9orf3-206ENST00000428313 KRT83P78385 493 aa17.99■□□□□ 0.47
C9orf3-206ENST00000428313 MAP3K2Q9Y2U5 619 aa17.99■□□□□ 0.47
C9orf3-206ENST00000428313 PTPRUQ92729 1446 aa17.99■□□□□ 0.47
C9orf3-206ENST00000428313 LRRC10BA6NIK2 292 aa17.98■□□□□ 0.47
C9orf3-206ENST00000428313 HMGB1P1B2RPK0 211 aaPredicted RBP17.98■□□□□ 0.47
C9orf3-206ENST00000428313 GHRP10912 638 aa17.98■□□□□ 0.47
C9orf3-206ENST00000428313 KRT9P35527 623 aa17.98■□□□□ 0.47
C9orf3-206ENST00000428313 IQCKQ8N0W5 287 aa17.98■□□□□ 0.47
C9orf3-206ENST00000428313 OSBPL7Q9BZF2 842 aa17.98■□□□□ 0.47
C9orf3-206ENST00000428313 CPSF2Q9P2I0 782 aaKnown RBP17.98■□□□□ 0.47
C9orf3-206ENST00000428313 DNM1LO00429 736 aa17.98■□□□□ 0.47
C9orf3-206ENST00000428313 PPP1R12BO60237 982 aaPredicted RBP17.98■□□□□ 0.47
C9orf3-206ENST00000428313 SKAP2O75563 359 aaPredicted RBP17.98■□□□□ 0.47
C9orf3-206ENST00000428313 SCTRP47872 440 aa17.98■□□□□ 0.47
C9orf3-206ENST00000428313 HERVK_113P62684 666 aa17.98■□□□□ 0.47
C9orf3-206ENST00000428313 KRT40Q6A162 431 aa17.98■□□□□ 0.47
C9orf3-206ENST00000428313 KSR2Q6VAB6 950 aa17.98■□□□□ 0.47
C9orf3-206ENST00000428313 MREGQ8N565 214 aa17.98■□□□□ 0.47
C9orf3-206ENST00000428313 STIM2Q9P246 746 aa17.98■□□□□ 0.47
C9orf3-206ENST00000428313 DMGDHQ9UI17 866 aaKnown RBP17.98■□□□□ 0.47
C9orf3-206ENST00000428313 BCL9LQ86UU0 1499 aa17.98■□□□□ 0.47
C9orf3-206ENST00000428313 MST1RQ04912 1400 aa17.98■□□□□ 0.47
C9orf3-206ENST00000428313 E7EVH7 732 aa17.97■□□□□ 0.47
C9orf3-206ENST00000428313 LIN7AO14910 233 aaPredicted RBP17.97■□□□□ 0.47
C9orf3-206ENST00000428313 SSBP05455 408 aaKnown RBP eCLIP17.97■□□□□ 0.47
C9orf3-206ENST00000428313 RPSAP08865 295 aaKnown RBP17.97■□□□□ 0.47
C9orf3-206ENST00000428313 HSPD1P10809 573 aaKnown RBP17.97■□□□□ 0.47
C9orf3-206ENST00000428313 SEC24CP53992 1094 aa17.97■□□□□ 0.47
C9orf3-206ENST00000428313 PDCD2Q16342 344 aaPredicted RBP17.97■□□□□ 0.47
C9orf3-206ENST00000428313 KCTD16Q68DU8 428 aa17.97■□□□□ 0.47
C9orf3-206ENST00000428313 ARMC9Q7Z3E5 817 aa17.97■□□□□ 0.47
C9orf3-206ENST00000428313 ARFGAP2Q8N6H7 521 aa17.97■□□□□ 0.47
C9orf3-206ENST00000428313 ZNF579Q8NAF0 562 aaKnown RBP17.97■□□□□ 0.47
C9orf3-206ENST00000428313 CCHCR1Q8TD31 782 aa17.97■□□□□ 0.47
C9orf3-206ENST00000428313 ALG1Q9BT22 464 aa17.97■□□□□ 0.47
C9orf3-206ENST00000428313 ECM29Q5VYK3 1845 aa17.97■□□□□ 0.47
C9orf3-206ENST00000428313 ACEP12821 1306 aa17.97■□□□□ 0.47
C9orf3-206ENST00000428313 POLR2DO15514 142 aaKnown RBP17.97■□□□□ 0.47
C9orf3-206ENST00000428313 ACTN4O43707 911 aaKnown RBP17.97■□□□□ 0.47
C9orf3-206ENST00000428313 IPO7O95373 1038 aaKnown RBP17.97■□□□□ 0.47
C9orf3-206ENST00000428313 ATP6V1G2O95670 118 aa17.97■□□□□ 0.47
C9orf3-206ENST00000428313 CHGBP05060 677 aa17.97■□□□□ 0.47
C9orf3-206ENST00000428313 SPAG1Q07617 926 aa17.97■□□□□ 0.47
C9orf3-206ENST00000428313 TNNI3KQ59H18 835 aa17.97■□□□□ 0.47
C9orf3-206ENST00000428313 CFAP58Q5T655 872 aa17.97■□□□□ 0.47
C9orf3-206ENST00000428313 KIRREL3Q8IZU9 778 aa17.97■□□□□ 0.47
C9orf3-206ENST00000428313 CUL5Q93034 780 aa17.97■□□□□ 0.47
C9orf3-206ENST00000428313 ATP6V1G3Q96LB4 118 aa17.97■□□□□ 0.47
C9orf3-206ENST00000428313 LRRC1Q9BTT6 524 aa17.97■□□□□ 0.47
C9orf3-206ENST00000428313 IQSEC3Q9UPP2 1182 aaPredicted RBP17.97■□□□□ 0.47
C9orf3-206ENST00000428313 TRPC6Q9Y210 931 aa17.97■□□□□ 0.47
C9orf3-206ENST00000428313 RIPOR2Q9Y4F9 1068 aa17.97■□□□□ 0.47
C9orf3-206ENST00000428313 FPGT-TNNI3KV9GXZ4 949 aa17.97■□□□□ 0.47
C9orf3-206ENST00000428313 WDR19Q8NEZ3 1342 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms