RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 EPB41L4AQ9HCS5 686 aaPredicted RBP10.89□□□□□ -0.67
SMC1A-203ENST00000428014 HTTP42858 3142 aa10.89□□□□□ -0.67
SMC1A-203ENST00000428014 IGKV6D-41A0A0C4DH26 115 aa10.88□□□□□ -0.67
SMC1A-203ENST00000428014 M0R2C6 588 aa10.88□□□□□ -0.67
SMC1A-203ENST00000428014 SLURP2P0DP57 97 aa10.88□□□□□ -0.67
SMC1A-203ENST00000428014 VCAM1P19320 739 aa10.88□□□□□ -0.67
SMC1A-203ENST00000428014 RASA1P20936 1047 aa10.88□□□□□ -0.67
SMC1A-203ENST00000428014 MAPK4P31152 587 aa10.88□□□□□ -0.67
SMC1A-203ENST00000428014 COPB2P35606 906 aa10.88□□□□□ -0.67
SMC1A-203ENST00000428014 PSMC4P43686 418 aa10.88□□□□□ -0.67
SMC1A-203ENST00000428014 HERVK_113P62684 666 aa10.88□□□□□ -0.67
SMC1A-203ENST00000428014 CCNA1P78396 465 aa10.88□□□□□ -0.67
SMC1A-203ENST00000428014 ICA1Q05084 483 aa10.88□□□□□ -0.67
SMC1A-203ENST00000428014 SEPT2Q15019 361 aa10.88□□□□□ -0.67
SMC1A-203ENST00000428014 TREML2Q5T2D2 321 aa10.88□□□□□ -0.67
SMC1A-203ENST00000428014 RCSD1Q6JBY9 416 aa10.88□□□□□ -0.67
SMC1A-203ENST00000428014 SLAIN1Q8ND83 568 aa10.88□□□□□ -0.67
SMC1A-203ENST00000428014 NEDD1Q8NHV4 660 aa10.88□□□□□ -0.67
SMC1A-203ENST00000428014 SOCS4Q8WXH5 440 aa10.88□□□□□ -0.67
SMC1A-203ENST00000428014 FEZ1Q99689 392 aa10.88□□□□□ -0.67
SMC1A-203ENST00000428014 DSCC1Q9BVC3 393 aa10.88□□□□□ -0.67
SMC1A-203ENST00000428014 ADAMTS5Q9UNA0 930 aa10.88□□□□□ -0.67
SMC1A-203ENST00000428014 CCDC171Q6TFL3 1326 aa10.87□□□□□ -0.67
SMC1A-203ENST00000428014 MGAMO43451 1857 aa10.87□□□□□ -0.67
SMC1A-203ENST00000428014 FOXP2O15409 715 aa10.87□□□□□ -0.67
SMC1A-203ENST00000428014 PLA2G6O60733 806 aa10.87□□□□□ -0.67
SMC1A-203ENST00000428014 CYP2C8P10632 490 aa10.87□□□□□ -0.67
SMC1A-203ENST00000428014 SDSP20132 328 aa10.87□□□□□ -0.67
SMC1A-203ENST00000428014 PPARAQ07869 468 aa10.87□□□□□ -0.67
SMC1A-203ENST00000428014 COG2Q14746 738 aa10.87□□□□□ -0.67
SMC1A-203ENST00000428014 RAB3GAP1Q15042 981 aa10.87□□□□□ -0.67
SMC1A-203ENST00000428014 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.87□□□□□ -0.67
SMC1A-203ENST00000428014 CENPQQ7L2Z9 268 aaPredicted RBP10.87□□□□□ -0.67
SMC1A-203ENST00000428014 SIAH1Q8IUQ4 282 aa10.87□□□□□ -0.67
SMC1A-203ENST00000428014 ZNF444Q8N0Y2 327 aaPredicted RBP10.87□□□□□ -0.67
SMC1A-203ENST00000428014 SHCBP1Q8NEM2 672 aa10.87□□□□□ -0.67
SMC1A-203ENST00000428014 GPRC5AQ8NFJ5 357 aa10.87□□□□□ -0.67
SMC1A-203ENST00000428014 COA7Q96BR5 231 aa10.87□□□□□ -0.67
SMC1A-203ENST00000428014 ZNF333Q96JL9 665 aa10.87□□□□□ -0.67
SMC1A-203ENST00000428014 TRIM47Q96LD4 638 aa10.87□□□□□ -0.67
SMC1A-203ENST00000428014 MKNK2Q9HBH9 465 aa10.87□□□□□ -0.67
SMC1A-203ENST00000428014 GOPCQ9HD26 462 aa10.87□□□□□ -0.67
SMC1A-203ENST00000428014 TCP11L1Q9NUJ3 509 aa10.87□□□□□ -0.67
SMC1A-203ENST00000428014 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.87□□□□□ -0.67
SMC1A-203ENST00000428014 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.86□□□□□ -0.67
SMC1A-203ENST00000428014 A0A1W2PRG0 241 aa10.86□□□□□ -0.67
SMC1A-203ENST00000428014 ATP2A1O14983 1001 aa10.86□□□□□ -0.67
SMC1A-203ENST00000428014 STRNO43815 780 aa10.86□□□□□ -0.67
SMC1A-203ENST00000428014 APPP05067 770 aa10.86□□□□□ -0.67
SMC1A-203ENST00000428014 CYP2D6P10635 497 aa10.86□□□□□ -0.67
SMC1A-203ENST00000428014 HSPD1P10809 573 aaKnown RBP10.86□□□□□ -0.67
SMC1A-203ENST00000428014 AKR1B1P15121 316 aa10.86□□□□□ -0.67
SMC1A-203ENST00000428014 SLFNL1Q499Z3 407 aa10.86□□□□□ -0.67
SMC1A-203ENST00000428014 CCDC178Q5BJE1 867 aa10.86□□□□□ -0.67
SMC1A-203ENST00000428014 TTC22Q5TAA0 569 aa10.86□□□□□ -0.67
SMC1A-203ENST00000428014 ABRAQ8N0Z2 381 aa10.86□□□□□ -0.67
SMC1A-203ENST00000428014 GMCL1P1Q8NEA9 526 aa10.86□□□□□ -0.67
SMC1A-203ENST00000428014 NKX2-3Q8TAU0 364 aa10.86□□□□□ -0.67
SMC1A-203ENST00000428014 RUFY2Q8WXA3 655 aa10.86□□□□□ -0.67
SMC1A-203ENST00000428014 MS4A3Q96HJ5 214 aa10.86□□□□□ -0.67
SMC1A-203ENST00000428014 ZFP91Q96JP5 570 aaPredicted RBP10.86□□□□□ -0.67
SMC1A-203ENST00000428014 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.86□□□□□ -0.67
SMC1A-203ENST00000428014 MAF1Q9H063 256 aa10.86□□□□□ -0.67
SMC1A-203ENST00000428014 RNF41Q9H4P4 317 aaPredicted RBP10.86□□□□□ -0.67
SMC1A-203ENST00000428014 RBPJLQ9UBG7 517 aa10.86□□□□□ -0.67
SMC1A-203ENST00000428014 CPA4Q9UI42 421 aa10.86□□□□□ -0.67
SMC1A-203ENST00000428014 CTNNA3Q9UI47 895 aa10.86□□□□□ -0.67
SMC1A-203ENST00000428014 A0A0G2JMZ2 1700 aa10.85□□□□□ -0.67
SMC1A-203ENST00000428014 TRIM6-TRIM34B2RNG4 842 aa10.85□□□□□ -0.67
SMC1A-203ENST00000428014 TTLL1O95922 423 aa10.85□□□□□ -0.67
SMC1A-203ENST00000428014 FGAP02671 866 aa10.85□□□□□ -0.67
SMC1A-203ENST00000428014 CHGBP05060 677 aa10.85□□□□□ -0.67
SMC1A-203ENST00000428014 HOXC6P09630 235 aa10.85□□□□□ -0.67
SMC1A-203ENST00000428014 ERVK-9P63128 1117 aa10.85□□□□□ -0.67
SMC1A-203ENST00000428014 ERVK-24P63145 666 aa10.85□□□□□ -0.67
SMC1A-203ENST00000428014 B4GALNT3Q6L9W6 998 aa10.85□□□□□ -0.67
SMC1A-203ENST00000428014 ANKRD13CQ8N6S4 541 aa10.85□□□□□ -0.67
SMC1A-203ENST00000428014 SLC44A5Q8NCS7 719 aa10.85□□□□□ -0.67
SMC1A-203ENST00000428014 ACER1Q8TDN7 264 aa10.85□□□□□ -0.67
SMC1A-203ENST00000428014 STAG1Q8WVM7 1258 aa10.85□□□□□ -0.67
SMC1A-203ENST00000428014 DYNLL2Q96FJ2 89 aa10.85□□□□□ -0.67
SMC1A-203ENST00000428014 TTC14Q96N46 770 aa10.85□□□□□ -0.67
SMC1A-203ENST00000428014 SEC62Q99442 399 aaKnown RBP10.85□□□□□ -0.67
SMC1A-203ENST00000428014 P2RX7Q99572 595 aaKnown RBP10.85□□□□□ -0.67
SMC1A-203ENST00000428014 MTMR4Q9NYA4 1195 aa10.85□□□□□ -0.67
SMC1A-203ENST00000428014 PNMA2Q9UL42 364 aa10.85□□□□□ -0.67
SMC1A-203ENST00000428014 ZNF236Q9UL36 1845 aa10.85□□□□□ -0.67
SMC1A-203ENST00000428014 RLFQ13129 1914 aa10.85□□□□□ -0.67
SMC1A-203ENST00000428014 A0A0D9SFI3 127 aa10.84□□□□□ -0.67
SMC1A-203ENST00000428014 SPDYE16A6NNV3 312 aaPredicted RBP10.84□□□□□ -0.67
SMC1A-203ENST00000428014 MPHOSPH10O00566 681 aaKnown RBP10.84□□□□□ -0.67
SMC1A-203ENST00000428014 TNPO2O14787 897 aaKnown RBP10.84□□□□□ -0.67
SMC1A-203ENST00000428014 FMNL1O95466 1100 aaPredicted RBP10.84□□□□□ -0.67
SMC1A-203ENST00000428014 EEF2P13639 858 aaKnown RBP10.84□□□□□ -0.67
SMC1A-203ENST00000428014 GRK4P32298 578 aa10.84□□□□□ -0.67
SMC1A-203ENST00000428014 OAZ1P54368 228 aa10.84□□□□□ -0.67
SMC1A-203ENST00000428014 PDAP1Q13442 181 aaKnown RBP10.84□□□□□ -0.67
SMC1A-203ENST00000428014 SLC9C1Q4G0N8 1177 aa10.84□□□□□ -0.67
SMC1A-203ENST00000428014 CCDC84Q86UT8 332 aaPredicted RBP10.84□□□□□ -0.67
SMC1A-203ENST00000428014 HS6ST3Q8IZP7 471 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms