RNA–Protein interactions for RNA: ENST00000427645.5

SMARCAL1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-206ENST00000427645 OTUD7BQ6GQQ9 843 aa9.68□□□□□ -0.86
SMARCAL1-206ENST00000427645 SYNE3Q6ZMZ3 975 aa9.68□□□□□ -0.86
SMARCAL1-206ENST00000427645 METTL16Q86W50 562 aaKnown RBP9.68□□□□□ -0.86
SMARCAL1-206ENST00000427645 CRACR2BQ8N4Y2 399 aaPredicted RBP9.68□□□□□ -0.86
SMARCAL1-206ENST00000427645 IGDCC4Q8TDY8 1250 aa9.68□□□□□ -0.86
SMARCAL1-206ENST00000427645 ZKSCAN4Q969J2 545 aaPredicted RBP9.68□□□□□ -0.86
SMARCAL1-206ENST00000427645 HOOK2Q96ED9 719 aa9.68□□□□□ -0.86
SMARCAL1-206ENST00000427645 CCDC17Q96LX7 622 aa9.68□□□□□ -0.86
SMARCAL1-206ENST00000427645 TRIM34Q9BYJ4 488 aa9.68□□□□□ -0.86
SMARCAL1-206ENST00000427645 ARHGAP39Q9C0H5 1083 aa9.68□□□□□ -0.86
SMARCAL1-206ENST00000427645 CWC22Q9HCG8 908 aaKnown RBP9.68□□□□□ -0.86
SMARCAL1-206ENST00000427645 DDX4Q9NQI0 724 aaKnown RBP9.68□□□□□ -0.86
SMARCAL1-206ENST00000427645 TCP11L1Q9NUJ3 509 aa9.68□□□□□ -0.86
SMARCAL1-206ENST00000427645 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.68□□□□□ -0.86
SMARCAL1-206ENST00000427645 PTCH2Q9Y6C5 1203 aa9.68□□□□□ -0.86
SMARCAL1-206ENST00000427645 UNCXA6NJT0 531 aa9.67□□□□□ -0.86
SMARCAL1-206ENST00000427645 DHX16O60231 1041 aaKnown RBP9.67□□□□□ -0.86
SMARCAL1-206ENST00000427645 TBC1D12O60347 775 aa9.67□□□□□ -0.86
SMARCAL1-206ENST00000427645 TSPY3P0CV98 308 aa9.67□□□□□ -0.86
SMARCAL1-206ENST00000427645 TSPY8P0CW00 308 aa9.67□□□□□ -0.86
SMARCAL1-206ENST00000427645 CYP2D6P10635 497 aa9.67□□□□□ -0.86
SMARCAL1-206ENST00000427645 PDIA4P13667 645 aaKnown RBP9.67□□□□□ -0.86
SMARCAL1-206ENST00000427645 TFAP4Q01664 338 aa9.67□□□□□ -0.86
SMARCAL1-206ENST00000427645 GABPAQ06546 454 aa9.67□□□□□ -0.86
SMARCAL1-206ENST00000427645 CUL4AQ13619 759 aa9.67□□□□□ -0.86
SMARCAL1-206ENST00000427645 WTAPQ15007 396 aa9.67□□□□□ -0.86
SMARCAL1-206ENST00000427645 TAF1CQ15572 869 aaPredicted RBP9.67□□□□□ -0.86
SMARCAL1-206ENST00000427645 TMEM67Q5HYA8 995 aa9.67□□□□□ -0.86
SMARCAL1-206ENST00000427645 HABP4Q5JVS0 413 aaKnown RBP9.67□□□□□ -0.86
SMARCAL1-206ENST00000427645 CYB5R4Q7L1T6 521 aa9.67□□□□□ -0.86
SMARCAL1-206ENST00000427645 MIGA2Q7L4E1 593 aa9.67□□□□□ -0.86
SMARCAL1-206ENST00000427645 CHST3Q7LGC8 479 aa9.67□□□□□ -0.86
SMARCAL1-206ENST00000427645 SGMS1Q86VZ5 419 aa9.67□□□□□ -0.86
SMARCAL1-206ENST00000427645 DGKHQ86XP1 1220 aa9.67□□□□□ -0.86
SMARCAL1-206ENST00000427645 STK11IPQ8N1F8 1099 aa9.67□□□□□ -0.86
SMARCAL1-206ENST00000427645 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.67□□□□□ -0.86
SMARCAL1-206ENST00000427645 BRF1Q92994 677 aa9.67□□□□□ -0.86
SMARCAL1-206ENST00000427645 ZSCAN10Q96SZ4 725 aaPredicted RBP9.67□□□□□ -0.86
SMARCAL1-206ENST00000427645 INCENPQ9NQS7 918 aa9.67□□□□□ -0.86
SMARCAL1-206ENST00000427645 HERC5Q9UII4 1024 aaKnown RBP9.67□□□□□ -0.86
SMARCAL1-206ENST00000427645 CCDC69A6NI79 296 aa9.66□□□□□ -0.86
SMARCAL1-206ENST00000427645 PRDM1O75626 825 aa9.66□□□□□ -0.86
SMARCAL1-206ENST00000427645 CALM1P0DP23 149 aa9.66□□□□□ -0.86
SMARCAL1-206ENST00000427645 CALM2P0DP24 149 aa9.66□□□□□ -0.86
SMARCAL1-206ENST00000427645 CALM3P0DP25 149 aa9.66□□□□□ -0.86
SMARCAL1-206ENST00000427645 GTF2A2P52657 109 aa9.66□□□□□ -0.86
SMARCAL1-206ENST00000427645 RCAN1P53805 252 aa9.66□□□□□ -0.86
SMARCAL1-206ENST00000427645 ANTXR2P58335 489 aa9.66□□□□□ -0.86
SMARCAL1-206ENST00000427645 NFXL1Q6ZNB6 911 aa9.66□□□□□ -0.86
SMARCAL1-206ENST00000427645 ZFPM1Q8IX07 1006 aa9.66□□□□□ -0.86
SMARCAL1-206ENST00000427645 NEDD1Q8NHV4 660 aa9.66□□□□□ -0.86
SMARCAL1-206ENST00000427645 SH3TC2Q8TF17 1288 aa9.66□□□□□ -0.86
SMARCAL1-206ENST00000427645 ANKS1AQ92625 1134 aa9.66□□□□□ -0.86
SMARCAL1-206ENST00000427645 ARMC5Q96C12 935 aa9.66□□□□□ -0.86
SMARCAL1-206ENST00000427645 DYNLL2Q96FJ2 89 aa9.66□□□□□ -0.86
SMARCAL1-206ENST00000427645 TCEANC2Q96MN5 208 aa9.66□□□□□ -0.86
SMARCAL1-206ENST00000427645 WRNIP1Q96S55 665 aa9.66□□□□□ -0.86
SMARCAL1-206ENST00000427645 SLKQ9H2G2 1235 aaPredicted RBP9.66□□□□□ -0.86
SMARCAL1-206ENST00000427645 ZFYVE28Q9HCC9 887 aa9.66□□□□□ -0.86
SMARCAL1-206ENST00000427645 TPCN1Q9ULQ1 816 aa9.66□□□□□ -0.86
SMARCAL1-206ENST00000427645 CSADQ9Y600 493 aa9.66□□□□□ -0.86
SMARCAL1-206ENST00000427645 DDX60LQ5H9U9 1706 aaKnown RBP9.65□□□□□ -0.86
SMARCAL1-206ENST00000427645 CCDC196A0A1B0GTZ2 297 aa9.65□□□□□ -0.86
SMARCAL1-206ENST00000427645 DDTLA6NHG4 134 aaPredicted RBP9.65□□□□□ -0.86
SMARCAL1-206ENST00000427645 BTBD19C9JJ37 291 aa9.65□□□□□ -0.86
SMARCAL1-206ENST00000427645 SH2B2O14492 632 aaPredicted RBP9.65□□□□□ -0.86
SMARCAL1-206ENST00000427645 IRF6O14896 467 aa9.65□□□□□ -0.86
SMARCAL1-206ENST00000427645 PFKFB2O60825 505 aa9.65□□□□□ -0.86
SMARCAL1-206ENST00000427645 RASA1P20936 1047 aa9.65□□□□□ -0.86
SMARCAL1-206ENST00000427645 PDIA3P30101 505 aaKnown RBP9.65□□□□□ -0.86
SMARCAL1-206ENST00000427645 SLC4A3P48751 1232 aa9.65□□□□□ -0.86
SMARCAL1-206ENST00000427645 MAP3K10Q02779 954 aa9.65□□□□□ -0.86
SMARCAL1-206ENST00000427645 ME3Q16798 604 aa9.65□□□□□ -0.86
SMARCAL1-206ENST00000427645 SLC4A8Q2Y0W8 1093 aa9.65□□□□□ -0.86
SMARCAL1-206ENST00000427645 CERKLQ49MI3 558 aaPredicted RBP9.65□□□□□ -0.86
SMARCAL1-206ENST00000427645 SLC9C1Q4G0N8 1177 aa9.65□□□□□ -0.86
SMARCAL1-206ENST00000427645 IFIT1BQ5T764 474 aaKnown RBP9.65□□□□□ -0.86
SMARCAL1-206ENST00000427645 TATDN1Q6P1N9 297 aa9.65□□□□□ -0.86
SMARCAL1-206ENST00000427645 NOL8Q76FK4 1167 aaKnown RBP9.65□□□□□ -0.86
SMARCAL1-206ENST00000427645 ZNF333Q96JL9 665 aa9.65□□□□□ -0.86
SMARCAL1-206ENST00000427645 LLPHQ9BRT6 129 aaKnown RBP9.65□□□□□ -0.86
SMARCAL1-206ENST00000427645 TMEM106CQ9BVX2 250 aa9.65□□□□□ -0.86
SMARCAL1-206ENST00000427645 LRRC2Q9BYS8 371 aa9.65□□□□□ -0.86
SMARCAL1-206ENST00000427645 LY9Q9HBG7 655 aa9.65□□□□□ -0.86
SMARCAL1-206ENST00000427645 SLC12A7Q9Y666 1083 aa9.65□□□□□ -0.86
SMARCAL1-206ENST00000427645 TACC3Q9Y6A5 838 aa9.65□□□□□ -0.86
SMARCAL1-206ENST00000427645 SNCAIPQ9Y6H5 919 aa9.65□□□□□ -0.86
SMARCAL1-206ENST00000427645 TNKSO95271 1327 aa9.64□□□□□ -0.87
SMARCAL1-206ENST00000427645 KLF18A0A0U1RQI7 1052 aa9.64□□□□□ -0.87
SMARCAL1-206ENST00000427645 SPDYE5A6NIY4 337 aa9.64□□□□□ -0.87
SMARCAL1-206ENST00000427645 SMIM22K7EJ46 135 aa9.64□□□□□ -0.87
SMARCAL1-206ENST00000427645 ZBTB43O43298 467 aa9.64□□□□□ -0.87
SMARCAL1-206ENST00000427645 CTGFP29279 349 aa9.64□□□□□ -0.87
SMARCAL1-206ENST00000427645 INPP5BP32019 993 aa9.64□□□□□ -0.87
SMARCAL1-206ENST00000427645 SHMT1P34896 483 aa9.64□□□□□ -0.87
SMARCAL1-206ENST00000427645 APOBRQ0VD83 1088 aa9.64□□□□□ -0.87
SMARCAL1-206ENST00000427645 SEC23AQ15436 765 aa9.64□□□□□ -0.87
SMARCAL1-206ENST00000427645 FAM47AQ5JRC9 791 aa9.64□□□□□ -0.87
SMARCAL1-206ENST00000427645 CPLX2Q6PUV4 134 aaKnown RBP9.64□□□□□ -0.87
SMARCAL1-206ENST00000427645 CHRDL2Q6WN34 429 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms