RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 LAMC3Q9Y6N6 1575 aa6.33□□□□□ -1.4
HERC4-206ENST00000427635 KIF28PB7ZC32 967 aa6.33□□□□□ -1.4
HERC4-206ENST00000427635 BCRP11274 1271 aa6.33□□□□□ -1.4
HERC4-206ENST00000427635 GTF2IP78347 998 aa6.33□□□□□ -1.4
HERC4-206ENST00000427635 MFSD14CQ5VZR4 134 aa6.33□□□□□ -1.4
HERC4-206ENST00000427635 ZNF467Q7Z7K2 595 aaPredicted RBP6.33□□□□□ -1.4
HERC4-206ENST00000427635 CCDC26Q8TAB7 109 aa6.33□□□□□ -1.4
HERC4-206ENST00000427635 TRIM63Q969Q1 353 aa6.33□□□□□ -1.4
HERC4-206ENST00000427635 HVCN1Q96D96 273 aa6.33□□□□□ -1.4
HERC4-206ENST00000427635 AATFQ9NY61 560 aaKnown RBP eCLIP6.33□□□□□ -1.4
HERC4-206ENST00000427635 USTQ9Y2C2 406 aa6.33□□□□□ -1.4
HERC4-206ENST00000427635 TRAF5O00463 557 aa6.33□□□□□ -1.4
HERC4-206ENST00000427635 MAN1A1P33908 653 aa6.33□□□□□ -1.4
HERC4-206ENST00000427635 HSPA4P34932 840 aa6.33□□□□□ -1.4
HERC4-206ENST00000427635 POLGP54098 1239 aaPredicted RBP6.33□□□□□ -1.4
HERC4-206ENST00000427635 UBXN2AP68543 259 aa6.33□□□□□ -1.4
HERC4-206ENST00000427635 ARL10Q8N8L6 244 aa6.33□□□□□ -1.4
HERC4-206ENST00000427635 SNX25Q9H3E2 840 aa6.33□□□□□ -1.4
HERC4-206ENST00000427635 GAS7O60861 476 aa6.33□□□□□ -1.4
HERC4-206ENST00000427635 PPFIA4O75335 1185 aa6.33□□□□□ -1.4
HERC4-206ENST00000427635 FLOT1O75955 427 aa6.33□□□□□ -1.4
HERC4-206ENST00000427635 LMNB1P20700 586 aa6.33□□□□□ -1.4
HERC4-206ENST00000427635 TSPY1Q01534 308 aa6.33□□□□□ -1.4
HERC4-206ENST00000427635 PUS10Q3MIT2 529 aaKnown RBP6.33□□□□□ -1.4
HERC4-206ENST00000427635 MIS18BP1Q6P0N0 1132 aa6.33□□□□□ -1.4
HERC4-206ENST00000427635 FLCNQ8NFG4 579 aa6.33□□□□□ -1.4
HERC4-206ENST00000427635 IFT81Q8WYA0 676 aa6.33□□□□□ -1.4
HERC4-206ENST00000427635 FAM210AQ96ND0 272 aa6.33□□□□□ -1.4
HERC4-206ENST00000427635 MAP3K5Q99683 1374 aa6.33□□□□□ -1.4
HERC4-206ENST00000427635 CETN3O15182 167 aa6.32□□□□□ -1.4
HERC4-206ENST00000427635 KRT86O43790 486 aa6.32□□□□□ -1.4
HERC4-206ENST00000427635 TRIM37O94972 964 aa6.32□□□□□ -1.4
HERC4-206ENST00000427635 GCNT3O95395 438 aa6.32□□□□□ -1.4
HERC4-206ENST00000427635 GTF2A1P52655 376 aaPredicted RBP6.32□□□□□ -1.4
HERC4-206ENST00000427635 Q3C1V9 767 aa6.32□□□□□ -1.4
HERC4-206ENST00000427635 MROH5Q6ZUA9 1318 aa6.32□□□□□ -1.4
HERC4-206ENST00000427635 ZNF365Q70YC5 407 aa6.32□□□□□ -1.4
HERC4-206ENST00000427635 MICALL1Q8N3F8 863 aa6.32□□□□□ -1.4
HERC4-206ENST00000427635 CCDC42Q96M95 316 aa6.32□□□□□ -1.4
HERC4-206ENST00000427635 PLIN2Q99541 437 aa6.32□□□□□ -1.4
HERC4-206ENST00000427635 CXorf56Q9H5V9 222 aa6.32□□□□□ -1.4
HERC4-206ENST00000427635 CAPN10Q9HC96 672 aa6.32□□□□□ -1.4
HERC4-206ENST00000427635 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.32□□□□□ -1.4
HERC4-206ENST00000427635 PTGS1P23219 599 aa6.32□□□□□ -1.4
HERC4-206ENST00000427635 CCND2P30279 289 aa6.32□□□□□ -1.4
HERC4-206ENST00000427635 TNNC1P63316 161 aa6.32□□□□□ -1.4
HERC4-206ENST00000427635 CCDC93Q567U6 631 aa6.32□□□□□ -1.4
HERC4-206ENST00000427635 ADALQ6DHV7 355 aa6.32□□□□□ -1.4
HERC4-206ENST00000427635 SKAP1Q86WV1 359 aa6.32□□□□□ -1.4
HERC4-206ENST00000427635 TGFBRAP1Q8WUH2 860 aa6.32□□□□□ -1.4
HERC4-206ENST00000427635 ATP2A3Q93084 1043 aa6.32□□□□□ -1.4
HERC4-206ENST00000427635 NUF2Q9BZD4 464 aa6.32□□□□□ -1.4
HERC4-206ENST00000427635 IPO5O00410 1097 aaKnown RBP6.32□□□□□ -1.4
HERC4-206ENST00000427635 RNMTO43148 476 aaKnown RBP6.32□□□□□ -1.4
HERC4-206ENST00000427635 ZMYND10O75800 440 aa6.32□□□□□ -1.4
HERC4-206ENST00000427635 ANXA1P04083 346 aa6.32□□□□□ -1.4
HERC4-206ENST00000427635 HCLS1P14317 486 aaPredicted RBP6.32□□□□□ -1.4
HERC4-206ENST00000427635 MRPL44Q9H9J2 332 aaKnown RBP6.32□□□□□ -1.4
HERC4-206ENST00000427635 OLA1Q9NTK5 396 aaKnown RBP6.32□□□□□ -1.4
HERC4-206ENST00000427635 KDM2BQ8NHM5 1336 aa6.32□□□□□ -1.4
HERC4-206ENST00000427635 IVLP07476 585 aa6.32□□□□□ -1.4
HERC4-206ENST00000427635 ZNF853P0CG23 659 aa6.32□□□□□ -1.4
HERC4-206ENST00000427635 CIITAP33076 1130 aa6.32□□□□□ -1.4
HERC4-206ENST00000427635 RSRC2Q7L4I2 434 aaKnown RBP6.32□□□□□ -1.4
HERC4-206ENST00000427635 KRT25Q7Z3Z0 450 aa6.32□□□□□ -1.4
HERC4-206ENST00000427635 RHPN1Q8TCX5 695 aa6.32□□□□□ -1.4
HERC4-206ENST00000427635 RAET1EQ8TD07 263 aa6.32□□□□□ -1.4
HERC4-206ENST00000427635 IRX5P78411 483 aaPredicted RBP6.32□□□□□ -1.4
HERC4-206ENST00000427635 POU5F1Q01860 360 aaKnown RBP6.32□□□□□ -1.4
HERC4-206ENST00000427635 CALCRLQ16602 461 aa6.32□□□□□ -1.4
HERC4-206ENST00000427635 DOK7Q18PE1 504 aa6.32□□□□□ -1.4
HERC4-206ENST00000427635 KRT26Q7Z3Y9 468 aa6.32□□□□□ -1.4
HERC4-206ENST00000427635 MAIP1Q8WWC4 291 aa6.32□□□□□ -1.4
HERC4-206ENST00000427635 NKIRAS1Q9NYS0 192 aa6.32□□□□□ -1.4
HERC4-206ENST00000427635 SMIM23A6NLE4 172 aa6.31□□□□□ -1.4
HERC4-206ENST00000427635 KCNJ6P48051 423 aa6.31□□□□□ -1.4
HERC4-206ENST00000427635 SNW1Q13573 536 aaKnown RBP6.31□□□□□ -1.4
HERC4-206ENST00000427635 POLA2Q14181 598 aa6.31□□□□□ -1.4
HERC4-206ENST00000427635 HADHQ16836 314 aaKnown RBP6.31□□□□□ -1.4
HERC4-206ENST00000427635 CERKLQ49MI3 558 aaPredicted RBP6.31□□□□□ -1.4
HERC4-206ENST00000427635 TMTC4Q5T4D3 741 aa6.31□□□□□ -1.4
HERC4-206ENST00000427635 SCYL2Q6P3W7 929 aa6.31□□□□□ -1.4
HERC4-206ENST00000427635 BRF1Q92994 677 aa6.31□□□□□ -1.4
HERC4-206ENST00000427635 ANKRD36BP1Q96IX9 119 aa6.31□□□□□ -1.4
HERC4-206ENST00000427635 TEKT3Q9BXF9 490 aa6.31□□□□□ -1.4
HERC4-206ENST00000427635 ST7Q9NRC1 585 aa6.31□□□□□ -1.4
HERC4-206ENST00000427635 BSDC1Q9NW68 430 aaPredicted RBP6.31□□□□□ -1.4
HERC4-206ENST00000427635 FANCIQ9NVI1 1328 aa6.31□□□□□ -1.4
HERC4-206ENST00000427635 KDM3AQ9Y4C1 1321 aa6.31□□□□□ -1.4
HERC4-206ENST00000427635 GCP02774 474 aa6.31□□□□□ -1.4
HERC4-206ENST00000427635 PRKCQQ04759 706 aa6.31□□□□□ -1.4
HERC4-206ENST00000427635 SH2D4BQ5SQS7 431 aa6.31□□□□□ -1.4
HERC4-206ENST00000427635 RAB44Q7Z6P3 723 aaPredicted RBP6.31□□□□□ -1.4
HERC4-206ENST00000427635 IQUBQ8NA54 791 aa6.31□□□□□ -1.4
HERC4-206ENST00000427635 PLBD2Q8NHP8 589 aa6.31□□□□□ -1.4
HERC4-206ENST00000427635 HELLSQ9NRZ9 838 aa6.31□□□□□ -1.4
HERC4-206ENST00000427635 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.31□□□□□ -1.4
HERC4-206ENST00000427635 TFIP11Q9UBB9 837 aaKnown RBP6.31□□□□□ -1.4
HERC4-206ENST00000427635 RABGAP1Q9Y3P9 1069 aa6.31□□□□□ -1.4
HERC4-206ENST00000427635 GTPBP6O43824 516 aaPredicted RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms