RNA–Protein interactions for RNA: ENST00000426678.1

NCKIPSD-205, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 5

Gene NCKIPSD, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-205ENST00000426678 ERVK-24P63145 666 aa17.31■□□□□ 0.36
NCKIPSD-205ENST00000426678 SIAH1Q8IUQ4 282 aa17.31■□□□□ 0.36
NCKIPSD-205ENST00000426678 SLAIN1Q8ND83 568 aa17.31■□□□□ 0.36
NCKIPSD-205ENST00000426678 GOPCQ9HD26 462 aa17.31■□□□□ 0.36
NCKIPSD-205ENST00000426678 DIAPH3Q9NSV4 1193 aa17.31■□□□□ 0.36
NCKIPSD-205ENST00000426678 RBPJLQ9UBG7 517 aa17.31■□□□□ 0.36
NCKIPSD-205ENST00000426678 BIN2Q9UBW5 565 aaPredicted RBP17.31■□□□□ 0.36
NCKIPSD-205ENST00000426678 RABGAP1Q9Y3P9 1069 aa17.31■□□□□ 0.36
NCKIPSD-205ENST00000426678 CCDC171Q6TFL3 1326 aa17.3■□□□□ 0.36
NCKIPSD-205ENST00000426678 HIP1O00291 1037 aa17.3■□□□□ 0.36
NCKIPSD-205ENST00000426678 WDR46O15213 610 aaKnown RBP17.3■□□□□ 0.36
NCKIPSD-205ENST00000426678 FOXP2O15409 715 aa17.3■□□□□ 0.36
NCKIPSD-205ENST00000426678 RAD21O60216 631 aa17.3■□□□□ 0.36
NCKIPSD-205ENST00000426678 PEX10O60683 326 aa17.3■□□□□ 0.36
NCKIPSD-205ENST00000426678 SDSP20132 328 aa17.3■□□□□ 0.36
NCKIPSD-205ENST00000426678 MFAP1P55081 439 aaKnown RBP17.3■□□□□ 0.36
NCKIPSD-205ENST00000426678 CCNA1P78396 465 aa17.3■□□□□ 0.36
NCKIPSD-205ENST00000426678 VPS53Q5VIR6 699 aa17.3■□□□□ 0.36
NCKIPSD-205ENST00000426678 SPICE1Q8N0Z3 855 aa17.3■□□□□ 0.36
NCKIPSD-205ENST00000426678 CWC22Q9HCG8 908 aaKnown RBP17.3■□□□□ 0.36
NCKIPSD-205ENST00000426678 DOCK3Q8IZD9 2030 aa17.3■□□□□ 0.36
NCKIPSD-205ENST00000426678 SPDYE16A6NNV3 312 aaPredicted RBP17.29■□□□□ 0.36
NCKIPSD-205ENST00000426678 ADCY3O60266 1144 aa17.29■□□□□ 0.36
NCKIPSD-205ENST00000426678 TSPY3P0CV98 308 aa17.29■□□□□ 0.36
NCKIPSD-205ENST00000426678 TSPY8P0CW00 308 aa17.29■□□□□ 0.36
NCKIPSD-205ENST00000426678 PDE4AP27815 886 aa17.29■□□□□ 0.36
NCKIPSD-205ENST00000426678 MAPK4P31152 587 aa17.29■□□□□ 0.36
NCKIPSD-205ENST00000426678 UBXN2AP68543 259 aa17.29■□□□□ 0.36
NCKIPSD-205ENST00000426678 IRF5Q13568 498 aa17.29■□□□□ 0.36
NCKIPSD-205ENST00000426678 COG2Q14746 738 aa17.29■□□□□ 0.36
NCKIPSD-205ENST00000426678 LBX2Q6XYB7 198 aa17.29■□□□□ 0.36
NCKIPSD-205ENST00000426678 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.29■□□□□ 0.36
NCKIPSD-205ENST00000426678 MYH4Q9Y623 1939 aa17.28■□□□□ 0.36
NCKIPSD-205ENST00000426678 POTEFA5A3E0 1075 aa17.28■□□□□ 0.36
NCKIPSD-205ENST00000426678 FLOT1O75955 427 aa17.28■□□□□ 0.36
NCKIPSD-205ENST00000426678 ALX1Q15699 326 aa17.28■□□□□ 0.36
NCKIPSD-205ENST00000426678 KIAA1755Q5JYT7 1200 aa17.28■□□□□ 0.36
NCKIPSD-205ENST00000426678 ZNF589Q86UQ0 364 aaPredicted RBP17.28■□□□□ 0.36
NCKIPSD-205ENST00000426678 PXYLP1Q8TE99 480 aa17.28■□□□□ 0.36
NCKIPSD-205ENST00000426678 SOCS4Q8WXH5 440 aa17.28■□□□□ 0.36
NCKIPSD-205ENST00000426678 HOXC10Q9NYD6 342 aa17.28■□□□□ 0.36
NCKIPSD-205ENST00000426678 NYAP2Q9P242 653 aa17.28■□□□□ 0.36
NCKIPSD-205ENST00000426678 KIAA0100Q14667 2235 aaKnown RBP17.28■□□□□ 0.36
NCKIPSD-205ENST00000426678 PLIN4Q96Q06 1357 aa17.28■□□□□ 0.36
NCKIPSD-205ENST00000426678 CNMDO75829 334 aa17.27■□□□□ 0.36
NCKIPSD-205ENST00000426678 ELNP15502 786 aa17.27■□□□□ 0.36
NCKIPSD-205ENST00000426678 CTDSPL2Q05D32 466 aa17.27■□□□□ 0.36
NCKIPSD-205ENST00000426678 Q3C1V9 767 aa17.27■□□□□ 0.36
NCKIPSD-205ENST00000426678 TTC22Q5TAA0 569 aa17.27■□□□□ 0.36
NCKIPSD-205ENST00000426678 WDR78Q5VTH9 848 aa17.27■□□□□ 0.36
NCKIPSD-205ENST00000426678 POTEEQ6S8J3 1075 aa17.27■□□□□ 0.36
NCKIPSD-205ENST00000426678 SAMD1Q6SPF0 538 aaPredicted RBP17.27■□□□□ 0.36
NCKIPSD-205ENST00000426678 CWC27Q6UX04 472 aaKnown RBP17.27■□□□□ 0.36
NCKIPSD-205ENST00000426678 PORCNQ9H237 461 aa17.27■□□□□ 0.36
NCKIPSD-205ENST00000426678 A0A0G2JMZ2 1700 aa17.27■□□□□ 0.35
NCKIPSD-205ENST00000426678 ZMYM6O95789 1325 aa17.26■□□□□ 0.35
NCKIPSD-205ENST00000426678 IGKV6D-41A0A0C4DH26 115 aa17.26■□□□□ 0.35
NCKIPSD-205ENST00000426678 HSPD1P10809 573 aaKnown RBP17.26■□□□□ 0.35
NCKIPSD-205ENST00000426678 TFAP4Q01664 338 aa17.26■□□□□ 0.35
NCKIPSD-205ENST00000426678 GPR142Q7Z601 462 aa17.26■□□□□ 0.35
NCKIPSD-205ENST00000426678 PLEKHH3Q7Z736 793 aa17.26■□□□□ 0.35
NCKIPSD-205ENST00000426678 NEDD1Q8NHV4 660 aa17.26■□□□□ 0.35
NCKIPSD-205ENST00000426678 CEP95Q96GE4 821 aa17.26■□□□□ 0.35
NCKIPSD-205ENST00000426678 NUDT12Q9BQG2 462 aa17.26■□□□□ 0.35
NCKIPSD-205ENST00000426678 BTBD7Q9P203 1132 aa17.26■□□□□ 0.35
NCKIPSD-205ENST00000426678 CLIP2Q9UDT6 1046 aa17.26■□□□□ 0.35
NCKIPSD-205ENST00000426678 ANAPC4Q9UJX5 808 aa17.26■□□□□ 0.35
NCKIPSD-205ENST00000426678 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.26■□□□□ 0.35
NCKIPSD-205ENST00000426678 RLFQ13129 1914 aa17.25■□□□□ 0.35
NCKIPSD-205ENST00000426678 TSPY2A6NKD2 308 aa17.25■□□□□ 0.35
NCKIPSD-205ENST00000426678 TTLL1O95922 423 aa17.25■□□□□ 0.35
NCKIPSD-205ENST00000426678 FGAP02671 866 aa17.25■□□□□ 0.35
NCKIPSD-205ENST00000426678 INHAP05111 366 aa17.25■□□□□ 0.35
NCKIPSD-205ENST00000426678 DSG3P32926 999 aa17.25■□□□□ 0.35
NCKIPSD-205ENST00000426678 MTFR1Q15390 333 aa17.25■□□□□ 0.35
NCKIPSD-205ENST00000426678 FAM47AQ5JRC9 791 aa17.25■□□□□ 0.35
NCKIPSD-205ENST00000426678 PPP4R3BQ5MIZ7 849 aa17.25■□□□□ 0.35
NCKIPSD-205ENST00000426678 MB21D1Q8N884 522 aa17.25■□□□□ 0.35
NCKIPSD-205ENST00000426678 TOMM22Q9NS69 142 aa17.25■□□□□ 0.35
NCKIPSD-205ENST00000426678 MTMR4Q9NYA4 1195 aa17.25■□□□□ 0.35
NCKIPSD-205ENST00000426678 GJD2Q9UKL4 321 aa17.25■□□□□ 0.35
NCKIPSD-205ENST00000426678 IVNS1ABPQ9Y6Y0 642 aa17.25■□□□□ 0.35
NCKIPSD-205ENST00000426678 PLXNB2O15031 1838 aa17.25■□□□□ 0.35
NCKIPSD-205ENST00000426678 PARP14Q460N5 1801 aa17.25■□□□□ 0.35
NCKIPSD-205ENST00000426678 CENPFP49454 3210 aa17.25■□□□□ 0.35
NCKIPSD-205ENST00000426678 CCL5P13501 91 aa17.24■□□□□ 0.35
NCKIPSD-205ENST00000426678 GSPT1P15170 499 aaKnown RBP17.24■□□□□ 0.35
NCKIPSD-205ENST00000426678 FAM83BQ5T0W9 1011 aa17.24■□□□□ 0.35
NCKIPSD-205ENST00000426678 ATG4CQ96DT6 458 aa17.24■□□□□ 0.35
NCKIPSD-205ENST00000426678 RNF208Q9H0X6 261 aa17.24■□□□□ 0.35
NCKIPSD-205ENST00000426678 SYNPO2Q9UMS6 1093 aa17.24■□□□□ 0.35
NCKIPSD-205ENST00000426678 F5H6K3 240 aa17.23■□□□□ 0.35
NCKIPSD-205ENST00000426678 RANBP6O60518 1105 aaKnown RBP17.23■□□□□ 0.35
NCKIPSD-205ENST00000426678 HMGCRP04035 888 aa17.23■□□□□ 0.35
NCKIPSD-205ENST00000426678 EN2P19622 333 aaPredicted RBP17.23■□□□□ 0.35
NCKIPSD-205ENST00000426678 CYP2B6P20813 491 aa17.23■□□□□ 0.35
NCKIPSD-205ENST00000426678 RGS2P41220 211 aa17.23■□□□□ 0.35
NCKIPSD-205ENST00000426678 KLRC3Q07444 240 aa17.23■□□□□ 0.35
NCKIPSD-205ENST00000426678 PLS1Q14651 629 aa17.23■□□□□ 0.35
NCKIPSD-205ENST00000426678 LRRC47Q8N1G4 583 aaKnown RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms