RNA–Protein interactions for RNA: ENST00000425989.5

HDLBP-211, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-211ENST00000425989 YBX3P16989 372 aaKnown RBP eCLIP11.12□□□□□ -0.633e-12■■■■■ 38
HDLBP-211ENST00000425989 CALML3P27482 149 aa11.12□□□□□ -0.63
HDLBP-211ENST00000425989 CAP2P40123 477 aa11.12□□□□□ -0.63
HDLBP-211ENST00000425989 KRT85P78386 507 aa11.12□□□□□ -0.63
HDLBP-211ENST00000425989 EVX2Q03828 476 aa11.12□□□□□ -0.63
HDLBP-211ENST00000425989 FUT2Q10981 343 aa11.12□□□□□ -0.63
HDLBP-211ENST00000425989 PKP1Q13835 747 aa11.12□□□□□ -0.63
HDLBP-211ENST00000425989 SLC4A8Q2Y0W8 1093 aa11.12□□□□□ -0.63
HDLBP-211ENST00000425989 USP50Q70EL3 339 aaPredicted RBP11.12□□□□□ -0.63
HDLBP-211ENST00000425989 SAMD7Q7Z3H4 446 aa11.12□□□□□ -0.63
HDLBP-211ENST00000425989 CCDC12Q8WUD4 166 aaPredicted RBP11.12□□□□□ -0.63
HDLBP-211ENST00000425989 DCAF4Q8WV16 495 aa11.12□□□□□ -0.63
HDLBP-211ENST00000425989 L3MBTL3Q96JM7 780 aaPredicted RBP11.12□□□□□ -0.63
HDLBP-211ENST00000425989 DEFB129Q9H1M3 183 aa11.12□□□□□ -0.63
HDLBP-211ENST00000425989 BRMS1Q9HCU9 246 aa11.12□□□□□ -0.63
HDLBP-211ENST00000425989 HACL1Q9UJ83 578 aa11.12□□□□□ -0.63
HDLBP-211ENST00000425989 V9GY48 417 aaPredicted RBP11.12□□□□□ -0.63
HDLBP-211ENST00000425989 ZNF541Q9H0D2 1346 aa11.11□□□□□ -0.63
HDLBP-211ENST00000425989 GREB1LQ9C091 1923 aaPredicted RBP11.11□□□□□ -0.63
HDLBP-211ENST00000425989 MYH4Q9Y623 1939 aa11.11□□□□□ -0.63
HDLBP-211ENST00000425989 ADAMTSL1Q8N6G6 1762 aa11.11□□□□□ -0.63
HDLBP-211ENST00000425989 DCAF8L1A6NGE4 600 aa11.11□□□□□ -0.63
HDLBP-211ENST00000425989 KLRF2D3W0D1 207 aa11.11□□□□□ -0.63
HDLBP-211ENST00000425989 CTNND1O60716 968 aaKnown RBP11.11□□□□□ -0.63
HDLBP-211ENST00000425989 RXRAP19793 462 aa11.11□□□□□ -0.63
HDLBP-211ENST00000425989 PFKFB3Q16875 520 aaPredicted RBP11.11□□□□□ -0.63
HDLBP-211ENST00000425989 TBC1D10BQ4KMP7 808 aaPredicted RBP11.11□□□□□ -0.63
HDLBP-211ENST00000425989 CCDC144CPQ8IYA2 1237 aa11.11□□□□□ -0.63
HDLBP-211ENST00000425989 SRBD1Q8N5C6 995 aaKnown RBP11.11□□□□□ -0.63
HDLBP-211ENST00000425989 TMEM87AQ8NBN3 555 aa11.11□□□□□ -0.63
HDLBP-211ENST00000425989 GMCL1P1Q8NEA9 526 aa11.11□□□□□ -0.63
HDLBP-211ENST00000425989 MYL10Q9BUA6 226 aa11.11□□□□□ -0.63
HDLBP-211ENST00000425989 FOXP1Q9H334 677 aaPredicted RBP11.11□□□□□ -0.63
HDLBP-211ENST00000425989 DNAJC18Q9H819 358 aa11.11□□□□□ -0.63
HDLBP-211ENST00000425989 MAD2L2Q9UI95 211 aa11.11□□□□□ -0.63
HDLBP-211ENST00000425989 POLR2AP24928 1970 aaKnown RBP11.1□□□□□ -0.63
HDLBP-211ENST00000425989 IQCA1LA6NCM1 817 aa11.1□□□□□ -0.63
HDLBP-211ENST00000425989 GLTPD2A6NH11 291 aa11.1□□□□□ -0.63
HDLBP-211ENST00000425989 MBD3O95983 291 aa11.1□□□□□ -0.63
HDLBP-211ENST00000425989 PDHBP11177 359 aa11.1□□□□□ -0.63
HDLBP-211ENST00000425989 U2AF2P26368 475 aaKnown RBP eCLIP11.1□□□□□ -0.632e-9■■■□□ 15.4
HDLBP-211ENST00000425989 KRT40Q6A162 431 aa11.1□□□□□ -0.63
HDLBP-211ENST00000425989 MCTP1Q6DN14 999 aa11.1□□□□□ -0.63
HDLBP-211ENST00000425989 PNMA8AQ86V59 439 aaPredicted RBP11.1□□□□□ -0.63
HDLBP-211ENST00000425989 PHKBQ93100 1093 aa11.1□□□□□ -0.63
HDLBP-211ENST00000425989 DCPSQ96C86 337 aaKnown RBP11.1□□□□□ -0.63
HDLBP-211ENST00000425989 RRP36Q96EU6 259 aaKnown RBP11.1□□□□□ -0.63
HDLBP-211ENST00000425989 GMCL1Q96IK5 515 aa11.1□□□□□ -0.63
HDLBP-211ENST00000425989 TEPSINQ96N21 525 aa11.1□□□□□ -0.63
HDLBP-211ENST00000425989 ZNF341Q9BYN7 854 aa11.1□□□□□ -0.63
HDLBP-211ENST00000425989 TMEM39BQ9GZU3 492 aa11.1□□□□□ -0.63
HDLBP-211ENST00000425989 GLT8D2Q9H1C3 349 aa11.1□□□□□ -0.63
HDLBP-211ENST00000425989 RIOX1Q9H6W3 641 aa11.1□□□□□ -0.63
HDLBP-211ENST00000425989 ZNF112Q9UJU3 913 aa11.1□□□□□ -0.63
HDLBP-211ENST00000425989 ELP1O95163 1332 aa11.09□□□□□ -0.63
HDLBP-211ENST00000425989 SIPA1L1O43166 1804 aa11.09□□□□□ -0.63
HDLBP-211ENST00000425989 PLA2G6O60733 806 aa11.09□□□□□ -0.63
HDLBP-211ENST00000425989 DDNO94850 711 aaPredicted RBP11.09□□□□□ -0.63
HDLBP-211ENST00000425989 MMP1P03956 469 aa11.09□□□□□ -0.63
HDLBP-211ENST00000425989 SCG2P13521 617 aa11.09□□□□□ -0.63
HDLBP-211ENST00000425989 EEF2P13639 858 aaKnown RBP11.09□□□□□ -0.63
HDLBP-211ENST00000425989 ICA1Q05084 483 aa11.09□□□□□ -0.63
HDLBP-211ENST00000425989 RESTQ13127 1097 aa11.09□□□□□ -0.63
HDLBP-211ENST00000425989 GNL2Q13823 731 aaKnown RBP11.09□□□□□ -0.63
HDLBP-211ENST00000425989 SEPT2Q15019 361 aa11.09□□□□□ -0.63
HDLBP-211ENST00000425989 CDC37L1Q7L3B6 337 aa11.09□□□□□ -0.63
HDLBP-211ENST00000425989 CCDC148Q8NFR7 591 aa11.09□□□□□ -0.63
HDLBP-211ENST00000425989 GOPCQ9HD26 462 aa11.09□□□□□ -0.63
HDLBP-211ENST00000425989 SEC63Q9UGP8 760 aaKnown RBP11.09□□□□□ -0.63
HDLBP-211ENST00000425989 TMX2Q9Y320 296 aa11.09□□□□□ -0.63
HDLBP-211ENST00000425989 SCN4AP35499 1836 aa11.08□□□□□ -0.64
HDLBP-211ENST00000425989 PHF20L1A8MW92 1017 aa11.08□□□□□ -0.64
HDLBP-211ENST00000425989 TRAK2O60296 914 aa11.08□□□□□ -0.64
HDLBP-211ENST00000425989 PRPF40AO75400 957 aaKnown RBP11.08□□□□□ -0.64
HDLBP-211ENST00000425989 GH2P01242 217 aa11.08□□□□□ -0.64
HDLBP-211ENST00000425989 GNA11P29992 359 aa11.08□□□□□ -0.64
HDLBP-211ENST00000425989 GUCY1A2P33402 732 aa11.08□□□□□ -0.64
HDLBP-211ENST00000425989 EPS15P42566 896 aa11.08□□□□□ -0.64
HDLBP-211ENST00000425989 SLC1A4P43007 532 aa11.08□□□□□ -0.64
HDLBP-211ENST00000425989 ZNF543Q08ER8 600 aa11.08□□□□□ -0.64
HDLBP-211ENST00000425989 PKN1Q16512 942 aa11.08□□□□□ -0.64
HDLBP-211ENST00000425989 ANGEL2Q5VTE6 544 aaKnown RBP11.08□□□□□ -0.64
HDLBP-211ENST00000425989 SLFN13Q68D06 897 aa11.08□□□□□ -0.64
HDLBP-211ENST00000425989 MCTP2Q6DN12 878 aa11.08□□□□□ -0.64
HDLBP-211ENST00000425989 USP48Q86UV5 1035 aa11.08□□□□□ -0.64
HDLBP-211ENST00000425989 RAB11FIP4Q86YS3 637 aa11.08□□□□□ -0.64
HDLBP-211ENST00000425989 BICD2Q8TD16 824 aa11.08□□□□□ -0.64
HDLBP-211ENST00000425989 CHURC1Q8WUH1 139 aa11.08□□□□□ -0.64
HDLBP-211ENST00000425989 AS3MTQ9HBK9 375 aa11.08□□□□□ -0.64
HDLBP-211ENST00000425989 LMBRD1Q9NUN5 540 aa11.08□□□□□ -0.64
HDLBP-211ENST00000425989 RCOR1Q9UKL0 485 aa11.08□□□□□ -0.64
HDLBP-211ENST00000425989 PNMA2Q9UL42 364 aa11.08□□□□□ -0.64
HDLBP-211ENST00000425989 BAZ2BQ9UIF8 2168 aaKnown RBP11.07□□□□□ -0.64
HDLBP-211ENST00000425989 PNMA6FA0A0J9YX94 578 aa11.07□□□□□ -0.64
HDLBP-211ENST00000425989 UNCXA6NJT0 531 aa11.07□□□□□ -0.64
HDLBP-211ENST00000425989 USP17L5A8MUK1 530 aa11.07□□□□□ -0.64
HDLBP-211ENST00000425989 F5H6K3 240 aa11.07□□□□□ -0.64
HDLBP-211ENST00000425989 PLEKHA8P1O95397 391 aa11.07□□□□□ -0.64
HDLBP-211ENST00000425989 BMP15O95972 392 aa11.07□□□□□ -0.64
HDLBP-211ENST00000425989 FDX1P10109 184 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms