RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 SPDYE16A6NNV3 312 aaPredicted RBP21.91■■□□□ 1.1
SMARCAL1-205ENST00000425815 VCPKMTQ9H867 229 aa21.91■■□□□ 1.1
SMARCAL1-205ENST00000425815 MKNK2Q9HBH9 465 aa21.91■■□□□ 1.1
SMARCAL1-205ENST00000425815 ARHGEF10LQ9HCE6 1279 aa21.91■■□□□ 1.1
SMARCAL1-205ENST00000425815 IGKV6D-41A0A0C4DH26 115 aa21.9■■□□□ 1.1
SMARCAL1-205ENST00000425815 PRDM1O75626 825 aa21.9■■□□□ 1.1
SMARCAL1-205ENST00000425815 SPICE1Q8N0Z3 855 aa21.9■■□□□ 1.1
SMARCAL1-205ENST00000425815 NACAP1Q9BZK3 213 aa21.9■■□□□ 1.1
SMARCAL1-205ENST00000425815 HELLSQ9NRZ9 838 aa21.9■■□□□ 1.1
SMARCAL1-205ENST00000425815 MKI67P46013 3256 aaKnown RBP21.89■■□□□ 1.09
SMARCAL1-205ENST00000425815 A0A0D9SFI3 127 aa21.89■■□□□ 1.09
SMARCAL1-205ENST00000425815 CCL5P13501 91 aa21.89■■□□□ 1.09
SMARCAL1-205ENST00000425815 COG2Q14746 738 aa21.89■■□□□ 1.09
SMARCAL1-205ENST00000425815 TICAM2Q86XR7 235 aa21.89■■□□□ 1.09
SMARCAL1-205ENST00000425815 LPAR1Q92633 364 aa21.89■■□□□ 1.09
SMARCAL1-205ENST00000425815 USP6NLQ92738 828 aa21.89■■□□□ 1.09
SMARCAL1-205ENST00000425815 TACC3Q9Y6A5 838 aa21.89■■□□□ 1.09
SMARCAL1-205ENST00000425815 MAPK4P31152 587 aa21.88■■□□□ 1.09
SMARCAL1-205ENST00000425815 PPARAQ07869 468 aa21.88■■□□□ 1.09
SMARCAL1-205ENST00000425815 MCMDC2Q4G0Z9 681 aa21.88■■□□□ 1.09
SMARCAL1-205ENST00000425815 NAPBQ9H115 298 aa21.88■■□□□ 1.09
SMARCAL1-205ENST00000425815 UNC93B1Q9H1C4 597 aa21.88■■□□□ 1.09
SMARCAL1-205ENST00000425815 INCENPQ9NQS7 918 aa21.88■■□□□ 1.09
SMARCAL1-205ENST00000425815 HOXC10Q9NYD6 342 aa21.88■■□□□ 1.09
SMARCAL1-205ENST00000425815 BIN2Q9UBW5 565 aaPredicted RBP21.88■■□□□ 1.09
SMARCAL1-205ENST00000425815 TRIM6-TRIM34B2RNG4 842 aa21.87■■□□□ 1.09
SMARCAL1-205ENST00000425815 INHAP05111 366 aa21.87■■□□□ 1.09
SMARCAL1-205ENST00000425815 PDE4AP27815 886 aa21.87■■□□□ 1.09
SMARCAL1-205ENST00000425815 DSG3P32926 999 aa21.87■■□□□ 1.09
SMARCAL1-205ENST00000425815 UBXN2AP68543 259 aa21.87■■□□□ 1.09
SMARCAL1-205ENST00000425815 ATP2B2Q01814 1243 aa21.87■■□□□ 1.09
SMARCAL1-205ENST00000425815 NMIQ13287 307 aaPredicted RBP21.87■■□□□ 1.09
SMARCAL1-205ENST00000425815 MORN1Q5T089 497 aa21.87■■□□□ 1.09
SMARCAL1-205ENST00000425815 GPR142Q7Z601 462 aa21.87■■□□□ 1.09
SMARCAL1-205ENST00000425815 RILPL2Q969X0 211 aa21.87■■□□□ 1.09
SMARCAL1-205ENST00000425815 SHISA4Q96DD7 197 aa21.87■■□□□ 1.09
SMARCAL1-205ENST00000425815 SH2D4AQ9H788 454 aa21.87■■□□□ 1.09
SMARCAL1-205ENST00000425815 NYAP2Q9P242 653 aa21.87■■□□□ 1.09
SMARCAL1-205ENST00000425815 MGAMO43451 1857 aa21.87■■□□□ 1.09
SMARCAL1-205ENST00000425815 TRIM32Q13049 653 aa21.86■■□□□ 1.09
SMARCAL1-205ENST00000425815 ALX1Q15699 326 aa21.86■■□□□ 1.09
SMARCAL1-205ENST00000425815 PLEKHH3Q7Z736 793 aa21.86■■□□□ 1.09
SMARCAL1-205ENST00000425815 ZNF589Q86UQ0 364 aaPredicted RBP21.86■■□□□ 1.09
SMARCAL1-205ENST00000425815 ZNF444Q8N0Y2 327 aaPredicted RBP21.86■■□□□ 1.09
SMARCAL1-205ENST00000425815 TANGO6Q9C0B7 1094 aa21.86■■□□□ 1.09
SMARCAL1-205ENST00000425815 RNF208Q9H0X6 261 aa21.86■■□□□ 1.09
SMARCAL1-205ENST00000425815 WDR46O15213 610 aaKnown RBP21.85■■□□□ 1.09
SMARCAL1-205ENST00000425815 GJB1P08034 283 aa21.85■■□□□ 1.09
SMARCAL1-205ENST00000425815 SDSP20132 328 aa21.85■■□□□ 1.09
SMARCAL1-205ENST00000425815 CYP2B6P20813 491 aa21.85■■□□□ 1.09
SMARCAL1-205ENST00000425815 NUDT12Q9BQG2 462 aa21.85■■□□□ 1.09
SMARCAL1-205ENST00000425815 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.85■■□□□ 1.09
SMARCAL1-205ENST00000425815 GJA8P48165 433 aa21.84■■□□□ 1.09
SMARCAL1-205ENST00000425815 CTDSPL2Q05D32 466 aa21.84■■□□□ 1.09
SMARCAL1-205ENST00000425815 FAM47AQ5JRC9 791 aa21.84■■□□□ 1.09
SMARCAL1-205ENST00000425815 NEDD1Q8NHV4 660 aa21.84■■□□□ 1.09
SMARCAL1-205ENST00000425815 MKL1Q969V6 931 aa21.84■■□□□ 1.09
SMARCAL1-205ENST00000425815 ATG4CQ96DT6 458 aa21.84■■□□□ 1.09
SMARCAL1-205ENST00000425815 CEP95Q96GE4 821 aa21.84■■□□□ 1.09
SMARCAL1-205ENST00000425815 MTMR4Q9NYA4 1195 aa21.84■■□□□ 1.09
SMARCAL1-205ENST00000425815 CLIP2Q9UDT6 1046 aa21.84■■□□□ 1.09
SMARCAL1-205ENST00000425815 ANAPC4Q9UJX5 808 aa21.84■■□□□ 1.09
SMARCAL1-205ENST00000425815 ADAMTS5Q9UNA0 930 aa21.84■■□□□ 1.09
SMARCAL1-205ENST00000425815 FLOT1O75955 427 aa21.83■■□□□ 1.09
SMARCAL1-205ENST00000425815 FGAP02671 866 aa21.83■■□□□ 1.09
SMARCAL1-205ENST00000425815 HSPD1P10809 573 aaKnown RBP21.83■■□□□ 1.09
SMARCAL1-205ENST00000425815 XRCC5P13010 732 aaKnown RBP21.83■■□□□ 1.09
SMARCAL1-205ENST00000425815 PDE4BQ07343 736 aa21.83■■□□□ 1.09
SMARCAL1-205ENST00000425815 TRIB2Q92519 343 aa21.83■■□□□ 1.09
SMARCAL1-205ENST00000425815 MOV10L1Q9BXT6 1211 aaKnown RBP21.83■■□□□ 1.09
SMARCAL1-205ENST00000425815 ZNF287Q9HBT7 754 aa21.83■■□□□ 1.09
SMARCAL1-205ENST00000425815 FBXO28Q9NVF7 368 aa21.83■■□□□ 1.09
SMARCAL1-205ENST00000425815 KIAA0100Q14667 2235 aaKnown RBP21.83■■□□□ 1.08
SMARCAL1-205ENST00000425815 DOCK3Q8IZD9 2030 aa21.82■■□□□ 1.08
SMARCAL1-205ENST00000425815 F5H6K3 240 aa21.82■■□□□ 1.08
SMARCAL1-205ENST00000425815 FGRP09769 529 aa21.82■■□□□ 1.08
SMARCAL1-205ENST00000425815 CCNA1P78396 465 aa21.82■■□□□ 1.08
SMARCAL1-205ENST00000425815 TFAP4Q01664 338 aa21.82■■□□□ 1.08
SMARCAL1-205ENST00000425815 KLRC3Q07444 240 aa21.82■■□□□ 1.08
SMARCAL1-205ENST00000425815 FAM83BQ5T0W9 1011 aa21.82■■□□□ 1.08
SMARCAL1-205ENST00000425815 CCAR1Q8IX12 1150 aaKnown RBP21.82■■□□□ 1.08
SMARCAL1-205ENST00000425815 SOCS4Q8WXH5 440 aa21.82■■□□□ 1.08
SMARCAL1-205ENST00000425815 GOPCQ9HD26 462 aa21.82■■□□□ 1.08
SMARCAL1-205ENST00000425815 PAK6Q9NQU5 681 aaPredicted RBP21.82■■□□□ 1.08
SMARCAL1-205ENST00000425815 NDUFB10O96000 172 aa21.81■■□□□ 1.08
SMARCAL1-205ENST00000425815 HMGCRP04035 888 aa21.81■■□□□ 1.08
SMARCAL1-205ENST00000425815 SLC3A2P08195 630 aaKnown RBP21.81■■□□□ 1.08
SMARCAL1-205ENST00000425815 PTPREP23469 700 aa21.81■■□□□ 1.08
SMARCAL1-205ENST00000425815 CCL14Q16627 93 aa21.81■■□□□ 1.08
SMARCAL1-205ENST00000425815 U2AF1L4Q8WU68 220 aaKnown RBP21.81■■□□□ 1.08
SMARCAL1-205ENST00000425815 NUP88Q99567 741 aaPredicted RBP21.81■■□□□ 1.08
SMARCAL1-205ENST00000425815 SPATC1LQ9H0A9 340 aa21.81■■□□□ 1.08
SMARCAL1-205ENST00000425815 RBBP6Q7Z6E9 1792 aaKnown RBP21.81■■□□□ 1.08
SMARCAL1-205ENST00000425815 PLXNB2O15031 1838 aa21.8■■□□□ 1.08
SMARCAL1-205ENST00000425815 GREB1LQ9C091 1923 aaPredicted RBP21.8■■□□□ 1.08
SMARCAL1-205ENST00000425815 PLIN4Q96Q06 1357 aa21.8■■□□□ 1.08
SMARCAL1-205ENST00000425815 SGPL1O95470 568 aa21.8■■□□□ 1.08
SMARCAL1-205ENST00000425815 MAP2K5Q13163 448 aa21.8■■□□□ 1.08
SMARCAL1-205ENST00000425815 TMEM132BQ14DG7 1078 aa21.8■■□□□ 1.08
SMARCAL1-205ENST00000425815 UBE2Q1Q7Z7E8 422 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms