RNA–Protein interactions for RNA: ENST00000422622.3

SSPN-202, Transcript of sarcospan, humanhuman

TSL 2 BASIC

Gene SSPN, Length 4,348 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-202ENST00000422622 POLR2DO15514 142 aaKnown RBP11.43□□□□□ -0.58
SSPN-202ENST00000422622 CALM1P0DP23 149 aa11.43□□□□□ -0.58
SSPN-202ENST00000422622 CALM2P0DP24 149 aa11.43□□□□□ -0.58
SSPN-202ENST00000422622 CALM3P0DP25 149 aa11.43□□□□□ -0.58
SSPN-202ENST00000422622 USH1GQ495M9 461 aa11.43□□□□□ -0.58
SSPN-202ENST00000422622 CRKP46108 304 aa11.43□□□□□ -0.58
SSPN-202ENST00000422622 PTPN21Q16825 1174 aa11.43□□□□□ -0.58
SSPN-202ENST00000422622 CEP95Q96GE4 821 aa11.43□□□□□ -0.58
SSPN-202ENST00000422622 PCDHB6Q9Y5E3 794 aa11.43□□□□□ -0.58
SSPN-202ENST00000422622 ITGB4P16144 1822 aa11.43□□□□□ -0.58
SSPN-202ENST00000422622 ZNF202O95125 648 aa11.43□□□□□ -0.58
SSPN-202ENST00000422622 IFNAR1P17181 557 aa11.43□□□□□ -0.58
SSPN-202ENST00000422622 DLGAP5Q15398 846 aa11.43□□□□□ -0.58
SSPN-202ENST00000422622 PLCD4Q9BRC7 762 aa11.43□□□□□ -0.58
SSPN-202ENST00000422622 BIN2Q9UBW5 565 aaPredicted RBP11.43□□□□□ -0.58
SSPN-202ENST00000422622 SERPINB13Q9UIV8 391 aa11.43□□□□□ -0.58
SSPN-202ENST00000422622 FMNL1O95466 1100 aaPredicted RBP11.42□□□□□ -0.58
SSPN-202ENST00000422622 LMOD1P29536 600 aaPredicted RBP11.42□□□□□ -0.58
SSPN-202ENST00000422622 FAM160A1Q05DH4 1040 aa11.42□□□□□ -0.58
SSPN-202ENST00000422622 CCDC186Q7Z3E2 898 aa11.42□□□□□ -0.58
SSPN-202ENST00000422622 PPFIBP1Q86W92 1011 aa11.42□□□□□ -0.58
SSPN-202ENST00000422622 GRAMD1CQ8IYS0 662 aa11.42□□□□□ -0.58
SSPN-202ENST00000422622 PFKFB1P16118 471 aa11.42□□□□□ -0.58
SSPN-202ENST00000422622 DPEP1P16444 411 aa11.42□□□□□ -0.58
SSPN-202ENST00000422622 STX17P56962 302 aa11.42□□□□□ -0.58
SSPN-202ENST00000422622 C12orf60Q5U649 245 aa11.42□□□□□ -0.58
SSPN-202ENST00000422622 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.42□□□□□ -0.58
SSPN-202ENST00000422622 GOLPH3LQ9H4A5 285 aa11.42□□□□□ -0.58
SSPN-202ENST00000422622 MAPK8IP1Q9UQF2 711 aa11.42□□□□□ -0.58
SSPN-202ENST00000422622 COBLO75128 1261 aa11.42□□□□□ -0.58
SSPN-202ENST00000422622 INF2Q27J81 1249 aa11.42□□□□□ -0.58
SSPN-202ENST00000422622 FILIP1LQ4L180 1135 aa11.42□□□□□ -0.58
SSPN-202ENST00000422622 NIM1KQ8IY84 436 aa11.42□□□□□ -0.58
SSPN-202ENST00000422622 BBXQ8WY36 941 aaPredicted RBP11.42□□□□□ -0.58
SSPN-202ENST00000422622 RRP36Q96EU6 259 aaKnown RBP11.42□□□□□ -0.58
SSPN-202ENST00000422622 TMEM47Q9BQJ4 181 aa11.42□□□□□ -0.58
SSPN-202ENST00000422622 RBM28Q9NW13 759 aaKnown RBP11.42□□□□□ -0.58
SSPN-202ENST00000422622 HDAC9Q9UKV0 1011 aa11.42□□□□□ -0.58
SSPN-202ENST00000422622 CEP131Q9UPN4 1083 aa11.42□□□□□ -0.58
SSPN-202ENST00000422622 PLCH1Q4KWH8 1693 aa11.42□□□□□ -0.58
SSPN-202ENST00000422622 FLT1P17948 1338 aa11.42□□□□□ -0.58
SSPN-202ENST00000422622 ONECUT3O60422 494 aaPredicted RBP11.41□□□□□ -0.58
SSPN-202ENST00000422622 TXLNAP40222 546 aa11.41□□□□□ -0.58
SSPN-202ENST00000422622 PNOCQ13519 176 aa11.41□□□□□ -0.58
SSPN-202ENST00000422622 KRI1Q8N9T8 703 aaKnown RBP11.41□□□□□ -0.58
SSPN-202ENST00000422622 LINC00301Q8NCQ3 95 aa11.41□□□□□ -0.58
SSPN-202ENST00000422622 CPLX3Q8WVH0 158 aa11.41□□□□□ -0.58
SSPN-202ENST00000422622 CCDC47Q96A33 483 aaKnown RBP11.41□□□□□ -0.58
SSPN-202ENST00000422622 COA7Q96BR5 231 aa11.41□□□□□ -0.58
SSPN-202ENST00000422622 CDK5RAP3Q96JB5 506 aa11.41□□□□□ -0.58
SSPN-202ENST00000422622 CSRNP1Q96S65 589 aa11.41□□□□□ -0.58
SSPN-202ENST00000422622 AKR1B1P15121 316 aa11.41□□□□□ -0.58
SSPN-202ENST00000422622 RDXP35241 583 aaKnown RBP11.41□□□□□ -0.58
SSPN-202ENST00000422622 SLC1A4P43007 532 aa11.41□□□□□ -0.58
SSPN-202ENST00000422622 CCDC84Q86UT8 332 aaPredicted RBP11.41□□□□□ -0.58
SSPN-202ENST00000422622 CLSTN2Q9H4D0 955 aa11.41□□□□□ -0.58
SSPN-202ENST00000422622 ANO10Q9NW15 660 aa11.41□□□□□ -0.58
SSPN-202ENST00000422622 SCG2P13521 617 aa11.41□□□□□ -0.58
SSPN-202ENST00000422622 SRBD1Q8N5C6 995 aaKnown RBP11.41□□□□□ -0.58
SSPN-202ENST00000422622 SIPA1L3O60292 1781 aaPredicted RBP11.41□□□□□ -0.58
SSPN-202ENST00000422622 USP17L5A8MUK1 530 aa11.41□□□□□ -0.58
SSPN-202ENST00000422622 PLSCR1O15162 318 aa11.41□□□□□ -0.58
SSPN-202ENST00000422622 MYO1BO43795 1136 aa11.41□□□□□ -0.58
SSPN-202ENST00000422622 VEGFAP15692 232 aaPredicted RBP11.41□□□□□ -0.58
SSPN-202ENST00000422622 FAM200AQ8TCP9 573 aa11.41□□□□□ -0.58
SSPN-202ENST00000422622 PIGSQ96S52 555 aa11.41□□□□□ -0.58
SSPN-202ENST00000422622 KCNH3Q9ULD8 1083 aa11.41□□□□□ -0.58
SSPN-202ENST00000422622 CERKLQ49MI3 558 aaPredicted RBP11.4□□□□□ -0.58
SSPN-202ENST00000422622 NBPF11Q86T75 865 aa11.4□□□□□ -0.58
SSPN-202ENST00000422622 NUP88Q99567 741 aaPredicted RBP11.4□□□□□ -0.58
SSPN-202ENST00000422622 CBX8Q9HC52 389 aa11.4□□□□□ -0.58
SSPN-202ENST00000422622 CASP1P29466 404 aa11.4□□□□□ -0.58
SSPN-202ENST00000422622 STX1AQ16623 288 aa11.4□□□□□ -0.58
SSPN-202ENST00000422622 TTC38Q5R3I4 469 aa11.4□□□□□ -0.58
SSPN-202ENST00000422622 SGMS1Q86VZ5 419 aa11.4□□□□□ -0.58
SSPN-202ENST00000422622 EEF2KMTQ96G04 330 aa11.4□□□□□ -0.58
SSPN-202ENST00000422622 ALDH8A1Q9H2A2 487 aaPredicted RBP11.4□□□□□ -0.58
SSPN-202ENST00000422622 MMP1P03956 469 aa11.4□□□□□ -0.58
SSPN-202ENST00000422622 ZNF76P36508 570 aa11.4□□□□□ -0.58
SSPN-202ENST00000422622 UBA7P41226 1012 aa11.4□□□□□ -0.58
SSPN-202ENST00000422622 CLEC17AQ6ZS10 378 aa11.4□□□□□ -0.58
SSPN-202ENST00000422622 FCHSD1Q86WN1 690 aa11.4□□□□□ -0.58
SSPN-202ENST00000422622 CERS5Q8N5B7 392 aa11.4□□□□□ -0.58
SSPN-202ENST00000422622 TAF1P21675 1872 aa11.39□□□□□ -0.59
SSPN-202ENST00000422622 GNAQP50148 359 aa11.39□□□□□ -0.59
SSPN-202ENST00000422622 ARHGAP29Q52LW3 1261 aa11.39□□□□□ -0.59
SSPN-202ENST00000422622 RILPL1Q5EBL4 403 aa11.39□□□□□ -0.59
SSPN-202ENST00000422622 ABCA3Q99758 1704 aa11.39□□□□□ -0.59
SSPN-202ENST00000422622 SMCO2A6NFE2 343 aa11.39□□□□□ -0.59
SSPN-202ENST00000422622 CCNT1O60563 726 aaKnown RBP11.39□□□□□ -0.59
SSPN-202ENST00000422622 CDC42EP5Q6NZY7 148 aa11.39□□□□□ -0.59
SSPN-202ENST00000422622 ZFPM1Q8IX07 1006 aa11.39□□□□□ -0.59
SSPN-202ENST00000422622 IPO4Q8TEX9 1081 aaKnown RBP11.39□□□□□ -0.59
SSPN-202ENST00000422622 RTFDC1Q9BY42 306 aaPredicted RBP11.39□□□□□ -0.59
SSPN-202ENST00000422622 BLZF1Q9H2G9 400 aa11.39□□□□□ -0.59
SSPN-202ENST00000422622 RCOR1Q9UKL0 485 aa11.39□□□□□ -0.59
SSPN-202ENST00000422622 ERCC3P19447 782 aa11.39□□□□□ -0.59
SSPN-202ENST00000422622 TAF3Q5VWG9 929 aa11.39□□□□□ -0.59
SSPN-202ENST00000422622 PRAMEF18Q5VWM3 479 aa11.39□□□□□ -0.59
SSPN-202ENST00000422622 ADALQ6DHV7 355 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms