RNA–Protein interactions for RNA: ENST00000422379.2

HPS4-204, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 1,942 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-204ENST00000422379 PTPDC1A2A3K4 754 aa10.46□□□□□ -0.74
HPS4-204ENST00000422379 IQCA1LA6NCM1 817 aa10.46□□□□□ -0.74
HPS4-204ENST00000422379 BAG4O95429 457 aaKnown RBP10.46□□□□□ -0.74
HPS4-204ENST00000422379 GJB2P29033 226 aa10.46□□□□□ -0.74
HPS4-204ENST00000422379 NT5C2P49902 561 aa10.46□□□□□ -0.74
HPS4-204ENST00000422379 PRKG1Q13976 671 aa10.46□□□□□ -0.74
HPS4-204ENST00000422379 TMEM179Q6ZVK1 233 aa10.46□□□□□ -0.74
HPS4-204ENST00000422379 ZC3H15Q8WU90 426 aaKnown RBP10.46□□□□□ -0.74
HPS4-204ENST00000422379 PHKBQ93100 1093 aa10.46□□□□□ -0.74
HPS4-204ENST00000422379 ZKSCAN4Q969J2 545 aaPredicted RBP10.46□□□□□ -0.74
HPS4-204ENST00000422379 DCPSQ96C86 337 aaKnown RBP10.46□□□□□ -0.74
HPS4-204ENST00000422379 SHISA4Q96DD7 197 aa10.46□□□□□ -0.74
HPS4-204ENST00000422379 AIFM3Q96NN9 605 aa10.46□□□□□ -0.74
HPS4-204ENST00000422379 GJB4Q9NTQ9 266 aa10.46□□□□□ -0.74
HPS4-204ENST00000422379 ZNF112Q9UJU3 913 aa10.46□□□□□ -0.74
HPS4-204ENST00000422379 USP17L5A8MUK1 530 aa10.45□□□□□ -0.74
HPS4-204ENST00000422379 TTLL1O95922 423 aa10.45□□□□□ -0.74
HPS4-204ENST00000422379 GOLGA8HP0CJ92 632 aa10.45□□□□□ -0.74
HPS4-204ENST00000422379 TOP1P11387 765 aaKnown RBP10.45□□□□□ -0.74
HPS4-204ENST00000422379 VEGFAP15692 232 aaPredicted RBP10.45□□□□□ -0.74
HPS4-204ENST00000422379 DGKZQ13574 1117 aa10.45□□□□□ -0.74
HPS4-204ENST00000422379 RTN1Q16799 776 aa10.45□□□□□ -0.74
HPS4-204ENST00000422379 USP17L2Q6R6M4 530 aa10.45□□□□□ -0.74
HPS4-204ENST00000422379 CATIPQ7Z7H3 387 aa10.45□□□□□ -0.74
HPS4-204ENST00000422379 SULF1Q8IWU6 871 aa10.45□□□□□ -0.74
HPS4-204ENST00000422379 TMTC2Q8N394 836 aa10.45□□□□□ -0.74
HPS4-204ENST00000422379 CCDC82Q8N4S0 544 aa10.45□□□□□ -0.74
HPS4-204ENST00000422379 SRBD1Q8N5C6 995 aaKnown RBP10.45□□□□□ -0.74
HPS4-204ENST00000422379 CDCA5Q96FF9 252 aa10.45□□□□□ -0.74
HPS4-204ENST00000422379 KAT14Q9H8E8 782 aa10.45□□□□□ -0.74
HPS4-204ENST00000422379 MAD2L2Q9UI95 211 aa10.45□□□□□ -0.74
HPS4-204ENST00000422379 TAOK2Q9UL54 1235 aa10.45□□□□□ -0.74
HPS4-204ENST00000422379 PPP2R3BQ9Y5P8 575 aa10.45□□□□□ -0.74
HPS4-204ENST00000422379 hCG_1642624A0A1W2PR95 340 aa10.45□□□□□ -0.74
HPS4-204ENST00000422379 USP2O75604 605 aaPredicted RBP10.45□□□□□ -0.74
HPS4-204ENST00000422379 DDAH1O94760 285 aa10.45□□□□□ -0.74
HPS4-204ENST00000422379 ATP2B2Q01814 1243 aa10.45□□□□□ -0.74
HPS4-204ENST00000422379 ICA1Q05084 483 aa10.45□□□□□ -0.74
HPS4-204ENST00000422379 MKL1Q969V6 931 aa10.45□□□□□ -0.74
HPS4-204ENST00000422379 KLRG1Q96E93 195 aa10.45□□□□□ -0.74
HPS4-204ENST00000422379 CHAMP1Q96JM3 812 aa10.45□□□□□ -0.74
HPS4-204ENST00000422379 KANSL2Q9H9L4 492 aa10.45□□□□□ -0.74
HPS4-204ENST00000422379 CYTH3O43739 400 aa10.44□□□□□ -0.74
HPS4-204ENST00000422379 SNHG28P0DPA3 235 aa10.44□□□□□ -0.74
HPS4-204ENST00000422379 PDHBP11177 359 aa10.44□□□□□ -0.74
HPS4-204ENST00000422379 VASPP50552 380 aaPredicted RBP10.44□□□□□ -0.74
HPS4-204ENST00000422379 RCAN1P53805 252 aa10.44□□□□□ -0.74
HPS4-204ENST00000422379 GRM4Q14833 912 aa10.44□□□□□ -0.74
HPS4-204ENST00000422379 TMTC3Q6ZXV5 915 aa10.44□□□□□ -0.74
HPS4-204ENST00000422379 PNMA8AQ86V59 439 aaPredicted RBP10.44□□□□□ -0.74
HPS4-204ENST00000422379 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.44□□□□□ -0.74
HPS4-204ENST00000422379 WRNIP1Q96S55 665 aa10.44□□□□□ -0.74
HPS4-204ENST00000422379 NUP88Q99567 741 aaPredicted RBP10.44□□□□□ -0.74
HPS4-204ENST00000422379 NYAP2Q9P242 653 aa10.44□□□□□ -0.74
HPS4-204ENST00000422379 SMC3Q9UQE7 1217 aa10.44□□□□□ -0.74
HPS4-204ENST00000422379 FRMPD2Q68DX3 1309 aaPredicted RBP10.43□□□□□ -0.74
HPS4-204ENST00000422379 PALM3A6NDB9 673 aaPredicted RBP10.43□□□□□ -0.74
HPS4-204ENST00000422379 BRD1O95696 1058 aa10.43□□□□□ -0.74
HPS4-204ENST00000422379 SYT1P21579 422 aa10.43□□□□□ -0.74
HPS4-204ENST00000422379 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.43□□□□□ -0.74
HPS4-204ENST00000422379 LLPHQ9BRT6 129 aaKnown RBP10.43□□□□□ -0.74
HPS4-204ENST00000422379 ZNF341Q9BYN7 854 aa10.43□□□□□ -0.74
HPS4-204ENST00000422379 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.43□□□□□ -0.74
HPS4-204ENST00000422379 OTOFQ9HC10 1997 aa10.43□□□□□ -0.74
HPS4-204ENST00000422379 CNTNAP5Q8WYK1 1306 aa10.43□□□□□ -0.74
HPS4-204ENST00000422379 ATAD5Q96QE3 1844 aa10.43□□□□□ -0.74
HPS4-204ENST00000422379 GOLGA6L22H0YM25 854 aa10.43□□□□□ -0.74
HPS4-204ENST00000422379 CTNND1O60716 968 aaKnown RBP10.43□□□□□ -0.74
HPS4-204ENST00000422379 NDUFB10O96000 172 aa10.43□□□□□ -0.74
HPS4-204ENST00000422379 IFNAR1P17181 557 aa10.43□□□□□ -0.74
HPS4-204ENST00000422379 PTMSP20962 102 aa10.43□□□□□ -0.74
HPS4-204ENST00000422379 FOSBP53539 338 aa10.43□□□□□ -0.74
HPS4-204ENST00000422379 CCDC178Q5BJE1 867 aa10.43□□□□□ -0.74
HPS4-204ENST00000422379 FOXD4L5Q5VV16 416 aaPredicted RBP10.43□□□□□ -0.74
HPS4-204ENST00000422379 MCTP1Q6DN14 999 aa10.43□□□□□ -0.74
HPS4-204ENST00000422379 OTUD7BQ6GQQ9 843 aa10.43□□□□□ -0.74
HPS4-204ENST00000422379 TTBK2Q6IQ55 1244 aa10.43□□□□□ -0.74
HPS4-204ENST00000422379 FOXD4L4Q8WXT5 416 aaPredicted RBP10.43□□□□□ -0.74
HPS4-204ENST00000422379 CLEC11AQ9Y240 323 aa10.43□□□□□ -0.74
HPS4-204ENST00000422379 BAZ2BQ9UIF8 2168 aaKnown RBP10.43□□□□□ -0.74
HPS4-204ENST00000422379 MYH4Q9Y623 1939 aa10.42□□□□□ -0.74
HPS4-204ENST00000422379 F5H6K3 240 aa10.42□□□□□ -0.74
HPS4-204ENST00000422379 KLRC3Q07444 240 aa10.42□□□□□ -0.74
HPS4-204ENST00000422379 VGLL4Q14135 290 aa10.42□□□□□ -0.74
HPS4-204ENST00000422379 PKN1Q16512 942 aa10.42□□□□□ -0.74
HPS4-204ENST00000422379 SUPT20HL1Q3ZLR7 823 aa10.42□□□□□ -0.74
HPS4-204ENST00000422379 SYNE3Q6ZMZ3 975 aa10.42□□□□□ -0.74
HPS4-204ENST00000422379 CDC37L1Q7L3B6 337 aa10.42□□□□□ -0.74
HPS4-204ENST00000422379 SPICE1Q8N0Z3 855 aa10.42□□□□□ -0.74
HPS4-204ENST00000422379 CLMNQ96JQ2 1002 aa10.42□□□□□ -0.74
HPS4-204ENST00000422379 GZF1Q9H116 711 aaPredicted RBP10.42□□□□□ -0.74
HPS4-204ENST00000422379 CABP5Q9NP86 173 aa10.42□□□□□ -0.74
HPS4-204ENST00000422379 ORC3Q9UBD5 711 aaPredicted RBP10.42□□□□□ -0.74
HPS4-204ENST00000422379 MTMR6Q9Y217 621 aa10.42□□□□□ -0.74
HPS4-204ENST00000422379 TMX2Q9Y320 296 aa10.42□□□□□ -0.74
HPS4-204ENST00000422379 SNCAIPQ9Y6H5 919 aa10.42□□□□□ -0.74
HPS4-204ENST00000422379 CPLX1O14810 134 aa10.41□□□□□ -0.74
HPS4-204ENST00000422379 FMNL1O95466 1100 aaPredicted RBP10.41□□□□□ -0.74
HPS4-204ENST00000422379 ASNSP08243 561 aa10.41□□□□□ -0.74
HPS4-204ENST00000422379 PTPRAP18433 802 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 232.8 ms