RNA–Protein interactions for RNA: ENST00000421870.1

LINC01840-201, Transcript of long intergenic non-protein coding RNA 1840, humanhuman

TSL 4 BASIC

Gene LINC01840, Length 571 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01840-201ENST00000421870 MCMDC2Q4G0Z9 681 aa17.7■□□□□ 0.42
LINC01840-201ENST00000421870 CCDC129Q6ZRS4 1044 aa17.7■□□□□ 0.42
LINC01840-201ENST00000421870 CLEC10AQ8IUN9 316 aa17.7■□□□□ 0.42
LINC01840-201ENST00000421870 SLAIN1Q8ND83 568 aa17.7■□□□□ 0.42
LINC01840-201ENST00000421870 NAPBQ9H115 298 aa17.7■□□□□ 0.42
LINC01840-201ENST00000421870 SH2D4AQ9H788 454 aa17.7■□□□□ 0.42
LINC01840-201ENST00000421870 VCPKMTQ9H867 229 aa17.7■□□□□ 0.42
LINC01840-201ENST00000421870 ZNF287Q9HBT7 754 aa17.7■□□□□ 0.42
LINC01840-201ENST00000421870 HOXC10Q9NYD6 342 aa17.7■□□□□ 0.42
LINC01840-201ENST00000421870 ADCY3O60266 1144 aa17.69■□□□□ 0.42
LINC01840-201ENST00000421870 CNMDO75829 334 aa17.69■□□□□ 0.42
LINC01840-201ENST00000421870 ALX1Q15699 326 aa17.69■□□□□ 0.42
LINC01840-201ENST00000421870 ZNF444Q8N0Y2 327 aaPredicted RBP17.69■□□□□ 0.42
LINC01840-201ENST00000421870 RILPL2Q969X0 211 aa17.69■□□□□ 0.42
LINC01840-201ENST00000421870 FAM227BQ96M60 508 aa17.69■□□□□ 0.42
LINC01840-201ENST00000421870 TMEM106CQ9BVX2 250 aa17.69■□□□□ 0.42
LINC01840-201ENST00000421870 PARP14Q460N5 1801 aa17.68■□□□□ 0.42
LINC01840-201ENST00000421870 IGKV6D-41A0A0C4DH26 115 aa17.68■□□□□ 0.42
LINC01840-201ENST00000421870 SDSP20132 328 aa17.68■□□□□ 0.42
LINC01840-201ENST00000421870 MAPK4P31152 587 aa17.68■□□□□ 0.42
LINC01840-201ENST00000421870 VPS53Q5VIR6 699 aa17.68■□□□□ 0.42
LINC01840-201ENST00000421870 STK11IPQ8N1F8 1099 aa17.68■□□□□ 0.42
LINC01840-201ENST00000421870 NYAP2Q9P242 653 aa17.68■□□□□ 0.42
LINC01840-201ENST00000421870 ANAPC4Q9UJX5 808 aa17.68■□□□□ 0.42
LINC01840-201ENST00000421870 MYH4Q9Y623 1939 aa17.67■□□□□ 0.42
LINC01840-201ENST00000421870 A0A0D9SFI3 127 aa17.67■□□□□ 0.42
LINC01840-201ENST00000421870 SPDYE16A6NNV3 312 aaPredicted RBP17.67■□□□□ 0.42
LINC01840-201ENST00000421870 EN2P19622 333 aaPredicted RBP17.67■□□□□ 0.42
LINC01840-201ENST00000421870 PDE4BQ07343 736 aa17.67■□□□□ 0.42
LINC01840-201ENST00000421870 PPARAQ07869 468 aa17.67■□□□□ 0.42
LINC01840-201ENST00000421870 MTFR1Q15390 333 aa17.67■□□□□ 0.42
LINC01840-201ENST00000421870 MKL1Q969V6 931 aa17.67■□□□□ 0.42
LINC01840-201ENST00000421870 PORCNQ9H237 461 aa17.67■□□□□ 0.42
LINC01840-201ENST00000421870 BTBD7Q9P203 1132 aa17.67■□□□□ 0.42
LINC01840-201ENST00000421870 WDR46O15213 610 aaKnown RBP17.66■□□□□ 0.42
LINC01840-201ENST00000421870 PRDM1O75626 825 aa17.66■□□□□ 0.42
LINC01840-201ENST00000421870 SLC3A2P08195 630 aaKnown RBP17.66■□□□□ 0.42
LINC01840-201ENST00000421870 PDE4AP27815 886 aa17.66■□□□□ 0.42
LINC01840-201ENST00000421870 DSG3P32926 999 aa17.66■□□□□ 0.42
LINC01840-201ENST00000421870 UBXN2AP68543 259 aa17.66■□□□□ 0.42
LINC01840-201ENST00000421870 NMIQ13287 307 aaPredicted RBP17.66■□□□□ 0.42
LINC01840-201ENST00000421870 SPICE1Q8N0Z3 855 aa17.66■□□□□ 0.42
LINC01840-201ENST00000421870 NEDD1Q8NHV4 660 aa17.66■□□□□ 0.42
LINC01840-201ENST00000421870 USP6NLQ92738 828 aa17.66■□□□□ 0.42
LINC01840-201ENST00000421870 PAGR1Q9BTK6 254 aa17.66■□□□□ 0.42
LINC01840-201ENST00000421870 MKI67P46013 3256 aaKnown RBP17.65■□□□□ 0.42
LINC01840-201ENST00000421870 FGAP02671 866 aa17.65■□□□□ 0.42
LINC01840-201ENST00000421870 FGRP09769 529 aa17.65■□□□□ 0.42
LINC01840-201ENST00000421870 HSPD1P10809 573 aaKnown RBP17.65■□□□□ 0.42
LINC01840-201ENST00000421870 XRCC5P13010 732 aaKnown RBP17.65■□□□□ 0.42
LINC01840-201ENST00000421870 ELNP15502 786 aa17.65■□□□□ 0.42
LINC01840-201ENST00000421870 CCNA1P78396 465 aa17.65■□□□□ 0.42
LINC01840-201ENST00000421870 ATP2B2Q01814 1243 aa17.65■□□□□ 0.42
LINC01840-201ENST00000421870 GPR142Q7Z601 462 aa17.65■□□□□ 0.42
LINC01840-201ENST00000421870 TANGO6Q9C0B7 1094 aa17.65■□□□□ 0.42
LINC01840-201ENST00000421870 GOPCQ9HD26 462 aa17.65■□□□□ 0.42
LINC01840-201ENST00000421870 MTMR4Q9NYA4 1195 aa17.65■□□□□ 0.42
LINC01840-201ENST00000421870 ADAMTS5Q9UNA0 930 aa17.65■□□□□ 0.42
LINC01840-201ENST00000421870 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.65■□□□□ 0.42
LINC01840-201ENST00000421870 F5H6K3 240 aa17.64■□□□□ 0.41
LINC01840-201ENST00000421870 MYCP01106 439 aaPredicted RBP17.64■□□□□ 0.41
LINC01840-201ENST00000421870 GJB1P08034 283 aa17.64■□□□□ 0.41
LINC01840-201ENST00000421870 CCL5P13501 91 aa17.64■□□□□ 0.41
LINC01840-201ENST00000421870 KLRC3Q07444 240 aa17.64■□□□□ 0.41
LINC01840-201ENST00000421870 MORN1Q5T089 497 aa17.64■□□□□ 0.41
LINC01840-201ENST00000421870 PLEKHH3Q7Z736 793 aa17.64■□□□□ 0.41
LINC01840-201ENST00000421870 ZNF589Q86UQ0 364 aaPredicted RBP17.64■□□□□ 0.41
LINC01840-201ENST00000421870 SOCS4Q8WXH5 440 aa17.64■□□□□ 0.41
LINC01840-201ENST00000421870 NUDT12Q9BQG2 462 aa17.64■□□□□ 0.41
LINC01840-201ENST00000421870 BIN2Q9UBW5 565 aaPredicted RBP17.64■□□□□ 0.41
LINC01840-201ENST00000421870 CLIP2Q9UDT6 1046 aa17.64■□□□□ 0.41
LINC01840-201ENST00000421870 SYNPO2Q9UMS6 1093 aa17.64■□□□□ 0.41
LINC01840-201ENST00000421870 A0A0G2JMZ2 1700 aa17.64■□□□□ 0.41
LINC01840-201ENST00000421870 TFAP4Q01664 338 aa17.63■□□□□ 0.41
LINC01840-201ENST00000421870 CTDSPL2Q05D32 466 aa17.63■□□□□ 0.41
LINC01840-201ENST00000421870 CCAR1Q8IX12 1150 aaKnown RBP17.63■□□□□ 0.41
LINC01840-201ENST00000421870 MB21D1Q8N884 522 aa17.63■□□□□ 0.41
LINC01840-201ENST00000421870 CEP95Q96GE4 821 aa17.63■□□□□ 0.41
LINC01840-201ENST00000421870 TACC3Q9Y6A5 838 aa17.63■□□□□ 0.41
LINC01840-201ENST00000421870 ZMYM6O95789 1325 aa17.63■□□□□ 0.41
LINC01840-201ENST00000421870 CCDC171Q6TFL3 1326 aa17.63■□□□□ 0.41
LINC01840-201ENST00000421870 PLIN4Q96Q06 1357 aa17.63■□□□□ 0.41
LINC01840-201ENST00000421870 COL11A1P12107 1806 aaPredicted RBP17.63■□□□□ 0.41
LINC01840-201ENST00000421870 HIP1O00291 1037 aa17.62■□□□□ 0.41
LINC01840-201ENST00000421870 FLOT1O75955 427 aa17.62■□□□□ 0.41
LINC01840-201ENST00000421870 TTLL1O95922 423 aa17.62■□□□□ 0.41
LINC01840-201ENST00000421870 INHAP05111 366 aa17.62■□□□□ 0.41
LINC01840-201ENST00000421870 TSPY3P0CV98 308 aa17.62■□□□□ 0.41
LINC01840-201ENST00000421870 TSPY8P0CW00 308 aa17.62■□□□□ 0.41
LINC01840-201ENST00000421870 GJA8P48165 433 aa17.62■□□□□ 0.41
LINC01840-201ENST00000421870 NKX2-3Q8TAU0 364 aa17.62■□□□□ 0.41
LINC01840-201ENST00000421870 RNF208Q9H0X6 261 aa17.62■□□□□ 0.41
LINC01840-201ENST00000421870 INCENPQ9NQS7 918 aa17.62■□□□□ 0.41
LINC01840-201ENST00000421870 ZNFX1Q9P2E3 1918 aaKnown RBP17.62■□□□□ 0.41
LINC01840-201ENST00000421870 ORC4O43929 436 aa17.61■□□□□ 0.41
LINC01840-201ENST00000421870 CAPN2P17655 700 aa17.61■□□□□ 0.41
LINC01840-201ENST00000421870 CYP2B6P20813 491 aa17.61■□□□□ 0.41
LINC01840-201ENST00000421870 PTPREP23469 700 aa17.61■□□□□ 0.41
LINC01840-201ENST00000421870 NOVP48745 357 aa17.61■□□□□ 0.41
LINC01840-201ENST00000421870 MFAP1P55081 439 aaKnown RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms