RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 ASCC2Q9H1I8 757 aaPredicted RBP18.61■□□□□ 0.57
BRAT1-202ENST00000421712 RPAP3Q9H6T3 665 aaPredicted RBP18.61■□□□□ 0.57
BRAT1-202ENST00000421712 VCPKMTQ9H867 229 aa18.61■□□□□ 0.57
BRAT1-202ENST00000421712 STX8Q9UNK0 236 aa18.61■□□□□ 0.57
BRAT1-202ENST00000421712 NEDD4P46934 1319 aa18.6■□□□□ 0.57
BRAT1-202ENST00000421712 IGKV6D-41A0A0C4DH26 115 aa18.6■□□□□ 0.57
BRAT1-202ENST00000421712 B4E1Z4 1266 aa18.6■□□□□ 0.57
BRAT1-202ENST00000421712 NMT2O60551 498 aa18.6■□□□□ 0.57
BRAT1-202ENST00000421712 HOXA7P31268 230 aaPredicted RBP18.6■□□□□ 0.57
BRAT1-202ENST00000421712 SP3Q02447 781 aa18.6■□□□□ 0.57
BRAT1-202ENST00000421712 LPAR1Q92633 364 aa18.6■□□□□ 0.57
BRAT1-202ENST00000421712 KRT23Q9C075 422 aa18.6■□□□□ 0.57
BRAT1-202ENST00000421712 TANGO6Q9C0B7 1094 aa18.6■□□□□ 0.57
BRAT1-202ENST00000421712 CNNM2Q9H8M5 875 aa18.6■□□□□ 0.57
BRAT1-202ENST00000421712 ECM2O94769 699 aaPredicted RBP18.59■□□□□ 0.57
BRAT1-202ENST00000421712 CYP21A2P08686 494 aa18.59■□□□□ 0.57
BRAT1-202ENST00000421712 NOM1Q5C9Z4 860 aaKnown RBP18.59■□□□□ 0.57
BRAT1-202ENST00000421712 SAMD1Q6SPF0 538 aaPredicted RBP18.59■□□□□ 0.57
BRAT1-202ENST00000421712 LRRC47Q8N1G4 583 aaKnown RBP18.59■□□□□ 0.57
BRAT1-202ENST00000421712 P2RX7Q99572 595 aaKnown RBP18.59■□□□□ 0.57
BRAT1-202ENST00000421712 ISY1Q9ULR0 285 aaKnown RBP18.59■□□□□ 0.57
BRAT1-202ENST00000421712 LOC285556D6RIA3 1793 aa18.58■□□□□ 0.57
BRAT1-202ENST00000421712 PLIN4Q96Q06 1357 aa18.58■□□□□ 0.57
BRAT1-202ENST00000421712 KDM4AO75164 1064 aa18.58■□□□□ 0.56
BRAT1-202ENST00000421712 KIF22Q14807 665 aa18.58■□□□□ 0.56
BRAT1-202ENST00000421712 KIAA1755Q5JYT7 1200 aa18.58■□□□□ 0.56
BRAT1-202ENST00000421712 C17orf99Q6UX52 265 aa18.58■□□□□ 0.56
BRAT1-202ENST00000421712 CATSPERGQ6ZRH7 1159 aa18.58■□□□□ 0.56
BRAT1-202ENST00000421712 IQCA1Q86XH1 822 aa18.58■□□□□ 0.56
BRAT1-202ENST00000421712 ANKRD13CQ8N6S4 541 aa18.58■□□□□ 0.56
BRAT1-202ENST00000421712 CHMP4CQ96CF2 233 aa18.58■□□□□ 0.56
BRAT1-202ENST00000421712 ERO1AQ96HE7 468 aa18.58■□□□□ 0.56
BRAT1-202ENST00000421712 ZKSCAN3Q9BRR0 538 aa18.58■□□□□ 0.56
BRAT1-202ENST00000421712 IL17RBQ9NRM6 502 aa18.58■□□□□ 0.56
BRAT1-202ENST00000421712 MTMR7Q9Y216 660 aa18.58■□□□□ 0.56
BRAT1-202ENST00000421712 F5H6K3 240 aa18.57■□□□□ 0.56
BRAT1-202ENST00000421712 GCLCP48506 637 aaPredicted RBP18.57■□□□□ 0.56
BRAT1-202ENST00000421712 KLRC3Q07444 240 aa18.57■□□□□ 0.56
BRAT1-202ENST00000421712 RALYLQ86SE5 291 aaKnown RBP18.57■□□□□ 0.56
BRAT1-202ENST00000421712 CD99L2Q8TCZ2 262 aa18.57■□□□□ 0.56
BRAT1-202ENST00000421712 MKL1Q969V6 931 aa18.57■□□□□ 0.56
BRAT1-202ENST00000421712 ZSWIM5Q9P217 1185 aa18.57■□□□□ 0.56
BRAT1-202ENST00000421712 LAMA4Q16363 1823 aa18.57■□□□□ 0.56
BRAT1-202ENST00000421712 MYH4Q9Y623 1939 aa18.57■□□□□ 0.56
BRAT1-202ENST00000421712 E7EWF7 191 aa18.56■□□□□ 0.56
BRAT1-202ENST00000421712 WDR46O15213 610 aaKnown RBP18.56■□□□□ 0.56
BRAT1-202ENST00000421712 REC8O95072 547 aa18.56■□□□□ 0.56
BRAT1-202ENST00000421712 NDUFB10O96000 172 aa18.56■□□□□ 0.56
BRAT1-202ENST00000421712 NT5C2P49902 561 aa18.56■□□□□ 0.56
BRAT1-202ENST00000421712 HERVK_113P62684 666 aa18.56■□□□□ 0.56
BRAT1-202ENST00000421712 ARHGEF6Q15052 776 aa18.56■□□□□ 0.56
BRAT1-202ENST00000421712 COL13A1Q5TAT6 717 aaPredicted RBP18.56■□□□□ 0.56
BRAT1-202ENST00000421712 RNF20Q5VTR2 975 aa18.56■□□□□ 0.56
BRAT1-202ENST00000421712 CREB3L3Q68CJ9 461 aa18.56■□□□□ 0.56
BRAT1-202ENST00000421712 UBAC1Q9BSL1 405 aa18.56■□□□□ 0.56
BRAT1-202ENST00000421712 TCP11L1Q9NUJ3 509 aa18.56■□□□□ 0.56
BRAT1-202ENST00000421712 GREB1LQ9C091 1923 aaPredicted RBP18.56■□□□□ 0.56
BRAT1-202ENST00000421712 SLC27A2O14975 620 aa18.55■□□□□ 0.56
BRAT1-202ENST00000421712 FLOT1O75955 427 aa18.55■□□□□ 0.56
BRAT1-202ENST00000421712 COG2Q14746 738 aa18.55■□□□□ 0.56
BRAT1-202ENST00000421712 CCDC178Q5BJE1 867 aa18.55■□□□□ 0.56
BRAT1-202ENST00000421712 FAM83BQ5T0W9 1011 aa18.55■□□□□ 0.56
BRAT1-202ENST00000421712 SLFN13Q68D06 897 aa18.55■□□□□ 0.56
BRAT1-202ENST00000421712 NCOA7Q8NI08 942 aa18.55■□□□□ 0.56
BRAT1-202ENST00000421712 NKX2-3Q8TAU0 364 aa18.55■□□□□ 0.56
BRAT1-202ENST00000421712 NUP88Q99567 741 aaPredicted RBP18.55■□□□□ 0.56
BRAT1-202ENST00000421712 PAGR1Q9BTK6 254 aa18.55■□□□□ 0.56
BRAT1-202ENST00000421712 HOXC10Q9NYD6 342 aa18.55■□□□□ 0.56
BRAT1-202ENST00000421712 GTF3C3Q9Y5Q9 886 aa18.55■□□□□ 0.56
BRAT1-202ENST00000421712 ADGRA2Q96PE1 1338 aa18.54■□□□□ 0.56
BRAT1-202ENST00000421712 TOP1P11387 765 aaKnown RBP18.54■□□□□ 0.56
BRAT1-202ENST00000421712 NECTIN1Q15223 517 aa18.54■□□□□ 0.56
BRAT1-202ENST00000421712 GTF3C2Q8WUA4 911 aaPredicted RBP18.54■□□□□ 0.56
BRAT1-202ENST00000421712 TTC14Q96N46 770 aa18.54■□□□□ 0.56
BRAT1-202ENST00000421712 SYNPO2Q9UMS6 1093 aa18.54■□□□□ 0.56
BRAT1-202ENST00000421712 TAF6LQ9Y6J9 622 aa18.54■□□□□ 0.56
BRAT1-202ENST00000421712 FMNL1O95466 1100 aaPredicted RBP18.53■□□□□ 0.56
BRAT1-202ENST00000421712 BCRP11274 1271 aa18.53■□□□□ 0.56
BRAT1-202ENST00000421712 MCCP23508 829 aa18.53■□□□□ 0.56
BRAT1-202ENST00000421712 LACTBP83111 547 aaPredicted RBP18.53■□□□□ 0.56
BRAT1-202ENST00000421712 CTU1Q7Z7A3 348 aaKnown RBP18.53■□□□□ 0.56
BRAT1-202ENST00000421712 CCAR1Q8IX12 1150 aaKnown RBP18.53■□□□□ 0.56
BRAT1-202ENST00000421712 GMCL1P1Q8NEA9 526 aa18.53■□□□□ 0.56
BRAT1-202ENST00000421712 GPRC5AQ8NFJ5 357 aa18.53■□□□□ 0.56
BRAT1-202ENST00000421712 ZSCAN10Q96SZ4 725 aaPredicted RBP18.53■□□□□ 0.56
BRAT1-202ENST00000421712 TMEM47Q9BQJ4 181 aa18.53■□□□□ 0.56
BRAT1-202ENST00000421712 EFCC1Q9HA90 598 aa18.53■□□□□ 0.56
BRAT1-202ENST00000421712 TRIM17Q9Y577 477 aa18.53■□□□□ 0.56
BRAT1-202ENST00000421712 ERICH2A1L162 156 aa18.52■□□□□ 0.56
BRAT1-202ENST00000421712 ZKSCAN1P17029 563 aaPredicted RBP18.52■□□□□ 0.56
BRAT1-202ENST00000421712 SLC1A4P43007 532 aa18.52■□□□□ 0.56
BRAT1-202ENST00000421712 PSMC4P43686 418 aa18.52■□□□□ 0.56
BRAT1-202ENST00000421712 IKQ13123 557 aaPredicted RBP18.52■□□□□ 0.56
BRAT1-202ENST00000421712 FAM110CQ1W6H9 321 aa18.52■□□□□ 0.56
BRAT1-202ENST00000421712 STOX1Q6ZVD7 989 aa18.52■□□□□ 0.56
BRAT1-202ENST00000421712 CYB5R4Q7L1T6 521 aa18.52■□□□□ 0.56
BRAT1-202ENST00000421712 DGKHQ86XP1 1220 aa18.52■□□□□ 0.56
BRAT1-202ENST00000421712 TNKSO95271 1327 aa18.51■□□□□ 0.55
BRAT1-202ENST00000421712 IFIT3O14879 490 aaKnown RBP18.51■□□□□ 0.55
BRAT1-202ENST00000421712 PEX10O60683 326 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms