RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 CHD4Q14839 1912 aa12.03□□□□□ -0.48
PTCH1-206ENST00000421141 FBXO41Q8TF61 875 aa12.03□□□□□ -0.48
PTCH1-206ENST00000421141 EDC3Q96F86 508 aaKnown RBP12.03□□□□□ -0.48
PTCH1-206ENST00000421141 VPS54Q9P1Q0 977 aa12.03□□□□□ -0.48
PTCH1-206ENST00000421141 A0A0G2JLW4 131 aa12.03□□□□□ -0.48
PTCH1-206ENST00000421141 EIF3JO75822 258 aaKnown RBP12.03□□□□□ -0.48
PTCH1-206ENST00000421141 GCNT3O95395 438 aa12.03□□□□□ -0.48
PTCH1-206ENST00000421141 FMNL1O95466 1100 aaPredicted RBP12.03□□□□□ -0.48
PTCH1-206ENST00000421141 CCND2P30279 289 aa12.03□□□□□ -0.48
PTCH1-206ENST00000421141 ADD2P35612 726 aa12.03□□□□□ -0.48
PTCH1-206ENST00000421141 COA7Q96BR5 231 aa12.03□□□□□ -0.48
PTCH1-206ENST00000421141 STX10O60499 249 aa12.02□□□□□ -0.48
PTCH1-206ENST00000421141 KRT5P13647 590 aa12.02□□□□□ -0.48
PTCH1-206ENST00000421141 P4HA1P13674 534 aa12.02□□□□□ -0.48
PTCH1-206ENST00000421141 ZNF341Q9BYN7 854 aa12.02□□□□□ -0.48
PTCH1-206ENST00000421141 DDX25Q9UHL0 483 aaKnown RBP12.02□□□□□ -0.48
PTCH1-206ENST00000421141 PCDHA1Q9Y5I3 950 aa12.02□□□□□ -0.48
PTCH1-206ENST00000421141 ZMYM6O95789 1325 aa12.02□□□□□ -0.48
PTCH1-206ENST00000421141 CDHR2Q9BYE9 1310 aa12.02□□□□□ -0.48
PTCH1-206ENST00000421141 CYLC1P35663 651 aaPredicted RBP12.02□□□□□ -0.48
PTCH1-206ENST00000421141 FOXP4Q8IVH2 680 aaPredicted RBP12.02□□□□□ -0.48
PTCH1-206ENST00000421141 NEURL4Q96JN8 1562 aa12.02□□□□□ -0.49
PTCH1-206ENST00000421141 TNKSO95271 1327 aa12.02□□□□□ -0.49
PTCH1-206ENST00000421141 DNA2P51530 1060 aa12.02□□□□□ -0.49
PTCH1-206ENST00000421141 NFIXQ14938 502 aa12.02□□□□□ -0.49
PTCH1-206ENST00000421141 CDHR1Q96JP9 859 aa12.02□□□□□ -0.49
PTCH1-206ENST00000421141 DBNLQ9UJU6 430 aaKnown RBP12.02□□□□□ -0.49
PTCH1-206ENST00000421141 SLIT1O75093 1534 aa12.02□□□□□ -0.49
PTCH1-206ENST00000421141 AKR1B10O60218 316 aa12.02□□□□□ -0.49
PTCH1-206ENST00000421141 ZBTB8OSQ8IWT0 167 aa12.02□□□□□ -0.49
PTCH1-206ENST00000421141 BMP3P12645 472 aa12.02□□□□□ -0.49
PTCH1-206ENST00000421141 NT5C2P49902 561 aa12.02□□□□□ -0.49
PTCH1-206ENST00000421141 PRR16Q569H4 304 aa12.02□□□□□ -0.49
PTCH1-206ENST00000421141 FAM193BQ96PV7 902 aaPredicted RBP12.02□□□□□ -0.49
PTCH1-206ENST00000421141 ZNF215Q9UL58 517 aaPredicted RBP12.02□□□□□ -0.49
PTCH1-206ENST00000421141 RABGAP1Q9Y3P9 1069 aa12.02□□□□□ -0.49
PTCH1-206ENST00000421141 DMP1Q13316 513 aaPredicted RBP12.01□□□□□ -0.49
PTCH1-206ENST00000421141 PTPN14Q15678 1187 aa12.01□□□□□ -0.49
PTCH1-206ENST00000421141 TAX1BP1Q86VP1 789 aa12.01□□□□□ -0.49
PTCH1-206ENST00000421141 CPDO75976 1380 aa12.01□□□□□ -0.49
PTCH1-206ENST00000421141 GDF11O95390 407 aa12.01□□□□□ -0.49
PTCH1-206ENST00000421141 KIF4BQ2VIQ3 1234 aa12.01□□□□□ -0.49
PTCH1-206ENST00000421141 MAP9Q49MG5 647 aa12.01□□□□□ -0.49
PTCH1-206ENST00000421141 ANO1Q5XXA6 986 aa12.01□□□□□ -0.49
PTCH1-206ENST00000421141 EXOC8Q8IYI6 725 aa12.01□□□□□ -0.49
PTCH1-206ENST00000421141 DEPTORQ8TB45 409 aa12.01□□□□□ -0.49
PTCH1-206ENST00000421141 TEKT3Q9BXF9 490 aa12.01□□□□□ -0.49
PTCH1-206ENST00000421141 PCDHA12Q9UN75 941 aa12.01□□□□□ -0.49
PTCH1-206ENST00000421141 ADCY9O60503 1353 aa12.01□□□□□ -0.49
PTCH1-206ENST00000421141 A0A0D9SFI3 127 aa12.01□□□□□ -0.49
PTCH1-206ENST00000421141 KCTD1Q719H9 257 aa12.01□□□□□ -0.49
PTCH1-206ENST00000421141 LRWD1Q9UFC0 647 aa12.01□□□□□ -0.49
PTCH1-206ENST00000421141 GOLGA6L10A0A0M3HER8 536 aa12.01□□□□□ -0.49
PTCH1-206ENST00000421141 H0YCG3 227 aa12.01□□□□□ -0.49
PTCH1-206ENST00000421141 TRAF5O00463 557 aa12.01□□□□□ -0.49
PTCH1-206ENST00000421141 SMC1AQ14683 1233 aaKnown RBP12.01□□□□□ -0.49
PTCH1-206ENST00000421141 CCDC91Q7Z6B0 441 aa12.01□□□□□ -0.49
PTCH1-206ENST00000421141 DIS3L2Q8IYB7 885 aaKnown RBP12.01□□□□□ -0.49
PTCH1-206ENST00000421141 ZNF274Q96GC6 653 aaPredicted RBP12.01□□□□□ -0.49
PTCH1-206ENST00000421141 ADPGKQ9BRR6 497 aa12.01□□□□□ -0.49
PTCH1-206ENST00000421141 SUGT1Q9Y2Z0 365 aa12.01□□□□□ -0.49
PTCH1-206ENST00000421141 FOSP01100 380 aaPredicted RBP12.01□□□□□ -0.49
PTCH1-206ENST00000421141 POLA2Q14181 598 aa12.01□□□□□ -0.49
PTCH1-206ENST00000421141 FMN2Q9NZ56 1722 aa12.01□□□□□ -0.49
PTCH1-206ENST00000421141 POLR2DO15514 142 aaKnown RBP12.01□□□□□ -0.49
PTCH1-206ENST00000421141 POLGP54098 1239 aaPredicted RBP12.01□□□□□ -0.49
PTCH1-206ENST00000421141 ANO6Q4KMQ2 910 aa12.01□□□□□ -0.49
PTCH1-206ENST00000421141 ZNF853P0CG23 659 aa12□□□□□ -0.49
PTCH1-206ENST00000421141 CPA1P15085 419 aa12□□□□□ -0.49
PTCH1-206ENST00000421141 CHRNA5P30532 468 aa12□□□□□ -0.49
PTCH1-206ENST00000421141 UBXN1Q04323 297 aa12□□□□□ -0.49
PTCH1-206ENST00000421141 BLIDQ8IZY5 108 aa12□□□□□ -0.49
PTCH1-206ENST00000421141 POTEB2H3BUK9 544 aa12□□□□□ -0.49
PTCH1-206ENST00000421141 DDX12PQ92771 950 aa12□□□□□ -0.49
PTCH1-206ENST00000421141 MRPS9P82933 396 aaKnown RBP12□□□□□ -0.49
PTCH1-206ENST00000421141 EZH2Q15910 746 aaKnown RBP12□□□□□ -0.49
PTCH1-206ENST00000421141 WRNIP1Q96S55 665 aa12□□□□□ -0.49
PTCH1-206ENST00000421141 PTPRUQ92729 1446 aa12□□□□□ -0.49
PTCH1-206ENST00000421141 GIMAP6Q6P9H5 292 aa12□□□□□ -0.49
PTCH1-206ENST00000421141 FAM160B2Q86V87 743 aa12□□□□□ -0.49
PTCH1-206ENST00000421141 MARCH10Q8NA82 808 aaPredicted RBP12□□□□□ -0.49
PTCH1-206ENST00000421141 CRAMP1Q96RY5 1269 aa12□□□□□ -0.49
PTCH1-206ENST00000421141 SELENOOQ9BVL4 669 aa12□□□□□ -0.49
PTCH1-206ENST00000421141 HAUS2Q9NVX0 235 aa12□□□□□ -0.49
PTCH1-206ENST00000421141 DACT1Q9NYF0 836 aa12□□□□□ -0.49
PTCH1-206ENST00000421141 ANKRD26Q9UPS8 1709 aa12□□□□□ -0.49
PTCH1-206ENST00000421141 CUTAO60888 179 aa12□□□□□ -0.49
PTCH1-206ENST00000421141 ARID5AQ03989 594 aa12□□□□□ -0.49
PTCH1-206ENST00000421141 SEPT14Q6ZU15 432 aa12□□□□□ -0.49
PTCH1-206ENST00000421141 TMEM179Q6ZVK1 233 aa12□□□□□ -0.49
PTCH1-206ENST00000421141 ABI1Q8IZP0 508 aa12□□□□□ -0.49
PTCH1-206ENST00000421141 FANCBQ8NB91 859 aa12□□□□□ -0.49
PTCH1-206ENST00000421141 RETREG2Q8NC44 543 aa12□□□□□ -0.49
PTCH1-206ENST00000421141 KIF18AQ8NI77 898 aa12□□□□□ -0.49
PTCH1-206ENST00000421141 MAK16Q9BXY0 300 aaKnown RBP12□□□□□ -0.49
PTCH1-206ENST00000421141 HACL1Q9UJ83 578 aa12□□□□□ -0.49
PTCH1-206ENST00000421141 RPAP1Q9BWH6 1393 aaPredicted RBP12□□□□□ -0.49
PTCH1-206ENST00000421141 hCG_1642624A0A1W2PR95 340 aa12□□□□□ -0.49
PTCH1-206ENST00000421141 STYK1Q6J9G0 422 aa12□□□□□ -0.49
PTCH1-206ENST00000421141 GPBP1L1Q9HC44 474 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms