RNA–Protein interactions for RNA: ENST00000420058.1

NFE4-201, Transcript of nuclear factor, erythroid 4, humanhuman

TSL 1 (best)

Gene NFE4, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4-201ENST00000420058 SLC39A5Q6ZMH5 540 aa17.34■□□□□ 0.37
NFE4-201ENST00000420058 CERS3Q8IU89 383 aa17.34■□□□□ 0.37
NFE4-201ENST00000420058 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.34■□□□□ 0.37
NFE4-201ENST00000420058 LBHD1Q9BQE6 289 aaPredicted RBP17.34■□□□□ 0.37
NFE4-201ENST00000420058 RLFQ13129 1914 aa17.33■□□□□ 0.37
NFE4-201ENST00000420058 MUC3AQ02505 3323 aa17.33■□□□□ 0.37
NFE4-201ENST00000420058 ADORA2AP29274 412 aa17.33■□□□□ 0.36
NFE4-201ENST00000420058 ANO1Q5XXA6 986 aa17.33■□□□□ 0.36
NFE4-201ENST00000420058 CABP5Q9NP86 173 aa17.33■□□□□ 0.36
NFE4-201ENST00000420058 HOXC10Q9NYD6 342 aa17.33■□□□□ 0.36
NFE4-201ENST00000420058 IVNS1ABPQ9Y6Y0 642 aa17.33■□□□□ 0.36
NFE4-201ENST00000420058 STRNO43815 780 aa17.32■□□□□ 0.36
NFE4-201ENST00000420058 ERCC3P19447 782 aa17.32■□□□□ 0.36
NFE4-201ENST00000420058 MAP3K12Q12852 859 aa17.32■□□□□ 0.36
NFE4-201ENST00000420058 SNX17Q15036 470 aa17.32■□□□□ 0.36
NFE4-201ENST00000420058 PRAMEF19Q5SWL8 479 aa17.32■□□□□ 0.36
NFE4-201ENST00000420058 TMED8Q6PL24 325 aaPredicted RBP17.32■□□□□ 0.36
NFE4-201ENST00000420058 SH3RF1Q7Z6J0 888 aa17.32■□□□□ 0.36
NFE4-201ENST00000420058 SPATC1LQ9H0A9 340 aa17.32■□□□□ 0.36
NFE4-201ENST00000420058 SEMA6BQ9H3T3 888 aa17.32■□□□□ 0.36
NFE4-201ENST00000420058 TRIM43BA6NCK2 446 aa17.31■□□□□ 0.36
NFE4-201ENST00000420058 DPP9Q86TI2 863 aa17.31■□□□□ 0.36
NFE4-201ENST00000420058 ARRDC4Q8NCT1 418 aa17.31■□□□□ 0.36
NFE4-201ENST00000420058 SHCBP1Q8NEM2 672 aa17.31■□□□□ 0.36
NFE4-201ENST00000420058 TRIM43Q96BQ3 446 aaPredicted RBP17.31■□□□□ 0.36
NFE4-201ENST00000420058 CDX2Q99626 313 aaPredicted RBP17.31■□□□□ 0.36
NFE4-201ENST00000420058 ATP11BQ9Y2G3 1177 aa17.31■□□□□ 0.36
NFE4-201ENST00000420058 SMCHD1A6NHR9 2005 aa17.3■□□□□ 0.36
NFE4-201ENST00000420058 TCRBV5S4A2TA0A5A2 114 aa17.3■□□□□ 0.36
NFE4-201ENST00000420058 CCER2I3L3R5 266 aa17.3■□□□□ 0.36
NFE4-201ENST00000420058 SMIM22K7EJ46 135 aa17.3■□□□□ 0.36
NFE4-201ENST00000420058 SEPT4O43236 478 aa17.3■□□□□ 0.36
NFE4-201ENST00000420058 POLR3DP05423 398 aaPredicted RBP17.3■□□□□ 0.36
NFE4-201ENST00000420058 CYP2D6P10635 497 aa17.3■□□□□ 0.36
NFE4-201ENST00000420058 DSG3P32926 999 aa17.3■□□□□ 0.36
NFE4-201ENST00000420058 CEP85Q6P2H3 762 aa17.3■□□□□ 0.36
NFE4-201ENST00000420058 SLC44A5Q8NCS7 719 aa17.3■□□□□ 0.36
NFE4-201ENST00000420058 BADQ92934 168 aa17.3■□□□□ 0.36
NFE4-201ENST00000420058 TTYH1Q9H313 450 aaPredicted RBP17.3■□□□□ 0.36
NFE4-201ENST00000420058 LTBP2Q14767 1821 aa17.29■□□□□ 0.36
NFE4-201ENST00000420058 MAGEB6P1A0A0J9YX57 407 aa17.29■□□□□ 0.36
NFE4-201ENST00000420058 PDE6AP16499 860 aa17.29■□□□□ 0.36
NFE4-201ENST00000420058 ITGB8P26012 769 aa17.29■□□□□ 0.36
NFE4-201ENST00000420058 ADCYAP1R1P41586 468 aa17.29■□□□□ 0.36
NFE4-201ENST00000420058 LRRC41Q15345 812 aa17.29■□□□□ 0.36
NFE4-201ENST00000420058 TRIM60Q495X7 471 aa17.29■□□□□ 0.36
NFE4-201ENST00000420058 C1orf53Q5VUE5 145 aa17.29■□□□□ 0.36
NFE4-201ENST00000420058 AACSQ86V21 672 aa17.29■□□□□ 0.36
NFE4-201ENST00000420058 DCP1AQ9NPI6 582 aaPredicted RBP17.29■□□□□ 0.36
NFE4-201ENST00000420058 PDLIM7Q9NR12 457 aa17.29■□□□□ 0.36
NFE4-201ENST00000420058 MCM9Q9NXL9 1143 aa17.29■□□□□ 0.36
NFE4-201ENST00000420058 EXOC6BQ9Y2D4 811 aa17.29■□□□□ 0.36
NFE4-201ENST00000420058 CHD9Q3L8U1 2897 aa17.29■□□□□ 0.36
NFE4-201ENST00000420058 SLC9C2Q5TAH2 1124 aa17.28■□□□□ 0.36
NFE4-201ENST00000420058 ZNF697Q5TEC3 545 aa17.28■□□□□ 0.36
NFE4-201ENST00000420058 CLEC10AQ8IUN9 316 aa17.28■□□□□ 0.36
NFE4-201ENST00000420058 ABRAQ8N0Z2 381 aa17.28■□□□□ 0.36
NFE4-201ENST00000420058 SDR42E1Q8WUS8 393 aa17.28■□□□□ 0.36
NFE4-201ENST00000420058 FERMT2Q96AC1 680 aa17.28■□□□□ 0.36
NFE4-201ENST00000420058 ATG4CQ96DT6 458 aa17.28■□□□□ 0.36
NFE4-201ENST00000420058 DYNLL2Q96FJ2 89 aa17.28■□□□□ 0.36
NFE4-201ENST00000420058 PRKAG2Q9UGJ0 569 aa17.28■□□□□ 0.36
NFE4-201ENST00000420058 ADAMTS5Q9UNA0 930 aa17.28■□□□□ 0.36
NFE4-201ENST00000420058 ZNF236Q9UL36 1845 aa17.27■□□□□ 0.36
NFE4-201ENST00000420058 EPHB4P54760 987 aa17.27■□□□□ 0.36
NFE4-201ENST00000420058 TLE2Q04725 743 aa17.27■□□□□ 0.36
NFE4-201ENST00000420058 SLFNL1Q499Z3 407 aa17.27■□□□□ 0.36
NFE4-201ENST00000420058 FAM47AQ5JRC9 791 aa17.27■□□□□ 0.36
NFE4-201ENST00000420058 LCORLQ8N3X6 602 aa17.27■□□□□ 0.36
NFE4-201ENST00000420058 MAML3Q96JK9 1138 aa17.27■□□□□ 0.36
NFE4-201ENST00000420058 TANGO6Q9C0B7 1094 aa17.27■□□□□ 0.36
NFE4-201ENST00000420058 MROH8Q9H579 483 aa17.27■□□□□ 0.36
NFE4-201ENST00000420058 TMX2Q9Y320 296 aa17.27■□□□□ 0.36
NFE4-201ENST00000420058 ZNF532Q9HCE3 1301 aa17.26■□□□□ 0.35
NFE4-201ENST00000420058 KBTBD13C9JR72 458 aa17.26■□□□□ 0.35
NFE4-201ENST00000420058 MPHOSPH10O00566 681 aaKnown RBP17.26■□□□□ 0.35
NFE4-201ENST00000420058 PRKAB2O43741 272 aa17.26■□□□□ 0.35
NFE4-201ENST00000420058 AKR1B1P15121 316 aa17.26■□□□□ 0.35
NFE4-201ENST00000420058 TMEM132BQ14DG7 1078 aa17.26■□□□□ 0.35
NFE4-201ENST00000420058 TMEM179Q6ZVK1 233 aa17.26■□□□□ 0.35
NFE4-201ENST00000420058 ITPRIPQ8IWB1 547 aa17.26■□□□□ 0.35
NFE4-201ENST00000420058 SPICE1Q8N0Z3 855 aa17.26■□□□□ 0.35
NFE4-201ENST00000420058 MB21D1Q8N884 522 aa17.26■□□□□ 0.35
NFE4-201ENST00000420058 CRNKL1Q9BZJ0 848 aaKnown RBP17.26■□□□□ 0.35
NFE4-201ENST00000420058 IL1RAPL2Q9NP60 686 aa17.26■□□□□ 0.35
NFE4-201ENST00000420058 A0A0G2JMZ2 1700 aa17.25■□□□□ 0.35
NFE4-201ENST00000420058 TAL1P17542 331 aaPredicted RBP17.25■□□□□ 0.35
NFE4-201ENST00000420058 SMAD3P84022 425 aaKnown RBP17.25■□□□□ 0.35
NFE4-201ENST00000420058 NCAPG2Q86XI2 1143 aa17.25■□□□□ 0.35
NFE4-201ENST00000420058 RHPN1Q8TCX5 695 aa17.25■□□□□ 0.35
NFE4-201ENST00000420058 PRDM5Q9NQX1 630 aaPredicted RBP17.25■□□□□ 0.35
NFE4-201ENST00000420058 PHF24Q9UPV7 400 aa17.25■□□□□ 0.35
NFE4-201ENST00000420058 ZNFX1Q9P2E3 1918 aaKnown RBP17.24■□□□□ 0.35
NFE4-201ENST00000420058 FLOT1O75955 427 aa17.24■□□□□ 0.35
NFE4-201ENST00000420058 PLS1Q14651 629 aa17.24■□□□□ 0.35
NFE4-201ENST00000420058 TTF1Q15361 905 aaPredicted RBP17.24■□□□□ 0.35
NFE4-201ENST00000420058 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.24■□□□□ 0.35
NFE4-201ENST00000420058 MYLIPQ8WY64 445 aa17.24■□□□□ 0.35
NFE4-201ENST00000420058 VCPKMTQ9H867 229 aa17.24■□□□□ 0.35
NFE4-201ENST00000420058 CYP2D7A0A087X1C5 515 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms