RNA–Protein interactions for RNA: ENST00000419533.1

UBR4-206, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 5,583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-206ENST00000419533 KRT5P13647 590 aa9.45□□□□□ -0.9
UBR4-206ENST00000419533 TGFB2P61812 414 aa9.45□□□□□ -0.9
UBR4-206ENST00000419533 PLCB3Q01970 1234 aa9.45□□□□□ -0.9
UBR4-206ENST00000419533 RAPGEF1Q13905 1077 aa9.45□□□□□ -0.9
UBR4-206ENST00000419533 CALCRLQ16602 461 aa9.45□□□□□ -0.9
UBR4-206ENST00000419533 SNX29Q8TEQ0 813 aa9.45□□□□□ -0.9
UBR4-206ENST00000419533 LUC7L2Q9Y383 392 aaKnown RBP9.45□□□□□ -0.9
UBR4-206ENST00000419533 TCP10L2B9ZVM9 353 aa9.44□□□□□ -0.9
UBR4-206ENST00000419533 GYG1P46976 350 aa9.44□□□□□ -0.9
UBR4-206ENST00000419533 MICALCLQ6ZW33 695 aa9.44□□□□□ -0.9
UBR4-206ENST00000419533 IQCGQ9H095 443 aaKnown RBP9.44□□□□□ -0.9
UBR4-206ENST00000419533 HSF2BPO75031 334 aa9.44□□□□□ -0.9
UBR4-206ENST00000419533 CIAPIN1Q6FI81 312 aa9.44□□□□□ -0.9
UBR4-206ENST00000419533 OTUD6AQ7L8S5 288 aa9.44□□□□□ -0.9
UBR4-206ENST00000419533 NLRP10Q86W26 655 aa9.44□□□□□ -0.9
UBR4-206ENST00000419533 KIAA0825Q8IV33 1275 aa9.44□□□□□ -0.9
UBR4-206ENST00000419533 PLCD3Q8N3E9 789 aa9.44□□□□□ -0.9
UBR4-206ENST00000419533 MRPL11Q9Y3B7 192 aaKnown RBP9.44□□□□□ -0.9
UBR4-206ENST00000419533 ATP6V0A2Q9Y487 856 aa9.44□□□□□ -0.9
UBR4-206ENST00000419533 BTDP43251 543 aa9.44□□□□□ -0.9
UBR4-206ENST00000419533 CERKLQ49MI3 558 aaPredicted RBP9.44□□□□□ -0.9
UBR4-206ENST00000419533 MCF2L2Q86YR7 1114 aa9.44□□□□□ -0.9
UBR4-206ENST00000419533 REXO1Q8N1G1 1221 aaKnown RBP9.44□□□□□ -0.9
UBR4-206ENST00000419533 OTUD7AQ8TE49 926 aaPredicted RBP9.44□□□□□ -0.9
UBR4-206ENST00000419533 NOX5Q96PH1 765 aa9.44□□□□□ -0.9
UBR4-206ENST00000419533 PAGR1Q9BTK6 254 aa9.44□□□□□ -0.9
UBR4-206ENST00000419533 MAK16Q9BXY0 300 aaKnown RBP9.44□□□□□ -0.9
UBR4-206ENST00000419533 GINS2Q9Y248 185 aa9.44□□□□□ -0.9
UBR4-206ENST00000419533 CETN3O15182 167 aa9.44□□□□□ -0.9
UBR4-206ENST00000419533 CPA1P15085 419 aa9.44□□□□□ -0.9
UBR4-206ENST00000419533 PLCD4Q9BRC7 762 aa9.44□□□□□ -0.9
UBR4-206ENST00000419533 NOC4LQ9BVI4 516 aaKnown RBP9.44□□□□□ -0.9
UBR4-206ENST00000419533 TSGA10Q9BZW7 698 aa9.44□□□□□ -0.9
UBR4-206ENST00000419533 A0A1W2PRG0 241 aa9.43□□□□□ -0.9
UBR4-206ENST00000419533 USP17L12C9JPN9 530 aa9.43□□□□□ -0.9
UBR4-206ENST00000419533 USP17L21D6R901 530 aa9.43□□□□□ -0.9
UBR4-206ENST00000419533 C21orf2O43822 256 aa9.43□□□□□ -0.9
UBR4-206ENST00000419533 NFIXQ14938 502 aa9.43□□□□□ -0.9
UBR4-206ENST00000419533 FAM47AQ5JRC9 791 aa9.43□□□□□ -0.9
UBR4-206ENST00000419533 GADL1Q6ZQY3 521 aa9.43□□□□□ -0.9
UBR4-206ENST00000419533 KIAA1524Q8TCG1 905 aa9.43□□□□□ -0.9
UBR4-206ENST00000419533 KCNH3Q9ULD8 1083 aa9.43□□□□□ -0.9
UBR4-206ENST00000419533 MYL5Q02045 173 aa9.43□□□□□ -0.9
UBR4-206ENST00000419533 CNGA4Q8IV77 575 aa9.43□□□□□ -0.9
UBR4-206ENST00000419533 CTNND2Q9UQB3 1225 aa9.43□□□□□ -0.9
UBR4-206ENST00000419533 CTAGE9A4FU28 777 aa9.43□□□□□ -0.9
UBR4-206ENST00000419533 BCAMP50895 628 aa9.43□□□□□ -0.9
UBR4-206ENST00000419533 SCNN1DP51172 638 aa9.43□□□□□ -0.9
UBR4-206ENST00000419533 CCDC14Q49A88 953 aa9.43□□□□□ -0.9
UBR4-206ENST00000419533 BEND3Q5T5X7 828 aa9.43□□□□□ -0.9
UBR4-206ENST00000419533 ARHGEF16Q5VV41 709 aa9.43□□□□□ -0.9
UBR4-206ENST00000419533 TBC1D9BQ66K14 1250 aa9.43□□□□□ -0.9
UBR4-206ENST00000419533 SSH3Q8TE77 659 aa9.43□□□□□ -0.9
UBR4-206ENST00000419533 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.43□□□□□ -0.9
UBR4-206ENST00000419533 ZSCAN10Q96SZ4 725 aaPredicted RBP9.43□□□□□ -0.9
UBR4-206ENST00000419533 STMN4Q9H169 189 aaPredicted RBP9.43□□□□□ -0.9
UBR4-206ENST00000419533 ATRNO75882 1429 aa9.43□□□□□ -0.9
UBR4-206ENST00000419533 A0A1B0GVL5 298 aa9.42□□□□□ -0.9
UBR4-206ENST00000419533 E7EWF7 191 aa9.42□□□□□ -0.9
UBR4-206ENST00000419533 CIAO1O76071 339 aa9.42□□□□□ -0.9
UBR4-206ENST00000419533 PCP11498 1178 aaKnown RBP9.42□□□□□ -0.9
UBR4-206ENST00000419533 TRIM14Q14142 442 aa9.42□□□□□ -0.9
UBR4-206ENST00000419533 HS1BP3Q53T59 392 aa9.42□□□□□ -0.9
UBR4-206ENST00000419533 SPECC1LQ69YQ0 1117 aa9.42□□□□□ -0.9
UBR4-206ENST00000419533 NT5C3AQ9H0P0 336 aa9.42□□□□□ -0.9
UBR4-206ENST00000419533 MLXIPQ9HAP2 919 aa9.42□□□□□ -0.9
UBR4-206ENST00000419533 NCOA5Q9HCD5 579 aaKnown RBP9.42□□□□□ -0.9
UBR4-206ENST00000419533 NALCNQ8IZF0 1738 aa9.42□□□□□ -0.9
UBR4-206ENST00000419533 KIF20BQ96Q89 1820 aa9.42□□□□□ -0.9
UBR4-206ENST00000419533 ABCC4O15439 1325 aa9.42□□□□□ -0.9
UBR4-206ENST00000419533 ATP10DQ9P241 1426 aa9.42□□□□□ -0.9
UBR4-206ENST00000419533 GAS8O95995 478 aa9.42□□□□□ -0.9
UBR4-206ENST00000419533 LIN9Q5TKA1 542 aa9.42□□□□□ -0.9
UBR4-206ENST00000419533 CCDC186Q7Z3E2 898 aa9.42□□□□□ -0.9
UBR4-206ENST00000419533 IFNL3Q8IZI9 196 aa9.42□□□□□ -0.9
UBR4-206ENST00000419533 GLG1Q92896 1179 aa9.42□□□□□ -0.9
UBR4-206ENST00000419533 UPF1Q92900 1129 aaKnown RBP eCLIP9.42□□□□□ -0.9
UBR4-206ENST00000419533 MTUS1Q9ULD2 1270 aa9.42□□□□□ -0.9
UBR4-206ENST00000419533 CD2APQ9Y5K6 639 aa9.42□□□□□ -0.9
UBR4-206ENST00000419533 ATP2A2P16615 1042 aaKnown RBP9.42□□□□□ -0.9
UBR4-206ENST00000419533 MYCT1Q8N699 235 aa9.42□□□□□ -0.9
UBR4-206ENST00000419533 RNF34Q969K3 372 aa9.42□□□□□ -0.9
UBR4-206ENST00000419533 MYL10Q9BUA6 226 aa9.42□□□□□ -0.9
UBR4-206ENST00000419533 KDM3AQ9Y4C1 1321 aa9.42□□□□□ -0.9
UBR4-206ENST00000419533 SMCO2A6NFE2 343 aa9.42□□□□□ -0.9
UBR4-206ENST00000419533 POLR2MP0CAP2 368 aa9.42□□□□□ -0.9
UBR4-206ENST00000419533 PDE6AP16499 860 aa9.42□□□□□ -0.9
UBR4-206ENST00000419533 TNFAIP3P21580 790 aa9.42□□□□□ -0.9
UBR4-206ENST00000419533 ICA1Q05084 483 aa9.42□□□□□ -0.9
UBR4-206ENST00000419533 KRT40Q6A162 431 aa9.42□□□□□ -0.9
UBR4-206ENST00000419533 STYK1Q6J9G0 422 aa9.42□□□□□ -0.9
UBR4-206ENST00000419533 MIER3Q7Z3K6 550 aa9.42□□□□□ -0.9
UBR4-206ENST00000419533 DHX37Q8IY37 1157 aaKnown RBP9.42□□□□□ -0.9
UBR4-206ENST00000419533 USP44Q9H0E7 712 aa9.42□□□□□ -0.9
UBR4-206ENST00000419533 GPBP1L1Q9HC44 474 aaPredicted RBP9.42□□□□□ -0.9
UBR4-206ENST00000419533 NDUFB9Q9Y6M9 179 aa9.42□□□□□ -0.9
UBR4-206ENST00000419533 GAS7O60861 476 aa9.42□□□□□ -0.9
UBR4-206ENST00000419533 COL23A1Q86Y22 540 aaPredicted RBP9.42□□□□□ -0.9
UBR4-206ENST00000419533 NRKQ7Z2Y5 1582 aa9.41□□□□□ -0.9
UBR4-206ENST00000419533 SEL1L2Q5TEA6 688 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms