RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 GPRC5AQ8NFJ5 357 aa24.21■■□□□ 1.47
GTF3A-202ENST00000419181 SH3TC2Q8TF17 1288 aa24.21■■□□□ 1.47
GTF3A-202ENST00000419181 VCPKMTQ9H867 229 aa24.21■■□□□ 1.47
GTF3A-202ENST00000419181 BRCA2P51587 3418 aa24.2■■□□□ 1.47
GTF3A-202ENST00000419181 FLT3LGP49771 235 aa24.2■■□□□ 1.46
GTF3A-202ENST00000419181 ALX1Q15699 326 aa24.2■■□□□ 1.46
GTF3A-202ENST00000419181 COA7Q96BR5 231 aa24.2■■□□□ 1.46
GTF3A-202ENST00000419181 PARP14Q460N5 1801 aa24.19■■□□□ 1.46
GTF3A-202ENST00000419181 CCDC171Q6TFL3 1326 aa24.19■■□□□ 1.46
GTF3A-202ENST00000419181 SPDYE16A6NNV3 312 aaPredicted RBP24.19■■□□□ 1.46
GTF3A-202ENST00000419181 SLC3A2P08195 630 aaKnown RBP24.19■■□□□ 1.46
GTF3A-202ENST00000419181 ERVK-9P63128 1117 aa24.19■■□□□ 1.46
GTF3A-202ENST00000419181 ERVK-24P63145 666 aa24.19■■□□□ 1.46
GTF3A-202ENST00000419181 PDE4BQ07343 736 aa24.19■■□□□ 1.46
GTF3A-202ENST00000419181 ZNF444Q8N0Y2 327 aaPredicted RBP24.19■■□□□ 1.46
GTF3A-202ENST00000419181 PAGR1Q9BTK6 254 aa24.19■■□□□ 1.46
GTF3A-202ENST00000419181 RABGAP1Q9Y3P9 1069 aa24.19■■□□□ 1.46
GTF3A-202ENST00000419181 A0A0G2JMZ2 1700 aa24.18■■□□□ 1.46
GTF3A-202ENST00000419181 PLIN4Q96Q06 1357 aa24.18■■□□□ 1.46
GTF3A-202ENST00000419181 IGKV6D-41A0A0C4DH26 115 aa24.18■■□□□ 1.46
GTF3A-202ENST00000419181 CNMDO75829 334 aa24.18■■□□□ 1.46
GTF3A-202ENST00000419181 GRK4P32298 578 aa24.18■■□□□ 1.46
GTF3A-202ENST00000419181 ATP2B2Q01814 1243 aa24.18■■□□□ 1.46
GTF3A-202ENST00000419181 IRF5Q13568 498 aa24.18■■□□□ 1.46
GTF3A-202ENST00000419181 Q3C1V9 767 aa24.18■■□□□ 1.46
GTF3A-202ENST00000419181 SPICE1Q8N0Z3 855 aa24.18■■□□□ 1.46
GTF3A-202ENST00000419181 ANAPC4Q9UJX5 808 aa24.18■■□□□ 1.46
GTF3A-202ENST00000419181 PLXNB2O15031 1838 aa24.18■■□□□ 1.46
GTF3A-202ENST00000419181 MYH4Q9Y623 1939 aa24.18■■□□□ 1.46
GTF3A-202ENST00000419181 ZMYM6O95789 1325 aa24.17■■□□□ 1.46
GTF3A-202ENST00000419181 HSPD1P10809 573 aaKnown RBP24.17■■□□□ 1.46
GTF3A-202ENST00000419181 TTC22Q5TAA0 569 aa24.17■■□□□ 1.46
GTF3A-202ENST00000419181 TANGO6Q9C0B7 1094 aa24.17■■□□□ 1.46
GTF3A-202ENST00000419181 NYAP2Q9P242 653 aa24.17■■□□□ 1.46
GTF3A-202ENST00000419181 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.17■■□□□ 1.46
GTF3A-202ENST00000419181 WDR46O15213 610 aaKnown RBP24.16■■□□□ 1.46
GTF3A-202ENST00000419181 FGAP02671 866 aa24.16■■□□□ 1.46
GTF3A-202ENST00000419181 GSPT1P15170 499 aaKnown RBP24.16■■□□□ 1.46
GTF3A-202ENST00000419181 COG2Q14746 738 aa24.16■■□□□ 1.46
GTF3A-202ENST00000419181 SLAIN1Q8ND83 568 aa24.16■■□□□ 1.46
GTF3A-202ENST00000419181 GOPCQ9HD26 462 aa24.16■■□□□ 1.46
GTF3A-202ENST00000419181 DIAPH3Q9NSV4 1193 aa24.16■■□□□ 1.46
GTF3A-202ENST00000419181 POTEFA5A3E0 1075 aa24.15■■□□□ 1.46
GTF3A-202ENST00000419181 HIP1O00291 1037 aa24.15■■□□□ 1.46
GTF3A-202ENST00000419181 ADCY3O60266 1144 aa24.15■■□□□ 1.46
GTF3A-202ENST00000419181 MAPK4P31152 587 aa24.15■■□□□ 1.46
GTF3A-202ENST00000419181 MFAP1P55081 439 aaKnown RBP24.15■■□□□ 1.46
GTF3A-202ENST00000419181 CTDSPL2Q05D32 466 aa24.15■■□□□ 1.46
GTF3A-202ENST00000419181 NEDD1Q8NHV4 660 aa24.15■■□□□ 1.46
GTF3A-202ENST00000419181 PXYLP1Q8TE99 480 aa24.15■■□□□ 1.46
GTF3A-202ENST00000419181 CEP95Q96GE4 821 aa24.15■■□□□ 1.46
GTF3A-202ENST00000419181 TMEM106CQ9BVX2 250 aa24.15■■□□□ 1.46
GTF3A-202ENST00000419181 PORCNQ9H237 461 aa24.15■■□□□ 1.46
GTF3A-202ENST00000419181 HOXC10Q9NYD6 342 aa24.15■■□□□ 1.46
GTF3A-202ENST00000419181 BTBD7Q9P203 1132 aa24.15■■□□□ 1.46
GTF3A-202ENST00000419181 GJD2Q9UKL4 321 aa24.15■■□□□ 1.46
GTF3A-202ENST00000419181 MYCP01106 439 aaPredicted RBP24.14■■□□□ 1.45
GTF3A-202ENST00000419181 TSPY3P0CV98 308 aa24.14■■□□□ 1.45
GTF3A-202ENST00000419181 TSPY8P0CW00 308 aa24.14■■□□□ 1.45
GTF3A-202ENST00000419181 CWC27Q6UX04 472 aaKnown RBP24.14■■□□□ 1.45
GTF3A-202ENST00000419181 MTMR4Q9NYA4 1195 aa24.14■■□□□ 1.45
GTF3A-202ENST00000419181 FLOT1O75955 427 aa24.13■■□□□ 1.45
GTF3A-202ENST00000419181 FAM47AQ5JRC9 791 aa24.13■■□□□ 1.45
GTF3A-202ENST00000419181 TACC3Q9Y6A5 838 aa24.13■■□□□ 1.45
GTF3A-202ENST00000419181 TNRC18O15417 2968 aaPredicted RBP24.12■■□□□ 1.45
GTF3A-202ENST00000419181 FGRP09769 529 aa24.12■■□□□ 1.45
GTF3A-202ENST00000419181 ELNP15502 786 aa24.12■■□□□ 1.45
GTF3A-202ENST00000419181 DSG3P32926 999 aa24.12■■□□□ 1.45
GTF3A-202ENST00000419181 CCNA1P78396 465 aa24.12■■□□□ 1.45
GTF3A-202ENST00000419181 TFAP4Q01664 338 aa24.12■■□□□ 1.45
GTF3A-202ENST00000419181 GPR142Q7Z601 462 aa24.12■■□□□ 1.45
GTF3A-202ENST00000419181 MKL1Q969V6 931 aa24.12■■□□□ 1.45
GTF3A-202ENST00000419181 INCENPQ9NQS7 918 aa24.12■■□□□ 1.45
GTF3A-202ENST00000419181 CLIP2Q9UDT6 1046 aa24.12■■□□□ 1.45
GTF3A-202ENST00000419181 SYNPO2Q9UMS6 1093 aa24.12■■□□□ 1.45
GTF3A-202ENST00000419181 ORC4O43929 436 aa24.11■■□□□ 1.45
GTF3A-202ENST00000419181 TTLL1O95922 423 aa24.11■■□□□ 1.45
GTF3A-202ENST00000419181 MTFR1Q15390 333 aa24.11■■□□□ 1.45
GTF3A-202ENST00000419181 CCAR1Q8IX12 1150 aaKnown RBP24.11■■□□□ 1.45
GTF3A-202ENST00000419181 MB21D1Q8N884 522 aa24.11■■□□□ 1.45
GTF3A-202ENST00000419181 SOCS4Q8WXH5 440 aa24.11■■□□□ 1.45
GTF3A-202ENST00000419181 LAMA4Q16363 1823 aa24.11■■□□□ 1.45
GTF3A-202ENST00000419181 F5H6K3 240 aa24.1■■□□□ 1.45
GTF3A-202ENST00000419181 RAD21O60216 631 aa24.1■■□□□ 1.45
GTF3A-202ENST00000419181 UBXN2AP68543 259 aa24.1■■□□□ 1.45
GTF3A-202ENST00000419181 KLRC3Q07444 240 aa24.1■■□□□ 1.45
GTF3A-202ENST00000419181 FAM83BQ5T0W9 1011 aa24.1■■□□□ 1.45
GTF3A-202ENST00000419181 ATG4CQ96DT6 458 aa24.1■■□□□ 1.45
GTF3A-202ENST00000419181 BIN2Q9UBW5 565 aaPredicted RBP24.1■■□□□ 1.45
GTF3A-202ENST00000419181 COL11A1P12107 1806 aaPredicted RBP24.1■■□□□ 1.45
GTF3A-202ENST00000419181 TSPY2A6NKD2 308 aa24.09■■□□□ 1.45
GTF3A-202ENST00000419181 NDUFB10O96000 172 aa24.09■■□□□ 1.45
GTF3A-202ENST00000419181 PLEKHH3Q7Z736 793 aa24.09■■□□□ 1.45
GTF3A-202ENST00000419181 USP6NLQ92738 828 aa24.09■■□□□ 1.45
GTF3A-202ENST00000419181 NUDT12Q9BQG2 462 aa24.09■■□□□ 1.45
GTF3A-202ENST00000419181 NBPF3Q9H094 633 aa24.09■■□□□ 1.45
GTF3A-202ENST00000419181 FBXO28Q9NVF7 368 aa24.09■■□□□ 1.45
GTF3A-202ENST00000419181 ADAMTS5Q9UNA0 930 aa24.09■■□□□ 1.45
GTF3A-202ENST00000419181 INHAP05111 366 aa24.08■■□□□ 1.45
GTF3A-202ENST00000419181 EN2P19622 333 aaPredicted RBP24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms