RNA–Protein interactions for RNA: ENST00000418713.5

RPUSD3-202, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 955 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-202ENST00000418713 CLIP2Q9UDT6 1046 aa23.44■■□□□ 1.34
RPUSD3-202ENST00000418713 CPA4Q9UI42 421 aa23.44■■□□□ 1.34
RPUSD3-202ENST00000418713 A0A1W2PRG0 241 aa23.43■■□□□ 1.34
RPUSD3-202ENST00000418713 WDR46O15213 610 aaKnown RBP23.43■■□□□ 1.34
RPUSD3-202ENST00000418713 VCAM1P19320 739 aa23.43■■□□□ 1.34
RPUSD3-202ENST00000418713 HAND2P61296 217 aa23.43■■□□□ 1.34
RPUSD3-202ENST00000418713 TRDNQ13061 729 aa23.43■■□□□ 1.34
RPUSD3-202ENST00000418713 FAM47AQ5JRC9 791 aa23.43■■□□□ 1.34
RPUSD3-202ENST00000418713 RRP12Q5JTH9 1297 aaKnown RBP23.43■■□□□ 1.34
RPUSD3-202ENST00000418713 TCP11L1Q9NUJ3 509 aa23.43■■□□□ 1.34
RPUSD3-202ENST00000418713 LOC285556D6RIA3 1793 aa23.42■■□□□ 1.34
RPUSD3-202ENST00000418713 IGKV6D-41A0A0C4DH26 115 aa23.42■■□□□ 1.34
RPUSD3-202ENST00000418713 SIAH1Q8IUQ4 282 aa23.42■■□□□ 1.34
RPUSD3-202ENST00000418713 ESYT1Q9BSJ8 1104 aa23.42■■□□□ 1.34
RPUSD3-202ENST00000418713 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.42■■□□□ 1.34
RPUSD3-202ENST00000418713 EFCC1Q9HA90 598 aa23.42■■□□□ 1.34
RPUSD3-202ENST00000418713 BCRP11274 1271 aa23.41■■□□□ 1.34
RPUSD3-202ENST00000418713 PRMT2P55345 433 aa23.41■■□□□ 1.34
RPUSD3-202ENST00000418713 DGKZQ13574 1117 aa23.41■■□□□ 1.34
RPUSD3-202ENST00000418713 COG2Q14746 738 aa23.41■■□□□ 1.34
RPUSD3-202ENST00000418713 FAM110CQ1W6H9 321 aa23.41■■□□□ 1.34
RPUSD3-202ENST00000418713 IQCA1Q86XH1 822 aa23.41■■□□□ 1.34
RPUSD3-202ENST00000418713 MAP4K1Q92918 833 aa23.41■■□□□ 1.34
RPUSD3-202ENST00000418713 CEP95Q96GE4 821 aa23.41■■□□□ 1.34
RPUSD3-202ENST00000418713 TTC14Q96N46 770 aa23.41■■□□□ 1.34
RPUSD3-202ENST00000418713 P2RX7Q99572 595 aaKnown RBP23.41■■□□□ 1.34
RPUSD3-202ENST00000418713 RPAP3Q9H6T3 665 aaPredicted RBP23.41■■□□□ 1.34
RPUSD3-202ENST00000418713 ADGRA2Q96PE1 1338 aa23.4■■□□□ 1.34
RPUSD3-202ENST00000418713 RAD21O60216 631 aa23.4■■□□□ 1.34
RPUSD3-202ENST00000418713 HERVK_113P62684 666 aa23.4■■□□□ 1.34
RPUSD3-202ENST00000418713 LACTBP83111 547 aaPredicted RBP23.4■■□□□ 1.34
RPUSD3-202ENST00000418713 TANGO6Q9C0B7 1094 aa23.4■■□□□ 1.34
RPUSD3-202ENST00000418713 STX8Q9UNK0 236 aa23.4■■□□□ 1.34
RPUSD3-202ENST00000418713 MYPNQ86TC9 1320 aa23.39■■□□□ 1.34
RPUSD3-202ENST00000418713 EIF5BO60841 1220 aaKnown RBP23.39■■□□□ 1.33
RPUSD3-202ENST00000418713 FCGRTP55899 365 aa23.39■■□□□ 1.33
RPUSD3-202ENST00000418713 CCAR1Q8IX12 1150 aaKnown RBP23.39■■□□□ 1.33
RPUSD3-202ENST00000418713 ANKRD13CQ8N6S4 541 aa23.39■■□□□ 1.33
RPUSD3-202ENST00000418713 GPRC5AQ8NFJ5 357 aa23.39■■□□□ 1.33
RPUSD3-202ENST00000418713 CD99L2Q8TCZ2 262 aa23.39■■□□□ 1.33
RPUSD3-202ENST00000418713 TRIM17Q9Y577 477 aa23.39■■□□□ 1.33
RPUSD3-202ENST00000418713 F5H6K3 240 aa23.38■■□□□ 1.33
RPUSD3-202ENST00000418713 CCNA1P78396 465 aa23.38■■□□□ 1.33
RPUSD3-202ENST00000418713 KLRC3Q07444 240 aa23.38■■□□□ 1.33
RPUSD3-202ENST00000418713 RNF20Q5VTR2 975 aa23.38■■□□□ 1.33
RPUSD3-202ENST00000418713 LBX2Q6XYB7 198 aa23.38■■□□□ 1.33
RPUSD3-202ENST00000418713 SKAP1Q86WV1 359 aa23.38■■□□□ 1.33
RPUSD3-202ENST00000418713 MB21D1Q8N884 522 aa23.38■■□□□ 1.33
RPUSD3-202ENST00000418713 GMCL1P1Q8NEA9 526 aa23.38■■□□□ 1.33
RPUSD3-202ENST00000418713 ANO2Q9NQ90 1003 aa23.38■■□□□ 1.33
RPUSD3-202ENST00000418713 RABGAP1Q9Y3P9 1069 aa23.38■■□□□ 1.33
RPUSD3-202ENST00000418713 FMNL1O95466 1100 aaPredicted RBP23.37■■□□□ 1.33
RPUSD3-202ENST00000418713 PTH1RQ03431 593 aa23.37■■□□□ 1.33
RPUSD3-202ENST00000418713 CLEC10AQ8IUN9 316 aa23.37■■□□□ 1.33
RPUSD3-202ENST00000418713 IL25Q9H293 177 aa23.37■■□□□ 1.33
RPUSD3-202ENST00000418713 INCENPQ9NQS7 918 aa23.37■■□□□ 1.33
RPUSD3-202ENST00000418713 MORF4L1Q9UBU8 362 aa23.37■■□□□ 1.33
RPUSD3-202ENST00000418713 FLOT1O75955 427 aa23.36■■□□□ 1.33
RPUSD3-202ENST00000418713 PSMC4P43686 418 aa23.36■■□□□ 1.33
RPUSD3-202ENST00000418713 DGKHQ86XP1 1220 aa23.36■■□□□ 1.33
RPUSD3-202ENST00000418713 TBC1D10CQ8IV04 446 aa23.36■■□□□ 1.33
RPUSD3-202ENST00000418713 SPICE1Q8N0Z3 855 aa23.36■■□□□ 1.33
RPUSD3-202ENST00000418713 GREB1LQ9C091 1923 aaPredicted RBP23.35■■□□□ 1.33
RPUSD3-202ENST00000418713 TOP1P11387 765 aaKnown RBP23.35■■□□□ 1.33
RPUSD3-202ENST00000418713 FBXO46Q6PJ61 603 aaPredicted RBP23.35■■□□□ 1.33
RPUSD3-202ENST00000418713 OTOP1Q7RTM1 612 aa23.35■■□□□ 1.33
RPUSD3-202ENST00000418713 RALYLQ86SE5 291 aaKnown RBP23.35■■□□□ 1.33
RPUSD3-202ENST00000418713 NCOA7Q8NI08 942 aa23.35■■□□□ 1.33
RPUSD3-202ENST00000418713 COA7Q96BR5 231 aa23.35■■□□□ 1.33
RPUSD3-202ENST00000418713 IL17RBQ9NRM6 502 aa23.35■■□□□ 1.33
RPUSD3-202ENST00000418713 RBM8AQ9Y5S9 174 aaKnown RBP23.35■■□□□ 1.33
RPUSD3-202ENST00000418713 FDX1P10109 184 aa23.34■■□□□ 1.33
RPUSD3-202ENST00000418713 DSG3P32926 999 aa23.34■■□□□ 1.33
RPUSD3-202ENST00000418713 NOVP48745 357 aa23.34■■□□□ 1.33
RPUSD3-202ENST00000418713 SLFN13Q68D06 897 aa23.34■■□□□ 1.33
RPUSD3-202ENST00000418713 UBAC1Q9BSL1 405 aa23.34■■□□□ 1.33
RPUSD3-202ENST00000418713 MCOLN1Q9GZU1 580 aa23.34■■□□□ 1.33
RPUSD3-202ENST00000418713 NBPF3Q9H094 633 aa23.34■■□□□ 1.33
RPUSD3-202ENST00000418713 TNPO2O14787 897 aaKnown RBP23.33■■□□□ 1.33
RPUSD3-202ENST00000418713 KDM4AO75164 1064 aa23.33■■□□□ 1.33
RPUSD3-202ENST00000418713 REC8O95072 547 aa23.33■■□□□ 1.33
RPUSD3-202ENST00000418713 NDUFB10O96000 172 aa23.33■■□□□ 1.33
RPUSD3-202ENST00000418713 CYP21A2P08686 494 aa23.33■■□□□ 1.33
RPUSD3-202ENST00000418713 MAPK4P31152 587 aa23.33■■□□□ 1.33
RPUSD3-202ENST00000418713 SART3Q15020 963 aaKnown RBP23.33■■□□□ 1.33
RPUSD3-202ENST00000418713 RCSD1Q6JBY9 416 aa23.33■■□□□ 1.33
RPUSD3-202ENST00000418713 CHURC1Q8WUH1 139 aa23.33■■□□□ 1.33
RPUSD3-202ENST00000418713 LSG1Q9H089 658 aaKnown RBP23.33■■□□□ 1.33
RPUSD3-202ENST00000418713 CWC22Q9HCG8 908 aaKnown RBP23.33■■□□□ 1.33
RPUSD3-202ENST00000418713 FEM1BQ9UK73 627 aa23.33■■□□□ 1.33
RPUSD3-202ENST00000418713 CTDP1Q9Y5B0 961 aaPredicted RBP23.33■■□□□ 1.33
RPUSD3-202ENST00000418713 ERICH2A1L162 156 aa23.32■■□□□ 1.32
RPUSD3-202ENST00000418713 B4E1Z4 1266 aa23.32■■□□□ 1.32
RPUSD3-202ENST00000418713 BMP3P12645 472 aa23.32■■□□□ 1.32
RPUSD3-202ENST00000418713 SLC1A4P43007 532 aa23.32■■□□□ 1.32
RPUSD3-202ENST00000418713 ERVK-9P63128 1117 aa23.32■■□□□ 1.32
RPUSD3-202ENST00000418713 ERVK-24P63145 666 aa23.32■■□□□ 1.32
RPUSD3-202ENST00000418713 PRPF38AQ8NAV1 312 aaKnown RBP23.32■■□□□ 1.32
RPUSD3-202ENST00000418713 GMCL1Q96IK5 515 aa23.32■■□□□ 1.32
RPUSD3-202ENST00000418713 PAGR1Q9BTK6 254 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms