RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 VPS53Q5VIR6 699 aa12.56□□□□□ -0.4
RFC1-203ENST00000418436 GPAT2Q6NUI2 795 aa12.56□□□□□ -0.4
RFC1-203ENST00000418436 ANKRD23Q86SG2 305 aa12.56□□□□□ -0.4
RFC1-203ENST00000418436 ZNF589Q86UQ0 364 aaPredicted RBP12.56□□□□□ -0.4
RFC1-203ENST00000418436 SLC44A5Q8NCS7 719 aa12.56□□□□□ -0.4
RFC1-203ENST00000418436 NACAP1Q9BZK3 213 aa12.56□□□□□ -0.4
RFC1-203ENST00000418436 R3HDMLQ9H3Y0 253 aa12.56□□□□□ -0.4
RFC1-203ENST00000418436 AS3MTQ9HBK9 375 aa12.56□□□□□ -0.4
RFC1-203ENST00000418436 GREB1LQ9C091 1923 aaPredicted RBP12.56□□□□□ -0.4
RFC1-203ENST00000418436 TRIM75PA6NK02 468 aa12.55□□□□□ -0.4
RFC1-203ENST00000418436 MINDY4BA8MYZ0 360 aa12.55□□□□□ -0.4
RFC1-203ENST00000418436 GUCY1A2P33402 732 aa12.55□□□□□ -0.4
RFC1-203ENST00000418436 FASTKD5Q7L8L6 764 aaKnown RBP12.55□□□□□ -0.4
RFC1-203ENST00000418436 CCDC17Q96LX7 622 aa12.55□□□□□ -0.4
RFC1-203ENST00000418436 NAPBQ9H115 298 aa12.55□□□□□ -0.4
RFC1-203ENST00000418436 DIAPH3Q9NSV4 1193 aa12.55□□□□□ -0.4
RFC1-203ENST00000418436 CCDC171Q6TFL3 1326 aa12.55□□□□□ -0.4
RFC1-203ENST00000418436 GPR25O00155 361 aa12.54□□□□□ -0.4
RFC1-203ENST00000418436 HSPD1P10809 573 aaKnown RBP12.54□□□□□ -0.4
RFC1-203ENST00000418436 MFAP1P55081 439 aaKnown RBP12.54□□□□□ -0.4
RFC1-203ENST00000418436 BACE1P56817 501 aa12.54□□□□□ -0.4
RFC1-203ENST00000418436 CRHR2Q13324 411 aa12.54□□□□□ -0.4
RFC1-203ENST00000418436 CWC27Q6UX04 472 aaKnown RBP12.54□□□□□ -0.4
RFC1-203ENST00000418436 PROCA1Q8NCQ7 364 aaPredicted RBP12.54□□□□□ -0.4
RFC1-203ENST00000418436 CABP5Q9NP86 173 aa12.54□□□□□ -0.4
RFC1-203ENST00000418436 EMILIN3Q9NT22 766 aa12.54□□□□□ -0.4
RFC1-203ENST00000418436 PPP4R2Q9NY27 417 aa12.54□□□□□ -0.4
RFC1-203ENST00000418436 SLC45A1Q9Y2W3 748 aa12.54□□□□□ -0.4
RFC1-203ENST00000418436 ZMYM6O95789 1325 aa12.54□□□□□ -0.4
RFC1-203ENST00000418436 C19orf81C9J6K1 198 aa12.53□□□□□ -0.4
RFC1-203ENST00000418436 USP17L10C9JJH3 530 aa12.53□□□□□ -0.4
RFC1-203ENST00000418436 PDHXO00330 501 aa12.53□□□□□ -0.4
RFC1-203ENST00000418436 FGAP02671 866 aa12.53□□□□□ -0.4
RFC1-203ENST00000418436 AKR1B1P15121 316 aa12.53□□□□□ -0.4
RFC1-203ENST00000418436 CHMLP26374 656 aa12.53□□□□□ -0.4
RFC1-203ENST00000418436 PPARAQ07869 468 aa12.53□□□□□ -0.4
RFC1-203ENST00000418436 SEPT2Q15019 361 aa12.53□□□□□ -0.4
RFC1-203ENST00000418436 TAF1CQ15572 869 aaPredicted RBP12.53□□□□□ -0.4
RFC1-203ENST00000418436 COL13A1Q5TAT6 717 aaPredicted RBP12.53□□□□□ -0.4
RFC1-203ENST00000418436 POTEEQ6S8J3 1075 aa12.53□□□□□ -0.4
RFC1-203ENST00000418436 TMEM179Q6ZVK1 233 aa12.53□□□□□ -0.4
RFC1-203ENST00000418436 SKAP1Q86WV1 359 aa12.53□□□□□ -0.4
RFC1-203ENST00000418436 ZFYVE28Q9HCC9 887 aa12.53□□□□□ -0.4
RFC1-203ENST00000418436 ANAPC4Q9UJX5 808 aa12.53□□□□□ -0.4
RFC1-203ENST00000418436 RASA1P20936 1047 aa12.52□□□□□ -0.41
RFC1-203ENST00000418436 HMGCS2P54868 508 aa12.52□□□□□ -0.41
RFC1-203ENST00000418436 LSM11P83369 360 aaKnown RBP eCLIP12.52□□□□□ -0.41
RFC1-203ENST00000418436 MTMR2Q13614 643 aa12.52□□□□□ -0.41
RFC1-203ENST00000418436 RAB3GAP1Q15042 981 aa12.52□□□□□ -0.41
RFC1-203ENST00000418436 PPP4R3BQ5MIZ7 849 aa12.52□□□□□ -0.41
RFC1-203ENST00000418436 GADL1Q6ZQY3 521 aa12.52□□□□□ -0.41
RFC1-203ENST00000418436 SIAH1Q8IUQ4 282 aa12.52□□□□□ -0.41
RFC1-203ENST00000418436 ZNF296Q8WUU4 475 aaPredicted RBP12.52□□□□□ -0.41
RFC1-203ENST00000418436 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.52□□□□□ -0.41
RFC1-203ENST00000418436 IL25Q9H293 177 aa12.52□□□□□ -0.41
RFC1-203ENST00000418436 AGTPBP1Q9UPW5 1226 aa12.52□□□□□ -0.41
RFC1-203ENST00000418436 LAMA4Q16363 1823 aa12.52□□□□□ -0.41
RFC1-203ENST00000418436 ADGRA2Q96PE1 1338 aa12.52□□□□□ -0.41
RFC1-203ENST00000418436 MPHOSPH10O00566 681 aaKnown RBP12.51□□□□□ -0.41
RFC1-203ENST00000418436 TLR2O60603 784 aa12.51□□□□□ -0.41
RFC1-203ENST00000418436 SLC3A2P08195 630 aaKnown RBP12.51□□□□□ -0.41
RFC1-203ENST00000418436 FGRP09769 529 aa12.51□□□□□ -0.41
RFC1-203ENST00000418436 CAMK2BQ13554 666 aa12.51□□□□□ -0.41
RFC1-203ENST00000418436 DGKZQ13574 1117 aa12.51□□□□□ -0.41
RFC1-203ENST00000418436 BMP2KLQ5H9B9 411 aa12.51□□□□□ -0.41
RFC1-203ENST00000418436 TREML2Q5T2D2 321 aa12.51□□□□□ -0.41
RFC1-203ENST00000418436 ACER1Q8TDN7 264 aa12.51□□□□□ -0.41
RFC1-203ENST00000418436 C12orf42Q96LP6 360 aa12.51□□□□□ -0.41
RFC1-203ENST00000418436 KIAA1683Q9H0B3 1180 aa12.51□□□□□ -0.41
RFC1-203ENST00000418436 MKNK2Q9HBH9 465 aa12.51□□□□□ -0.41
RFC1-203ENST00000418436 ZNF287Q9HBT7 754 aa12.51□□□□□ -0.41
RFC1-203ENST00000418436 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.51□□□□□ -0.41
RFC1-203ENST00000418436 RAD50Q92878 1312 aa12.51□□□□□ -0.41
RFC1-203ENST00000418436 A0A1W2PRG0 241 aa12.5□□□□□ -0.41
RFC1-203ENST00000418436 FKTNO75072 461 aa12.5□□□□□ -0.41
RFC1-203ENST00000418436 HOXA7P31268 230 aaPredicted RBP12.5□□□□□ -0.41
RFC1-203ENST00000418436 PDE4BQ07343 736 aa12.5□□□□□ -0.41
RFC1-203ENST00000418436 USP17L2Q6R6M4 530 aa12.5□□□□□ -0.41
RFC1-203ENST00000418436 C17orf99Q6UX52 265 aa12.5□□□□□ -0.41
RFC1-203ENST00000418436 STK11IPQ8N1F8 1099 aa12.5□□□□□ -0.41
RFC1-203ENST00000418436 RUFY2Q8WXA3 655 aa12.5□□□□□ -0.41
RFC1-203ENST00000418436 DSCC1Q9BVC3 393 aa12.5□□□□□ -0.41
RFC1-203ENST00000418436 KANSL2Q9H9L4 492 aa12.5□□□□□ -0.41
RFC1-203ENST00000418436 TMOD4Q9NZQ9 345 aa12.5□□□□□ -0.41
RFC1-203ENST00000418436 TACC3Q9Y6A5 838 aa12.5□□□□□ -0.41
RFC1-203ENST00000418436 MYH4Q9Y623 1939 aa12.49□□□□□ -0.41
RFC1-203ENST00000418436 PLIN4Q96Q06 1357 aa12.49□□□□□ -0.41
RFC1-203ENST00000418436 IGKV6D-41A0A0C4DH26 115 aa12.49□□□□□ -0.41
RFC1-203ENST00000418436 EVI5O60447 810 aa12.49□□□□□ -0.41
RFC1-203ENST00000418436 PRDM1O75626 825 aa12.49□□□□□ -0.41
RFC1-203ENST00000418436 CYP2C8P10632 490 aa12.49□□□□□ -0.41
RFC1-203ENST00000418436 USP14P54578 494 aa12.49□□□□□ -0.41
RFC1-203ENST00000418436 CTDSPL2Q05D32 466 aa12.49□□□□□ -0.41
RFC1-203ENST00000418436 PABPC4Q13310 644 aaKnown RBP eCLIP12.49□□□□□ -0.41
RFC1-203ENST00000418436 ZNF444Q8N0Y2 327 aaPredicted RBP12.49□□□□□ -0.41
RFC1-203ENST00000418436 PARK7Q99497 189 aaKnown RBP12.49□□□□□ -0.41
RFC1-203ENST00000418436 TMX2Q9Y320 296 aa12.49□□□□□ -0.41
RFC1-203ENST00000418436 SGSM2O43147 1006 aa12.48□□□□□ -0.41
RFC1-203ENST00000418436 ORC4O43929 436 aa12.48□□□□□ -0.41
RFC1-203ENST00000418436 BCRP11274 1271 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms