RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 V9GY48 417 aaPredicted RBP19.71■□□□□ 0.75
CALD1-204ENST00000417172 TOP1P11387 765 aaKnown RBP19.7■□□□□ 0.74
CALD1-204ENST00000417172 ATP2B2Q01814 1243 aa19.7■□□□□ 0.74
CALD1-204ENST00000417172 PPP2R5BQ15173 497 aa19.7■□□□□ 0.74
CALD1-204ENST00000417172 PKN1Q16512 942 aa19.7■□□□□ 0.74
CALD1-204ENST00000417172 KIF4BQ2VIQ3 1234 aa19.7■□□□□ 0.74
CALD1-204ENST00000417172 FTOQ9C0B1 505 aaKnown RBP eCLIP19.7■□□□□ 0.742e-6■■□□□ 12.1
CALD1-204ENST00000417172 GADD45BO75293 160 aaPredicted RBP19.7■□□□□ 0.74
CALD1-204ENST00000417172 VEGFAP15692 232 aaPredicted RBP19.7■□□□□ 0.74
CALD1-204ENST00000417172 USP17L2Q6R6M4 530 aa19.7■□□□□ 0.74
CALD1-204ENST00000417172 RNF26Q9BY78 433 aaPredicted RBP19.7■□□□□ 0.74
CALD1-204ENST00000417172 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.7■□□□□ 0.743e-13■■■■■ 29.2
CALD1-204ENST00000417172 KCNJ14Q9UNX9 436 aa19.7■□□□□ 0.74
CALD1-204ENST00000417172 USP17L5A8MUK1 530 aa19.69■□□□□ 0.74
CALD1-204ENST00000417172 DEXIO95424 95 aa19.69■□□□□ 0.74
CALD1-204ENST00000417172 SEPT2Q15019 361 aa19.69■□□□□ 0.74
CALD1-204ENST00000417172 FKBP1CQ5VVH2 108 aa19.69■□□□□ 0.74
CALD1-204ENST00000417172 MIGA2Q7L4E1 593 aa19.69■□□□□ 0.74
CALD1-204ENST00000417172 TRPM4Q8TD43 1214 aa19.69■□□□□ 0.74
CALD1-204ENST00000417172 PGAP2Q9UHJ9 254 aa19.69■□□□□ 0.74
CALD1-204ENST00000417172 TTLL1O95922 423 aa19.68■□□□□ 0.74
CALD1-204ENST00000417172 KIF5BP33176 963 aa19.68■□□□□ 0.74
CALD1-204ENST00000417172 FAM83AQ86UY5 434 aa19.68■□□□□ 0.74
CALD1-204ENST00000417172 CCDC17Q96LX7 622 aa19.68■□□□□ 0.74
CALD1-204ENST00000417172 GZF1Q9H116 711 aaPredicted RBP19.68■□□□□ 0.74
CALD1-204ENST00000417172 ZSCAN16Q9H4T2 348 aaPredicted RBP19.68■□□□□ 0.74
CALD1-204ENST00000417172 FRMPD2Q68DX3 1309 aaPredicted RBP19.68■□□□□ 0.74
CALD1-204ENST00000417172 PRPF3O43395 683 aaKnown RBP19.68■□□□□ 0.74
CALD1-204ENST00000417172 CYTH3O43739 400 aa19.68■□□□□ 0.74
CALD1-204ENST00000417172 DDNO94850 711 aaPredicted RBP19.68■□□□□ 0.74
CALD1-204ENST00000417172 EPS15P42566 896 aa19.68■□□□□ 0.74
CALD1-204ENST00000417172 KIF23Q02241 960 aaPredicted RBP19.68■□□□□ 0.74
CALD1-204ENST00000417172 RASA3Q14644 834 aa19.68■□□□□ 0.74
CALD1-204ENST00000417172 GPT2Q8TD30 523 aa19.68■□□□□ 0.74
CALD1-204ENST00000417172 GPRC5DQ9NZD1 345 aa19.68■□□□□ 0.74
CALD1-204ENST00000417172 VPS54Q9P1Q0 977 aa19.68■□□□□ 0.74
CALD1-204ENST00000417172 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.68■□□□□ 0.74
CALD1-204ENST00000417172 HACL1Q9UJ83 578 aa19.68■□□□□ 0.74
CALD1-204ENST00000417172 POLR2AP24928 1970 aaKnown RBP19.68■□□□□ 0.74
CALD1-204ENST00000417172 PALM3A6NDB9 673 aaPredicted RBP19.67■□□□□ 0.74
CALD1-204ENST00000417172 GH2P01242 217 aa19.67■□□□□ 0.74
CALD1-204ENST00000417172 CEBPZQ03701 1054 aaKnown RBP19.67■□□□□ 0.74
CALD1-204ENST00000417172 ABCB5Q2M3G0 1257 aa19.67■□□□□ 0.74
CALD1-204ENST00000417172 GPC2Q8N158 579 aa19.67■□□□□ 0.74
CALD1-204ENST00000417172 MAP3K14Q99558 947 aa19.67■□□□□ 0.74
CALD1-204ENST00000417172 ATAD5Q96QE3 1844 aa19.67■□□□□ 0.74
CALD1-204ENST00000417172 PDHBP11177 359 aa19.66■□□□□ 0.74
CALD1-204ENST00000417172 KRT85P78386 507 aa19.66■□□□□ 0.74
CALD1-204ENST00000417172 AKAP17AQ02040 695 aaKnown RBP19.66■□□□□ 0.74
CALD1-204ENST00000417172 SIAH1Q8IUQ4 282 aa19.66■□□□□ 0.74
CALD1-204ENST00000417172 WASF1Q92558 559 aa19.66■□□□□ 0.74
CALD1-204ENST00000417172 DDX49Q9Y6V7 483 aaKnown RBP19.66■□□□□ 0.74
CALD1-204ENST00000417172 EEF2P13639 858 aaKnown RBP19.66■□□□□ 0.74
CALD1-204ENST00000417172 TRIM29Q14134 588 aa19.66■□□□□ 0.74
CALD1-204ENST00000417172 C9orf131Q5VYM1 1079 aa19.66■□□□□ 0.74
CALD1-204ENST00000417172 HERC5Q9UII4 1024 aaKnown RBP19.66■□□□□ 0.74
CALD1-204ENST00000417172 KLRF2D3W0D1 207 aa19.65■□□□□ 0.74
CALD1-204ENST00000417172 H7C1D1 291 aa19.65■□□□□ 0.74
CALD1-204ENST00000417172 PARP1P09874 1014 aaKnown RBP19.65■□□□□ 0.74
CALD1-204ENST00000417172 TMEM87AQ8NBN3 555 aa19.65■□□□□ 0.74
CALD1-204ENST00000417172 TEPSINQ96N21 525 aa19.65■□□□□ 0.74
CALD1-204ENST00000417172 ICA1Q05084 483 aa19.64■□□□□ 0.74
CALD1-204ENST00000417172 TMEM179Q6ZVK1 233 aa19.64■□□□□ 0.74
CALD1-204ENST00000417172 RAD21O60216 631 aa19.64■□□□□ 0.73
CALD1-204ENST00000417172 MMP1P03956 469 aa19.64■□□□□ 0.73
CALD1-204ENST00000417172 HIRAP54198 1017 aaPredicted RBP19.64■□□□□ 0.73
CALD1-204ENST00000417172 ANGEL2Q5VTE6 544 aaKnown RBP19.64■□□□□ 0.73
CALD1-204ENST00000417172 OXER1Q8TDS5 423 aa19.64■□□□□ 0.73
CALD1-204ENST00000417172 GPKOWQ92917 476 aaPredicted RBP eCLIP19.64■□□□□ 0.73
CALD1-204ENST00000417172 USP28Q96RU2 1077 aa19.64■□□□□ 0.73
CALD1-204ENST00000417172 UBA5Q9GZZ9 404 aa19.64■□□□□ 0.73
CALD1-204ENST00000417172 BTBD18B2RXH4 712 aa19.63■□□□□ 0.73
CALD1-204ENST00000417172 PTMSP20962 102 aa19.63■□□□□ 0.73
CALD1-204ENST00000417172 TNNI2P48788 182 aa19.63■□□□□ 0.73
CALD1-204ENST00000417172 MMP14P50281 582 aa19.63■□□□□ 0.73
CALD1-204ENST00000417172 PRAMEF18Q5VWM3 479 aa19.63■□□□□ 0.73
CALD1-204ENST00000417172 KANSL2Q9H9L4 492 aa19.63■□□□□ 0.73
CALD1-204ENST00000417172 GPCPD1Q9NPB8 672 aa19.63■□□□□ 0.73
CALD1-204ENST00000417172 ADAMTS3O15072 1205 aa19.63■□□□□ 0.73
CALD1-204ENST00000417172 SCG2P13521 617 aa19.63■□□□□ 0.73
CALD1-204ENST00000417172 NR5A1Q13285 461 aa19.63■□□□□ 0.73
CALD1-204ENST00000417172 DIS3L2Q8IYB7 885 aaKnown RBP19.63■□□□□ 0.73
CALD1-204ENST00000417172 LEO1Q8WVC0 666 aaPredicted RBP19.63■□□□□ 0.73
CALD1-204ENST00000417172 DEFB129Q9H1M3 183 aa19.63■□□□□ 0.73
CALD1-204ENST00000417172 RBM27Q9P2N5 1060 aaKnown RBP19.63■□□□□ 0.73
CALD1-204ENST00000417172 SNHG28P0DPA3 235 aa19.62■□□□□ 0.73
CALD1-204ENST00000417172 PFKFB3Q16875 520 aaPredicted RBP19.62■□□□□ 0.73
CALD1-204ENST00000417172 KLHL40Q2TBA0 621 aa19.62■□□□□ 0.73
CALD1-204ENST00000417172 SPATA32Q96LK8 384 aa19.62■□□□□ 0.73
CALD1-204ENST00000417172 VAT1LQ9HCJ6 419 aa19.62■□□□□ 0.73
CALD1-204ENST00000417172 A0A1W2PRG0 241 aa19.61■□□□□ 0.73
CALD1-204ENST00000417172 GNAQP50148 359 aa19.61■□□□□ 0.73
CALD1-204ENST00000417172 GNL2Q13823 731 aaKnown RBP19.61■□□□□ 0.73
CALD1-204ENST00000417172 TNFAIP1Q13829 316 aa19.61■□□□□ 0.73
CALD1-204ENST00000417172 GPR162Q16538 588 aa19.61■□□□□ 0.73
CALD1-204ENST00000417172 MYSM1Q5VVJ2 828 aa19.61■□□□□ 0.73
CALD1-204ENST00000417172 TTBK2Q6IQ55 1244 aa19.61■□□□□ 0.73
CALD1-204ENST00000417172 KCTD1Q719H9 257 aa19.61■□□□□ 0.73
CALD1-204ENST00000417172 CCDC84Q86UT8 332 aaPredicted RBP19.61■□□□□ 0.73
CALD1-204ENST00000417172 GGA3Q9NZ52 723 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms