RNA–Protein interactions for RNA: ENST00000416842.1

AP001042.1-201, humanhuman

TSL 3 BASIC

Gene AP001042.1, Length 487 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001042.1-201ENST00000416842 CFAP100Q494V2 611 aa9.47□□□□□ -0.89
AP001042.1-201ENST00000416842 SLC9C1Q4G0N8 1177 aa9.47□□□□□ -0.89
AP001042.1-201ENST00000416842 RCSD1Q6JBY9 416 aa9.47□□□□□ -0.89
AP001042.1-201ENST00000416842 SH3BP5LQ7L8J4 393 aa9.47□□□□□ -0.89
AP001042.1-201ENST00000416842 MAPKAPK5Q8IW41 473 aa9.47□□□□□ -0.89
AP001042.1-201ENST00000416842 CCDC83Q8IWF9 413 aa9.47□□□□□ -0.89
AP001042.1-201ENST00000416842 FBXW7Q969H0 707 aa9.47□□□□□ -0.89
AP001042.1-201ENST00000416842 PTPN18Q99952 460 aa9.47□□□□□ -0.89
AP001042.1-201ENST00000416842 OSBPL5Q9H0X9 879 aaPredicted RBP9.47□□□□□ -0.89
AP001042.1-201ENST00000416842 EHD4Q9H223 541 aa9.47□□□□□ -0.89
AP001042.1-201ENST00000416842 IL17RBQ9NRM6 502 aa9.47□□□□□ -0.89
AP001042.1-201ENST00000416842 MYCP01106 439 aaPredicted RBP9.46□□□□□ -0.9
AP001042.1-201ENST00000416842 MAP3K10Q02779 954 aa9.46□□□□□ -0.9
AP001042.1-201ENST00000416842 PDE4BQ07343 736 aa9.46□□□□□ -0.9
AP001042.1-201ENST00000416842 OTUD7BQ6GQQ9 843 aa9.46□□□□□ -0.9
AP001042.1-201ENST00000416842 APOA5Q6Q788 366 aa9.46□□□□□ -0.9
AP001042.1-201ENST00000416842 NOL8Q76FK4 1167 aaKnown RBP9.46□□□□□ -0.9
AP001042.1-201ENST00000416842 NBPF11Q86T75 865 aa9.46□□□□□ -0.9
AP001042.1-201ENST00000416842 DGKHQ86XP1 1220 aa9.46□□□□□ -0.9
AP001042.1-201ENST00000416842 ZFPM1Q8IX07 1006 aa9.46□□□□□ -0.9
AP001042.1-201ENST00000416842 ENAHQ8N8S7 591 aaPredicted RBP9.46□□□□□ -0.9
AP001042.1-201ENST00000416842 NSUN7Q8NE18 718 aaKnown RBP9.46□□□□□ -0.9
AP001042.1-201ENST00000416842 NEDD1Q8NHV4 660 aa9.46□□□□□ -0.9
AP001042.1-201ENST00000416842 DYNLL2Q96FJ2 89 aa9.46□□□□□ -0.9
AP001042.1-201ENST00000416842 ZSCAN10Q96SZ4 725 aaPredicted RBP9.46□□□□□ -0.9
AP001042.1-201ENST00000416842 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.46□□□□□ -0.9
AP001042.1-201ENST00000416842 DHX36Q9H2U1 1008 aaKnown RBP9.46□□□□□ -0.9
AP001042.1-201ENST00000416842 PRO3102Q9H379 93 aa9.46□□□□□ -0.9
AP001042.1-201ENST00000416842 ATRNL1Q5VV63 1379 aa9.46□□□□□ -0.9
AP001042.1-201ENST00000416842 COL2A1P02458 1487 aaPredicted RBP9.46□□□□□ -0.9
AP001042.1-201ENST00000416842 IGKV6D-41A0A0C4DH26 115 aa9.45□□□□□ -0.9
AP001042.1-201ENST00000416842 KLF18A0A0U1RQI7 1052 aa9.45□□□□□ -0.9
AP001042.1-201ENST00000416842 IFIT3O14879 490 aaKnown RBP9.45□□□□□ -0.9
AP001042.1-201ENST00000416842 POLR3DP05423 398 aaPredicted RBP9.45□□□□□ -0.9
AP001042.1-201ENST00000416842 FDPSP14324 419 aaKnown RBP9.45□□□□□ -0.9
AP001042.1-201ENST00000416842 SYT1P21579 422 aa9.45□□□□□ -0.9
AP001042.1-201ENST00000416842 TROAPQ12815 778 aa9.45□□□□□ -0.9
AP001042.1-201ENST00000416842 PKP1Q13835 747 aa9.45□□□□□ -0.9
AP001042.1-201ENST00000416842 PPP2R5BQ15173 497 aa9.45□□□□□ -0.9
AP001042.1-201ENST00000416842 CCDC178Q5BJE1 867 aa9.45□□□□□ -0.9
AP001042.1-201ENST00000416842 TMEM67Q5HYA8 995 aa9.45□□□□□ -0.9
AP001042.1-201ENST00000416842 TTC6Q86TZ1 520 aa9.45□□□□□ -0.9
AP001042.1-201ENST00000416842 FOXP4Q8IVH2 680 aaPredicted RBP9.45□□□□□ -0.9
AP001042.1-201ENST00000416842 TNPO1Q92973 898 aaKnown RBP9.45□□□□□ -0.9
AP001042.1-201ENST00000416842 MAP3K14Q99558 947 aa9.45□□□□□ -0.9
AP001042.1-201ENST00000416842 DEFB129Q9H1M3 183 aa9.45□□□□□ -0.9
AP001042.1-201ENST00000416842 SMC3Q9UQE7 1217 aa9.45□□□□□ -0.9
AP001042.1-201ENST00000416842 PLIN4Q96Q06 1357 aa9.45□□□□□ -0.9
AP001042.1-201ENST00000416842 DDX60LQ5H9U9 1706 aaKnown RBP9.45□□□□□ -0.9
AP001042.1-201ENST00000416842 ALPK3Q96L96 1907 aa9.44□□□□□ -0.9
AP001042.1-201ENST00000416842 RANBP2P49792 3224 aaKnown RBP9.44□□□□□ -0.9
AP001042.1-201ENST00000416842 TESPA1A2RU30 521 aaPredicted RBP9.44□□□□□ -0.9
AP001042.1-201ENST00000416842 DDTLA6NHG4 134 aaPredicted RBP9.44□□□□□ -0.9
AP001042.1-201ENST00000416842 PPP1R12BO60237 982 aaPredicted RBP9.44□□□□□ -0.9
AP001042.1-201ENST00000416842 PRDM1O75626 825 aa9.44□□□□□ -0.9
AP001042.1-201ENST00000416842 HSP90AA1P07900 732 aaKnown RBP9.44□□□□□ -0.9
AP001042.1-201ENST00000416842 GJB2P29033 226 aa9.44□□□□□ -0.9
AP001042.1-201ENST00000416842 SHMT1P34896 483 aa9.44□□□□□ -0.9
AP001042.1-201ENST00000416842 TFAP4Q01664 338 aa9.44□□□□□ -0.9
AP001042.1-201ENST00000416842 FUT2Q10981 343 aa9.44□□□□□ -0.9
AP001042.1-201ENST00000416842 TATDN1Q6P1N9 297 aa9.44□□□□□ -0.9
AP001042.1-201ENST00000416842 SH3TC2Q8TF17 1288 aa9.44□□□□□ -0.9
AP001042.1-201ENST00000416842 SHISA4Q96DD7 197 aa9.44□□□□□ -0.9
AP001042.1-201ENST00000416842 ZNF287Q9HBT7 754 aa9.44□□□□□ -0.9
AP001042.1-201ENST00000416842 ZNF70Q9UC06 446 aaPredicted RBP9.44□□□□□ -0.9
AP001042.1-201ENST00000416842 SWAP70Q9UH65 585 aa9.44□□□□□ -0.9
AP001042.1-201ENST00000416842 SAP30BPQ9UHR5 308 aaKnown RBP9.44□□□□□ -0.9
AP001042.1-201ENST00000416842 MTMR6Q9Y217 621 aa9.44□□□□□ -0.9
AP001042.1-201ENST00000416842 BAZ2AQ9UIF9 1905 aaKnown RBP9.43□□□□□ -0.9
AP001042.1-201ENST00000416842 TNKSO95271 1327 aa9.43□□□□□ -0.9
AP001042.1-201ENST00000416842 UNCXA6NJT0 531 aa9.43□□□□□ -0.9
AP001042.1-201ENST00000416842 SOX1O00570 391 aaPredicted RBP9.43□□□□□ -0.9
AP001042.1-201ENST00000416842 ZBTB43O43298 467 aa9.43□□□□□ -0.9
AP001042.1-201ENST00000416842 STX6O43752 255 aa9.43□□□□□ -0.9
AP001042.1-201ENST00000416842 DHX16O60231 1041 aaKnown RBP9.43□□□□□ -0.9
AP001042.1-201ENST00000416842 TBC1D12O60347 775 aa9.43□□□□□ -0.9
AP001042.1-201ENST00000416842 RANBP6O60518 1105 aaKnown RBP9.43□□□□□ -0.9
AP001042.1-201ENST00000416842 JAK2O60674 1132 aa9.43□□□□□ -0.9
AP001042.1-201ENST00000416842 IFNAR1P17181 557 aa9.43□□□□□ -0.9
AP001042.1-201ENST00000416842 CDC27P30260 824 aa9.43□□□□□ -0.9
AP001042.1-201ENST00000416842 ADD1P35611 737 aaKnown RBP9.43□□□□□ -0.9
AP001042.1-201ENST00000416842 HMGN5P82970 282 aaKnown RBP9.43□□□□□ -0.9
AP001042.1-201ENST00000416842 FGD1P98174 961 aa9.43□□□□□ -0.9
AP001042.1-201ENST00000416842 WTAPQ15007 396 aa9.43□□□□□ -0.9
AP001042.1-201ENST00000416842 SART3Q15020 963 aaKnown RBP9.43□□□□□ -0.9
AP001042.1-201ENST00000416842 DLGAP5Q15398 846 aa9.43□□□□□ -0.9
AP001042.1-201ENST00000416842 NFKBIBQ15653 356 aa9.43□□□□□ -0.9
AP001042.1-201ENST00000416842 FAM47AQ5JRC9 791 aa9.43□□□□□ -0.9
AP001042.1-201ENST00000416842 FAM83AQ86UY5 434 aa9.43□□□□□ -0.9
AP001042.1-201ENST00000416842 IQCA1Q86XH1 822 aa9.43□□□□□ -0.9
AP001042.1-201ENST00000416842 AMOTL1Q8IY63 956 aa9.43□□□□□ -0.9
AP001042.1-201ENST00000416842 FANCBQ8NB91 859 aa9.43□□□□□ -0.9
AP001042.1-201ENST00000416842 SLC44A5Q8NCS7 719 aa9.43□□□□□ -0.9
AP001042.1-201ENST00000416842 FAM151AQ8WW52 585 aa9.43□□□□□ -0.9
AP001042.1-201ENST00000416842 DPF3Q92784 378 aa9.43□□□□□ -0.9
AP001042.1-201ENST00000416842 MS4A4AQ96JQ5 239 aa9.43□□□□□ -0.9
AP001042.1-201ENST00000416842 TDRD3Q9H7E2 651 aaKnown RBP9.43□□□□□ -0.9
AP001042.1-201ENST00000416842 DNAJC18Q9H819 358 aa9.43□□□□□ -0.9
AP001042.1-201ENST00000416842 NCOA5Q9HCD5 579 aaKnown RBP9.43□□□□□ -0.9
AP001042.1-201ENST00000416842 PI4KBQ9UBF8 816 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms