RNA–Protein interactions for RNA: ENST00000416004.1

CHRNA1-206, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2

Gene CHRNA1, Length 1,879 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-206ENST00000416004 DDIT3P35638 169 aa10.84□□□□□ -0.67
CHRNA1-206ENST00000416004 PRMT2P55345 433 aa10.84□□□□□ -0.67
CHRNA1-206ENST00000416004 ST3GAL1Q11201 340 aa10.84□□□□□ -0.67
CHRNA1-206ENST00000416004 SPP2Q13103 211 aa10.84□□□□□ -0.67
CHRNA1-206ENST00000416004 SLC4A8Q2Y0W8 1093 aa10.84□□□□□ -0.67
CHRNA1-206ENST00000416004 GIMAP6Q6P9H5 292 aa10.84□□□□□ -0.67
CHRNA1-206ENST00000416004 Q6ZUG5 572 aa10.84□□□□□ -0.67
CHRNA1-206ENST00000416004 OTOP1Q7RTM1 612 aa10.84□□□□□ -0.67
CHRNA1-206ENST00000416004 TPCN1Q9ULQ1 816 aa10.84□□□□□ -0.67
CHRNA1-206ENST00000416004 LIMCH1Q9UPQ0 1083 aa10.84□□□□□ -0.67
CHRNA1-206ENST00000416004 AGTPBP1Q9UPW5 1226 aa10.84□□□□□ -0.67
CHRNA1-206ENST00000416004 HPS5Q9UPZ3 1129 aa10.84□□□□□ -0.67
CHRNA1-206ENST00000416004 B4E1Z4 1266 aa10.83□□□□□ -0.68
CHRNA1-206ENST00000416004 DTNBO60941 627 aa10.83□□□□□ -0.68
CHRNA1-206ENST00000416004 HMGB1P09429 215 aaKnown RBP10.83□□□□□ -0.68
CHRNA1-206ENST00000416004 CUL4AQ13619 759 aa10.83□□□□□ -0.68
CHRNA1-206ENST00000416004 ME3Q16798 604 aa10.83□□□□□ -0.68
CHRNA1-206ENST00000416004 CERKLQ49MI3 558 aaPredicted RBP10.83□□□□□ -0.68
CHRNA1-206ENST00000416004 CYB5R4Q7L1T6 521 aa10.83□□□□□ -0.68
CHRNA1-206ENST00000416004 NCOA7Q8NI08 942 aa10.83□□□□□ -0.68
CHRNA1-206ENST00000416004 FEZ1Q99689 392 aa10.83□□□□□ -0.68
CHRNA1-206ENST00000416004 ANAPC4Q9UJX5 808 aa10.83□□□□□ -0.68
CHRNA1-206ENST00000416004 LAMA4Q16363 1823 aa10.83□□□□□ -0.68
CHRNA1-206ENST00000416004 USP17L10C9JJH3 530 aa10.83□□□□□ -0.68
CHRNA1-206ENST00000416004 PRC1O43663 620 aa10.83□□□□□ -0.68
CHRNA1-206ENST00000416004 GDF11O95390 407 aa10.83□□□□□ -0.68
CHRNA1-206ENST00000416004 FMNL1O95466 1100 aaPredicted RBP10.83□□□□□ -0.68
CHRNA1-206ENST00000416004 HSP90AA1P07900 732 aaKnown RBP10.83□□□□□ -0.68
CHRNA1-206ENST00000416004 IRX3P78415 501 aaPredicted RBP10.83□□□□□ -0.68
CHRNA1-206ENST00000416004 ABCB5Q2M3G0 1257 aa10.83□□□□□ -0.68
CHRNA1-206ENST00000416004 AKNAD1Q5T1N1 836 aa10.83□□□□□ -0.68
CHRNA1-206ENST00000416004 RALYLQ86SE5 291 aaKnown RBP10.83□□□□□ -0.68
CHRNA1-206ENST00000416004 METTL16Q86W50 562 aaKnown RBP10.83□□□□□ -0.68
CHRNA1-206ENST00000416004 NECAB1Q8N987 351 aa10.83□□□□□ -0.68
CHRNA1-206ENST00000416004 STAG1Q8WVM7 1258 aa10.83□□□□□ -0.68
CHRNA1-206ENST00000416004 BRF1Q92994 677 aa10.83□□□□□ -0.68
CHRNA1-206ENST00000416004 SWAP70Q9UH65 585 aa10.83□□□□□ -0.68
CHRNA1-206ENST00000416004 CPA4Q9UI42 421 aa10.83□□□□□ -0.68
CHRNA1-206ENST00000416004 PTPN22Q9Y2R2 807 aa10.83□□□□□ -0.68
CHRNA1-206ENST00000416004 SIPA1L1O43166 1804 aa10.82□□□□□ -0.68
CHRNA1-206ENST00000416004 MPHOSPH10O00566 681 aaKnown RBP10.82□□□□□ -0.68
CHRNA1-206ENST00000416004 USP14P54578 494 aa10.82□□□□□ -0.68
CHRNA1-206ENST00000416004 HMGCS2P54868 508 aa10.82□□□□□ -0.68
CHRNA1-206ENST00000416004 FCGRTP55899 365 aa10.82□□□□□ -0.68
CHRNA1-206ENST00000416004 LACTBP83111 547 aaPredicted RBP10.82□□□□□ -0.68
CHRNA1-206ENST00000416004 WDR18Q9BV38 432 aa10.82□□□□□ -0.68
CHRNA1-206ENST00000416004 AGXT2Q9BYV1 514 aa10.82□□□□□ -0.68
CHRNA1-206ENST00000416004 ZBTB21Q9ULJ3 1066 aa10.82□□□□□ -0.68
CHRNA1-206ENST00000416004 LOC285556D6RIA3 1793 aa10.81□□□□□ -0.68
CHRNA1-206ENST00000416004 KDM4AO75164 1064 aa10.81□□□□□ -0.68
CHRNA1-206ENST00000416004 MCM5P33992 734 aa10.81□□□□□ -0.68
CHRNA1-206ENST00000416004 GCLCP48506 637 aaPredicted RBP10.81□□□□□ -0.68
CHRNA1-206ENST00000416004 MLLT1Q03111 559 aaPredicted RBP10.81□□□□□ -0.68
CHRNA1-206ENST00000416004 RAB3GAP1Q15042 981 aa10.81□□□□□ -0.68
CHRNA1-206ENST00000416004 ANKRD1Q15327 319 aa10.81□□□□□ -0.68
CHRNA1-206ENST00000416004 SLC9C1Q4G0N8 1177 aa10.81□□□□□ -0.68
CHRNA1-206ENST00000416004 SBK1Q52WX2 424 aa10.81□□□□□ -0.68
CHRNA1-206ENST00000416004 RRP12Q5JTH9 1297 aaKnown RBP10.81□□□□□ -0.68
CHRNA1-206ENST00000416004 C17orf99Q6UX52 265 aa10.81□□□□□ -0.68
CHRNA1-206ENST00000416004 MFSD6Q6ZSS7 791 aa10.81□□□□□ -0.68
CHRNA1-206ENST00000416004 CCAR1Q8IX12 1150 aaKnown RBP10.81□□□□□ -0.68
CHRNA1-206ENST00000416004 ZNF287Q9HBT7 754 aa10.81□□□□□ -0.68
CHRNA1-206ENST00000416004 ARPP21Q9UBL0 812 aaPredicted RBP10.81□□□□□ -0.68
CHRNA1-206ENST00000416004 MGAMO43451 1857 aa10.81□□□□□ -0.68
CHRNA1-206ENST00000416004 PRDM1O75626 825 aa10.81□□□□□ -0.68
CHRNA1-206ENST00000416004 GH2P01242 217 aa10.81□□□□□ -0.68
CHRNA1-206ENST00000416004 CYP2C8P10632 490 aa10.81□□□□□ -0.68
CHRNA1-206ENST00000416004 PSMC4P43686 418 aa10.81□□□□□ -0.68
CHRNA1-206ENST00000416004 BACE1P56817 501 aa10.81□□□□□ -0.68
CHRNA1-206ENST00000416004 APOBRQ0VD83 1088 aa10.81□□□□□ -0.68
CHRNA1-206ENST00000416004 TRDNQ13061 729 aa10.81□□□□□ -0.68
CHRNA1-206ENST00000416004 MTMR2Q13614 643 aa10.81□□□□□ -0.68
CHRNA1-206ENST00000416004 C12orf60Q5U649 245 aa10.81□□□□□ -0.68
CHRNA1-206ENST00000416004 TATDN1Q6P1N9 297 aa10.81□□□□□ -0.68
CHRNA1-206ENST00000416004 USP17L2Q6R6M4 530 aa10.81□□□□□ -0.68
CHRNA1-206ENST00000416004 CCDC83Q8IWF9 413 aa10.81□□□□□ -0.68
CHRNA1-206ENST00000416004 RAET1EQ8TD07 263 aa10.81□□□□□ -0.68
CHRNA1-206ENST00000416004 GTF3C2Q8WUA4 911 aaPredicted RBP10.81□□□□□ -0.68
CHRNA1-206ENST00000416004 TMEM106CQ9BVX2 250 aa10.81□□□□□ -0.68
CHRNA1-206ENST00000416004 SH2D4AQ9H788 454 aa10.81□□□□□ -0.68
CHRNA1-206ENST00000416004 SENP2Q9HC62 589 aa10.81□□□□□ -0.68
CHRNA1-206ENST00000416004 ZSWIM5Q9P217 1185 aa10.81□□□□□ -0.68
CHRNA1-206ENST00000416004 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.81□□□□□ -0.68
CHRNA1-206ENST00000416004 BAZ2AQ9UIF9 1905 aaKnown RBP10.8□□□□□ -0.68
CHRNA1-206ENST00000416004 FGRP09769 529 aa10.8□□□□□ -0.68
CHRNA1-206ENST00000416004 SLURP2P0DP57 97 aa10.8□□□□□ -0.68
CHRNA1-206ENST00000416004 PLCD1P51178 756 aa10.8□□□□□ -0.68
CHRNA1-206ENST00000416004 FGD1P98174 961 aa10.8□□□□□ -0.68
CHRNA1-206ENST00000416004 STK3Q13188 491 aa10.8□□□□□ -0.68
CHRNA1-206ENST00000416004 SH3D19Q5HYK7 790 aa10.8□□□□□ -0.68
CHRNA1-206ENST00000416004 GPAT2Q6NUI2 795 aa10.8□□□□□ -0.68
CHRNA1-206ENST00000416004 CCDC84Q86UT8 332 aaPredicted RBP10.8□□□□□ -0.68
CHRNA1-206ENST00000416004 FBXL16Q8N461 479 aa10.8□□□□□ -0.68
CHRNA1-206ENST00000416004 DYNLL2Q96FJ2 89 aa10.8□□□□□ -0.68
CHRNA1-206ENST00000416004 CWC22Q9HCG8 908 aaKnown RBP10.8□□□□□ -0.68
CHRNA1-206ENST00000416004 TOMM22Q9NS69 142 aa10.8□□□□□ -0.68
CHRNA1-206ENST00000416004 SLC3A2P08195 630 aaKnown RBP10.79□□□□□ -0.68
CHRNA1-206ENST00000416004 MOGSQ13724 837 aa10.79□□□□□ -0.68
CHRNA1-206ENST00000416004 SLC44A5Q8NCS7 719 aa10.79□□□□□ -0.68
CHRNA1-206ENST00000416004 COA7Q96BR5 231 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms