RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 PRKAG2Q9UGJ0 569 aa18.69■□□□□ 0.58
DDX56-202ENST00000415758 LTBP2Q14767 1821 aa18.69■□□□□ 0.58
DDX56-202ENST00000415758 SEPT4O43236 478 aa18.68■□□□□ 0.58
DDX56-202ENST00000415758 RLBP1P12271 317 aa18.68■□□□□ 0.58
DDX56-202ENST00000415758 SNX17Q15036 470 aa18.68■□□□□ 0.58
DDX56-202ENST00000415758 CEP85Q6P2H3 762 aa18.68■□□□□ 0.58
DDX56-202ENST00000415758 SLC39A5Q6ZMH5 540 aa18.68■□□□□ 0.58
DDX56-202ENST00000415758 FTSJ3Q8IY81 847 aaKnown RBP18.68■□□□□ 0.58
DDX56-202ENST00000415758 MB21D1Q8N884 522 aa18.68■□□□□ 0.58
DDX56-202ENST00000415758 CRNKL1Q9BZJ0 848 aaKnown RBP18.68■□□□□ 0.58
DDX56-202ENST00000415758 A0A0G2JMZ2 1700 aa18.68■□□□□ 0.58
DDX56-202ENST00000415758 NAV1Q8NEY1 1877 aa18.67■□□□□ 0.58
DDX56-202ENST00000415758 COBLO75128 1261 aa18.67■□□□□ 0.58
DDX56-202ENST00000415758 ERCC3P19447 782 aa18.67■□□□□ 0.58
DDX56-202ENST00000415758 GJC2Q5T442 439 aaPredicted RBP18.67■□□□□ 0.58
DDX56-202ENST00000415758 SLC9C2Q5TAH2 1124 aa18.67■□□□□ 0.58
DDX56-202ENST00000415758 C1orf53Q5VUE5 145 aa18.67■□□□□ 0.58
DDX56-202ENST00000415758 AACSQ86V21 672 aa18.67■□□□□ 0.58
DDX56-202ENST00000415758 ITPRIPQ8IWB1 547 aa18.67■□□□□ 0.58
DDX56-202ENST00000415758 ABRAQ8N0Z2 381 aa18.67■□□□□ 0.58
DDX56-202ENST00000415758 MROH8Q9H579 483 aa18.67■□□□□ 0.58
DDX56-202ENST00000415758 MCM9Q9NXL9 1143 aa18.67■□□□□ 0.58
DDX56-202ENST00000415758 SLC5A4Q9NY91 659 aa18.67■□□□□ 0.58
DDX56-202ENST00000415758 PDE6AP16499 860 aa18.66■□□□□ 0.58
DDX56-202ENST00000415758 DSG3P32926 999 aa18.66■□□□□ 0.58
DDX56-202ENST00000415758 TMEM179Q6ZVK1 233 aa18.66■□□□□ 0.58
DDX56-202ENST00000415758 SIAH1Q8IUQ4 282 aa18.66■□□□□ 0.58
DDX56-202ENST00000415758 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.66■□□□□ 0.58
DDX56-202ENST00000415758 TANGO6Q9C0B7 1094 aa18.66■□□□□ 0.58
DDX56-202ENST00000415758 EXOC6BQ9Y2D4 811 aa18.66■□□□□ 0.58
DDX56-202ENST00000415758 TCRBV5S4A2TA0A5A2 114 aa18.65■□□□□ 0.58
DDX56-202ENST00000415758 KBTBD13C9JR72 458 aa18.65■□□□□ 0.58
DDX56-202ENST00000415758 EVX2Q03828 476 aa18.65■□□□□ 0.58
DDX56-202ENST00000415758 HSP90AB4PQ58FF6 505 aa18.65■□□□□ 0.58
DDX56-202ENST00000415758 KIAA1755Q5JYT7 1200 aa18.65■□□□□ 0.58
DDX56-202ENST00000415758 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.65■□□□□ 0.58
DDX56-202ENST00000415758 COL25A1Q9BXS0 654 aaPredicted RBP18.65■□□□□ 0.58
DDX56-202ENST00000415758 DCP1AQ9NPI6 582 aaPredicted RBP18.65■□□□□ 0.58
DDX56-202ENST00000415758 SWAP70Q9UH65 585 aa18.65■□□□□ 0.58
DDX56-202ENST00000415758 ATP11BQ9Y2G3 1177 aa18.65■□□□□ 0.58
DDX56-202ENST00000415758 TMX2Q9Y320 296 aa18.65■□□□□ 0.58
DDX56-202ENST00000415758 ZNFX1Q9P2E3 1918 aaKnown RBP18.64■□□□□ 0.58
DDX56-202ENST00000415758 MPHOSPH10O00566 681 aaKnown RBP18.64■□□□□ 0.57
DDX56-202ENST00000415758 SHHQ15465 462 aa18.64■□□□□ 0.57
DDX56-202ENST00000415758 ZNF697Q5TEC3 545 aa18.64■□□□□ 0.57
DDX56-202ENST00000415758 RHPN1Q8TCX5 695 aa18.64■□□□□ 0.57
DDX56-202ENST00000415758 ZNF532Q9HCE3 1301 aa18.64■□□□□ 0.57
DDX56-202ENST00000415758 LRRC41Q15345 812 aa18.63■□□□□ 0.57
DDX56-202ENST00000415758 SDR42E1Q8WUS8 393 aa18.63■□□□□ 0.57
DDX56-202ENST00000415758 MAML3Q96JK9 1138 aa18.63■□□□□ 0.57
DDX56-202ENST00000415758 ADAMTS5Q9UNA0 930 aa18.63■□□□□ 0.57
DDX56-202ENST00000415758 VCANP13611 3396 aa18.63■□□□□ 0.57
DDX56-202ENST00000415758 PARP14Q460N5 1801 aa18.63■□□□□ 0.57
DDX56-202ENST00000415758 SMCHD1A6NHR9 2005 aa18.62■□□□□ 0.57
DDX56-202ENST00000415758 FLOT1O75955 427 aa18.62■□□□□ 0.57
DDX56-202ENST00000415758 SLC25A27O95847 323 aa18.62■□□□□ 0.57
DDX56-202ENST00000415758 TRIM60Q495X7 471 aa18.62■□□□□ 0.57
DDX56-202ENST00000415758 PRAMEF19Q5SWL8 479 aa18.62■□□□□ 0.57
DDX56-202ENST00000415758 C9orf50Q5SZB4 431 aa18.62■□□□□ 0.57
DDX56-202ENST00000415758 ANO1Q5XXA6 986 aa18.62■□□□□ 0.57
DDX56-202ENST00000415758 LCORLQ8N3X6 602 aa18.62■□□□□ 0.57
DDX56-202ENST00000415758 SLC44A5Q8NCS7 719 aa18.62■□□□□ 0.57
DDX56-202ENST00000415758 CCDC17Q96LX7 622 aa18.62■□□□□ 0.57
DDX56-202ENST00000415758 FAM161BQ96MY7 647 aa18.62■□□□□ 0.57
DDX56-202ENST00000415758 SH2D4AQ9H788 454 aa18.62■□□□□ 0.57
DDX56-202ENST00000415758 VCPKMTQ9H867 229 aa18.62■□□□□ 0.57
DDX56-202ENST00000415758 ARHGEF10LQ9HCE6 1279 aa18.62■□□□□ 0.57
DDX56-202ENST00000415758 IL1RAPL2Q9NP60 686 aa18.62■□□□□ 0.57
DDX56-202ENST00000415758 NRBP1Q9UHY1 535 aa18.62■□□□□ 0.57
DDX56-202ENST00000415758 EYSQ5T1H1 3165 aa18.61■□□□□ 0.57
DDX56-202ENST00000415758 MYH8P13535 1937 aa18.61■□□□□ 0.57
DDX56-202ENST00000415758 CYP2D6P10635 497 aa18.61■□□□□ 0.57
DDX56-202ENST00000415758 FCER1AP12319 257 aa18.61■□□□□ 0.57
DDX56-202ENST00000415758 ADCYAP1R1P41586 468 aa18.61■□□□□ 0.57
DDX56-202ENST00000415758 SMAD3P84022 425 aaKnown RBP18.61■□□□□ 0.57
DDX56-202ENST00000415758 NCAPG2Q86XI2 1143 aa18.61■□□□□ 0.57
DDX56-202ENST00000415758 CLASRPQ8N2M8 674 aaKnown RBP18.61■□□□□ 0.57
DDX56-202ENST00000415758 BADQ92934 168 aa18.61■□□□□ 0.57
DDX56-202ENST00000415758 ATG4CQ96DT6 458 aa18.61■□□□□ 0.57
DDX56-202ENST00000415758 SEMA6BQ9H3T3 888 aa18.61■□□□□ 0.57
DDX56-202ENST00000415758 PDLIM7Q9NR12 457 aa18.61■□□□□ 0.57
DDX56-202ENST00000415758 ATP8A2Q9NTI2 1148 aa18.61■□□□□ 0.57
DDX56-202ENST00000415758 CDH23Q9H251 3354 aa18.61■□□□□ 0.57
DDX56-202ENST00000415758 TRIM43BA6NCK2 446 aa18.6■□□□□ 0.57
DDX56-202ENST00000415758 GOLIM4O00461 696 aa18.6■□□□□ 0.57
DDX56-202ENST00000415758 WDR46O15213 610 aaKnown RBP18.6■□□□□ 0.57
DDX56-202ENST00000415758 PLS1Q14651 629 aa18.6■□□□□ 0.57
DDX56-202ENST00000415758 TMEM132BQ14DG7 1078 aa18.6■□□□□ 0.57
DDX56-202ENST00000415758 FAM47AQ5JRC9 791 aa18.6■□□□□ 0.57
DDX56-202ENST00000415758 TRIM43Q96BQ3 446 aaPredicted RBP18.6■□□□□ 0.57
DDX56-202ENST00000415758 CDX2Q99626 313 aaPredicted RBP18.6■□□□□ 0.57
DDX56-202ENST00000415758 PRDM5Q9NQX1 630 aaPredicted RBP18.6■□□□□ 0.57
DDX56-202ENST00000415758 PHF24Q9UPV7 400 aa18.6■□□□□ 0.57
DDX56-202ENST00000415758 DIS3Q9Y2L1 958 aaKnown RBP18.6■□□□□ 0.57
DDX56-202ENST00000415758 AKR1B1P15121 316 aa18.59■□□□□ 0.57
DDX56-202ENST00000415758 ICA1Q05084 483 aa18.59■□□□□ 0.57
DDX56-202ENST00000415758 SH3RF1Q7Z6J0 888 aa18.59■□□□□ 0.57
DDX56-202ENST00000415758 SPICE1Q8N0Z3 855 aa18.59■□□□□ 0.57
DDX56-202ENST00000415758 KIF1BPQ96EK5 621 aa18.59■□□□□ 0.57
DDX56-202ENST00000415758 DYNLL2Q96FJ2 89 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms