RNA–Protein interactions for RNA: ENST00000415691.2

HNF4A-204, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 2,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-204ENST00000415691 ZKSCAN1P17029 563 aaPredicted RBP15.15■□□□□ 0.02
HNF4A-204ENST00000415691 USP5P45974 858 aa15.15■□□□□ 0.02
HNF4A-204ENST00000415691 HAND2P61296 217 aa15.15■□□□□ 0.02
HNF4A-204ENST00000415691 PICALMQ13492 652 aa15.15■□□□□ 0.02
HNF4A-204ENST00000415691 ICE2Q659A1 982 aa15.15■□□□□ 0.02
HNF4A-204ENST00000415691 CREB3L3Q68CJ9 461 aa15.15■□□□□ 0.02
HNF4A-204ENST00000415691 DPY19L2Q6NUT2 758 aa15.15■□□□□ 0.02
HNF4A-204ENST00000415691 DDX4Q9NQI0 724 aaKnown RBP15.15■□□□□ 0.02
HNF4A-204ENST00000415691 SCAF8Q9UPN6 1271 aaKnown RBP15.15■□□□□ 0.02
HNF4A-204ENST00000415691 U3KPZ7 1027 aaPredicted RBP15.15■□□□□ 0.02
HNF4A-204ENST00000415691 WNT10BO00744 389 aa15.14■□□□□ 0.01
HNF4A-204ENST00000415691 SLC27A2O14975 620 aa15.14■□□□□ 0.01
HNF4A-204ENST00000415691 CPA1P15085 419 aa15.14■□□□□ 0.01
HNF4A-204ENST00000415691 PSMA5P28066 241 aa15.14■□□□□ 0.01
HNF4A-204ENST00000415691 ADCK5Q3MIX3 580 aa15.14■□□□□ 0.01
HNF4A-204ENST00000415691 FERMT3Q86UX7 667 aa15.14■□□□□ 0.01
HNF4A-204ENST00000415691 ZFPM1Q8IX07 1006 aa15.14■□□□□ 0.01
HNF4A-204ENST00000415691 ZBED3Q96IU2 234 aaPredicted RBP15.14■□□□□ 0.01
HNF4A-204ENST00000415691 MKRN1Q9UHC7 482 aaKnown RBP15.14■□□□□ 0.01
HNF4A-204ENST00000415691 SAP30BPQ9UHR5 308 aaKnown RBP15.14■□□□□ 0.01
HNF4A-204ENST00000415691 CFAP45Q9UL16 551 aa15.14■□□□□ 0.01
HNF4A-204ENST00000415691 TPCN1Q9ULQ1 816 aa15.14■□□□□ 0.01
HNF4A-204ENST00000415691 TBC1D8O95759 1140 aa15.14■□□□□ 0.01
HNF4A-204ENST00000415691 CYP21A2P08686 494 aa15.14■□□□□ 0.01
HNF4A-204ENST00000415691 CYP2D6P10635 497 aa15.14■□□□□ 0.01
HNF4A-204ENST00000415691 OAS2P29728 719 aaKnown RBP15.14■□□□□ 0.01
HNF4A-204ENST00000415691 TDO2P48775 406 aa15.14■□□□□ 0.01
HNF4A-204ENST00000415691 STK11IPQ8N1F8 1099 aa15.14■□□□□ 0.01
HNF4A-204ENST00000415691 MTMR14Q8NCE2 650 aa15.14■□□□□ 0.01
HNF4A-204ENST00000415691 NAT10Q9H0A0 1025 aaKnown RBP15.14■□□□□ 0.01
HNF4A-204ENST00000415691 NAPBQ9H115 298 aa15.14■□□□□ 0.01
HNF4A-204ENST00000415691 DNAI1Q9UI46 699 aa15.14■□□□□ 0.01
HNF4A-204ENST00000415691 TIAM2Q8IVF5 1701 aa15.14■□□□□ 0.01
HNF4A-204ENST00000415691 ASTN2O75129 1339 aaPredicted RBP15.13■□□□□ 0.01
HNF4A-204ENST00000415691 USP17L12C9JPN9 530 aa15.13■□□□□ 0.01
HNF4A-204ENST00000415691 USP17L21D6R901 530 aa15.13■□□□□ 0.01
HNF4A-204ENST00000415691 H7C1D1 291 aa15.13■□□□□ 0.01
HNF4A-204ENST00000415691 POLR3GO15318 223 aaPredicted RBP15.13■□□□□ 0.01
HNF4A-204ENST00000415691 PLCG2P16885 1265 aa15.13■□□□□ 0.01
HNF4A-204ENST00000415691 MMP14P50281 582 aa15.13■□□□□ 0.01
HNF4A-204ENST00000415691 COL9A3Q14050 684 aaPredicted RBP15.13■□□□□ 0.01
HNF4A-204ENST00000415691 ALX1Q15699 326 aa15.13■□□□□ 0.01
HNF4A-204ENST00000415691 NOM1Q5C9Z4 860 aaKnown RBP15.13■□□□□ 0.01
HNF4A-204ENST00000415691 FAM173BQ6P4H8 233 aa15.13■□□□□ 0.01
HNF4A-204ENST00000415691 PAXIP1Q6ZW49 1069 aaPredicted RBP15.13■□□□□ 0.01
HNF4A-204ENST00000415691 CEP57L1Q8IYX8 460 aa15.13■□□□□ 0.01
HNF4A-204ENST00000415691 LRRN4CLQ8ND94 238 aa15.13■□□□□ 0.01
HNF4A-204ENST00000415691 TRPM4Q8TD43 1214 aa15.13■□□□□ 0.01
HNF4A-204ENST00000415691 ZSCAN16Q9H4T2 348 aaPredicted RBP15.13■□□□□ 0.01
HNF4A-204ENST00000415691 INCENPQ9NQS7 918 aa15.13■□□□□ 0.01
HNF4A-204ENST00000415691 DCAF8L1A6NGE4 600 aa15.12■□□□□ 0.01
HNF4A-204ENST00000415691 GLTPD2A6NH11 291 aa15.12■□□□□ 0.01
HNF4A-204ENST00000415691 IVLP07476 585 aa15.12■□□□□ 0.01
HNF4A-204ENST00000415691 HIRAP54198 1017 aaPredicted RBP15.12■□□□□ 0.01
HNF4A-204ENST00000415691 SMC1AQ14683 1233 aaKnown RBP15.12■□□□□ 0.01
HNF4A-204ENST00000415691 NBPF11Q86T75 865 aa15.12■□□□□ 0.01
HNF4A-204ENST00000415691 NECAB1Q8N987 351 aa15.12■□□□□ 0.01
HNF4A-204ENST00000415691 NACAP1Q9BZK3 213 aa15.12■□□□□ 0.01
HNF4A-204ENST00000415691 ATP8A2Q9NTI2 1148 aa15.12■□□□□ 0.01
HNF4A-204ENST00000415691 MCM9Q9NXL9 1143 aa15.12■□□□□ 0.01
HNF4A-204ENST00000415691 ZNF70Q9UC06 446 aaPredicted RBP15.12■□□□□ 0.01
HNF4A-204ENST00000415691 MINDY4BA8MYZ0 360 aa15.12■□□□□ 0.01
HNF4A-204ENST00000415691 CTDSPL2Q05D32 466 aa15.12■□□□□ 0.01
HNF4A-204ENST00000415691 TCP10Q12799 353 aa15.12■□□□□ 0.01
HNF4A-204ENST00000415691 GPR161Q8N6U8 529 aaKnown RBP15.12■□□□□ 0.01
HNF4A-204ENST00000415691 MNS1Q8NEH6 495 aa15.12■□□□□ 0.01
HNF4A-204ENST00000415691 BPIFA3Q9BQP9 254 aa15.12■□□□□ 0.01
HNF4A-204ENST00000415691 NBPF3Q9H094 633 aa15.12■□□□□ 0.01
HNF4A-204ENST00000415691 TFIP11Q9UBB9 837 aaKnown RBP15.12■□□□□ 0.01
HNF4A-204ENST00000415691 FAM198AQ9UFP1 575 aa15.12■□□□□ 0.01
HNF4A-204ENST00000415691 TACC3Q9Y6A5 838 aa15.12■□□□□ 0.01
HNF4A-204ENST00000415691 FLT1P17948 1338 aa15.12■□□□□ 0.01
HNF4A-204ENST00000415691 RPS6KA5O75582 802 aa15.11■□□□□ 0.01
HNF4A-204ENST00000415691 SFPQP23246 707 aaKnown RBP eCLIP15.11■□□□□ 0.01
HNF4A-204ENST00000415691 GTF2A1P52655 376 aaPredicted RBP15.11■□□□□ 0.01
HNF4A-204ENST00000415691 KIF4BQ2VIQ3 1234 aa15.11■□□□□ 0.01
HNF4A-204ENST00000415691 CC2D1AQ6P1N0 951 aaPredicted RBP15.11■□□□□ 0.01
HNF4A-204ENST00000415691 REXO1L1PQ8IX06 675 aa15.11■□□□□ 0.01
HNF4A-204ENST00000415691 RRP15Q9Y3B9 282 aaKnown RBP15.11■□□□□ 0.01
HNF4A-204ENST00000415691 TCP10L2B9ZVM9 353 aa15.11■□□□□ 0.01
HNF4A-204ENST00000415691 ZNF213O14771 459 aa15.11■□□□□ 0.01
HNF4A-204ENST00000415691 ACTN2P35609 894 aa15.11■□□□□ 0.01
HNF4A-204ENST00000415691 RESTQ13127 1097 aa15.11■□□□□ 0.01
HNF4A-204ENST00000415691 CERS3Q8IU89 383 aa15.11■□□□□ 0.01
HNF4A-204ENST00000415691 C10orf67Q8IYJ2 551 aa15.11■□□□□ 0.01
HNF4A-204ENST00000415691 MSL3Q8N5Y2 521 aaKnown RBP15.11■□□□□ 0.01
HNF4A-204ENST00000415691 POTECB2RU33 542 aa15.1■□□□□ 0.01
HNF4A-204ENST00000415691 PLCD1P51178 756 aa15.1■□□□□ 0.01
HNF4A-204ENST00000415691 IMMTQ16891 758 aaKnown RBP15.1■□□□□ 0.01
HNF4A-204ENST00000415691 JAKMIP3Q5VZ66 844 aa15.1■□□□□ 0.01
HNF4A-204ENST00000415691 STOX1Q6ZVD7 989 aa15.1■□□□□ 0.01
HNF4A-204ENST00000415691 NKX2-3Q8TAU0 364 aa15.1■□□□□ 0.01
HNF4A-204ENST00000415691 VEZTQ9HBM0 779 aa15.1■□□□□ 0.01
HNF4A-204ENST00000415691 SASH3O75995 380 aa15.1■□□□□ 0.01
HNF4A-204ENST00000415691 SLURP2P0DP57 97 aa15.1■□□□□ 0.01
HNF4A-204ENST00000415691 SPDYE2Q495Y8 402 aa15.1■□□□□ 0.01
HNF4A-204ENST00000415691 ATL3Q6DD88 541 aa15.1■□□□□ 0.01
HNF4A-204ENST00000415691 FCHSD1Q86WN1 690 aa15.1■□□□□ 0.01
HNF4A-204ENST00000415691 IDI2Q9BXS1 227 aa15.1■□□□□ 0.01
HNF4A-204ENST00000415691 TRIM66O15016 1216 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms