RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 SEPT4O43236 478 aa11.68□□□□□ -0.54
RFFL-203ENST00000413582 GNAI2P04899 355 aa11.68□□□□□ -0.54
RFFL-203ENST00000413582 GUCY1A2P33402 732 aa11.68□□□□□ -0.54
RFFL-203ENST00000413582 RARSP54136 660 aaKnown RBP11.68□□□□□ -0.54
RFFL-203ENST00000413582 ABCB5Q2M3G0 1257 aa11.68□□□□□ -0.54
RFFL-203ENST00000413582 CCDC158Q5M9N0 1113 aa11.68□□□□□ -0.54
RFFL-203ENST00000413582 C1orf53Q5VUE5 145 aa11.68□□□□□ -0.54
RFFL-203ENST00000413582 ARHGAP45Q92619 1136 aa11.68□□□□□ -0.54
RFFL-203ENST00000413582 ZNF512BQ96KM6 892 aaPredicted RBP11.68□□□□□ -0.54
RFFL-203ENST00000413582 MOV10L1Q9BXT6 1211 aaKnown RBP11.68□□□□□ -0.54
RFFL-203ENST00000413582 ZNFX1Q9P2E3 1918 aaKnown RBP11.68□□□□□ -0.54
RFFL-203ENST00000413582 COBLO75128 1261 aa11.67□□□□□ -0.54
RFFL-203ENST00000413582 CYP7A1P22680 504 aa11.67□□□□□ -0.54
RFFL-203ENST00000413582 ITGB8P26012 769 aa11.67□□□□□ -0.54
RFFL-203ENST00000413582 SHMT1P34896 483 aa11.67□□□□□ -0.54
RFFL-203ENST00000413582 LRRC41Q15345 812 aa11.67□□□□□ -0.54
RFFL-203ENST00000413582 CERKLQ49MI3 558 aaPredicted RBP11.67□□□□□ -0.54
RFFL-203ENST00000413582 FAM47AQ5JRC9 791 aa11.67□□□□□ -0.54
RFFL-203ENST00000413582 DPP9Q86TI2 863 aa11.67□□□□□ -0.54
RFFL-203ENST00000413582 MIGA1Q8NAN2 632 aa11.67□□□□□ -0.54
RFFL-203ENST00000413582 SPATC1LQ9H0A9 340 aa11.67□□□□□ -0.54
RFFL-203ENST00000413582 MYH8P13535 1937 aa11.66□□□□□ -0.54
RFFL-203ENST00000413582 PLXNA1Q9UIW2 1896 aa11.66□□□□□ -0.54
RFFL-203ENST00000413582 TRIM27P14373 513 aa11.66□□□□□ -0.54
RFFL-203ENST00000413582 ERCC3P19447 782 aa11.66□□□□□ -0.54
RFFL-203ENST00000413582 ADCYAP1R1P41586 468 aa11.66□□□□□ -0.54
RFFL-203ENST00000413582 USP5P45974 858 aa11.66□□□□□ -0.54
RFFL-203ENST00000413582 EPHB4P54760 987 aa11.66□□□□□ -0.54
RFFL-203ENST00000413582 POLA2Q14181 598 aa11.66□□□□□ -0.54
RFFL-203ENST00000413582 CERS3Q8IU89 383 aa11.66□□□□□ -0.54
RFFL-203ENST00000413582 USP38Q8NB14 1042 aa11.66□□□□□ -0.54
RFFL-203ENST00000413582 SHCBP1Q8NEM2 672 aa11.66□□□□□ -0.54
RFFL-203ENST00000413582 SYMPKQ92797 1274 aaKnown RBP11.66□□□□□ -0.54
RFFL-203ENST00000413582 FERMT2Q96AC1 680 aa11.66□□□□□ -0.54
RFFL-203ENST00000413582 RNPC3Q96LT9 517 aaKnown RBP11.66□□□□□ -0.54
RFFL-203ENST00000413582 TLR7Q9NYK1 1049 aaKnown RBP11.66□□□□□ -0.54
RFFL-203ENST00000413582 TNNQ9UQP3 1299 aa11.66□□□□□ -0.54
RFFL-203ENST00000413582 ROBO3Q96MS0 1386 aa11.66□□□□□ -0.54
RFFL-203ENST00000413582 COL11A1P12107 1806 aaPredicted RBP11.65□□□□□ -0.54
RFFL-203ENST00000413582 STRNO43815 780 aa11.65□□□□□ -0.54
RFFL-203ENST00000413582 IDH1O75874 414 aaKnown RBP11.65□□□□□ -0.54
RFFL-203ENST00000413582 TLE2Q04725 743 aa11.65□□□□□ -0.54
RFFL-203ENST00000413582 SEPT2Q15019 361 aa11.65□□□□□ -0.54
RFFL-203ENST00000413582 PRAMEF19Q5SWL8 479 aa11.65□□□□□ -0.54
RFFL-203ENST00000413582 TTC6Q86TZ1 520 aa11.65□□□□□ -0.54
RFFL-203ENST00000413582 MAGEB6Q8N7X4 407 aa11.65□□□□□ -0.54
RFFL-203ENST00000413582 TANGO6Q9C0B7 1094 aa11.65□□□□□ -0.54
RFFL-203ENST00000413582 CABP5Q9NP86 173 aa11.65□□□□□ -0.54
RFFL-203ENST00000413582 DBNLQ9UJU6 430 aaKnown RBP11.65□□□□□ -0.54
RFFL-203ENST00000413582 PHF24Q9UPV7 400 aa11.65□□□□□ -0.54
RFFL-203ENST00000413582 A0A1W2PRG0 241 aa11.64□□□□□ -0.55
RFFL-203ENST00000413582 KIAA0355O15063 1070 aa11.64□□□□□ -0.55
RFFL-203ENST00000413582 CLTBP09497 229 aa11.64□□□□□ -0.55
RFFL-203ENST00000413582 DNAJB2P25686 324 aa11.64□□□□□ -0.55
RFFL-203ENST00000413582 PLCD1P51178 756 aa11.64□□□□□ -0.55
RFFL-203ENST00000413582 GABPAQ06546 454 aa11.64□□□□□ -0.55
RFFL-203ENST00000413582 COG2Q14746 738 aa11.64□□□□□ -0.55
RFFL-203ENST00000413582 GRIN2CQ14957 1233 aa11.64□□□□□ -0.55
RFFL-203ENST00000413582 TJAP1Q5JTD0 557 aa11.64□□□□□ -0.55
RFFL-203ENST00000413582 ABRAQ8N0Z2 381 aa11.64□□□□□ -0.55
RFFL-203ENST00000413582 MAML3Q96JK9 1138 aa11.64□□□□□ -0.55
RFFL-203ENST00000413582 EVX2Q03828 476 aa11.63□□□□□ -0.55
RFFL-203ENST00000413582 OS9Q13438 667 aaPredicted RBP11.63□□□□□ -0.55
RFFL-203ENST00000413582 KIAA1755Q5JYT7 1200 aa11.63□□□□□ -0.55
RFFL-203ENST00000413582 MB21D1Q8N884 522 aa11.63□□□□□ -0.55
RFFL-203ENST00000413582 SSH3Q8TE77 659 aa11.63□□□□□ -0.55
RFFL-203ENST00000413582 RIOK1Q9BRS2 568 aaKnown RBP11.63□□□□□ -0.55
RFFL-203ENST00000413582 MROH8Q9H579 483 aa11.63□□□□□ -0.55
RFFL-203ENST00000413582 XPNPEP3Q9NQH7 507 aa11.63□□□□□ -0.55
RFFL-203ENST00000413582 SLC5A4Q9NY91 659 aa11.63□□□□□ -0.55
RFFL-203ENST00000413582 HOXC10Q9NYD6 342 aa11.63□□□□□ -0.55
RFFL-203ENST00000413582 TACC3Q9Y6A5 838 aa11.63□□□□□ -0.55
RFFL-203ENST00000413582 A0A1W2PQ45 241 aaPredicted RBP11.62□□□□□ -0.55
RFFL-203ENST00000413582 A0A1W2PQY0 241 aa11.62□□□□□ -0.55
RFFL-203ENST00000413582 TNFRSF10AO00220 468 aa11.62□□□□□ -0.55
RFFL-203ENST00000413582 PQBP1O60828 265 aaKnown RBP11.62□□□□□ -0.55
RFFL-203ENST00000413582 COL9A1P20849 921 aa11.62□□□□□ -0.55
RFFL-203ENST00000413582 DSG3P32926 999 aa11.62□□□□□ -0.55
RFFL-203ENST00000413582 FPGSQ05932 587 aa11.62□□□□□ -0.55
RFFL-203ENST00000413582 NCAPG2Q86XI2 1143 aa11.62□□□□□ -0.55
RFFL-203ENST00000413582 ATG4CQ96DT6 458 aa11.62□□□□□ -0.55
RFFL-203ENST00000413582 ANTXR1Q9H6X2 564 aa11.62□□□□□ -0.55
RFFL-203ENST00000413582 NRBP1Q9UHY1 535 aa11.62□□□□□ -0.55
RFFL-203ENST00000413582 CHD9Q3L8U1 2897 aa11.62□□□□□ -0.55
RFFL-203ENST00000413582 SURF6O75683 361 aaKnown RBP11.61□□□□□ -0.55
RFFL-203ENST00000413582 FLOT1O75955 427 aa11.61□□□□□ -0.55
RFFL-203ENST00000413582 PGK1P00558 417 aa11.61□□□□□ -0.55
RFFL-203ENST00000413582 POLR3DP05423 398 aaPredicted RBP11.61□□□□□ -0.55
RFFL-203ENST00000413582 RARBP10826 455 aa11.61□□□□□ -0.55
RFFL-203ENST00000413582 RAG1P15918 1043 aa11.61□□□□□ -0.55
RFFL-203ENST00000413582 PLS1Q14651 629 aa11.61□□□□□ -0.55
RFFL-203ENST00000413582 TMED8Q6PL24 325 aaPredicted RBP11.61□□□□□ -0.55
RFFL-203ENST00000413582 CLEC10AQ8IUN9 316 aa11.61□□□□□ -0.55
RFFL-203ENST00000413582 SLC44A5Q8NCS7 719 aa11.61□□□□□ -0.55
RFFL-203ENST00000413582 CLUAP1Q96AJ1 413 aa11.61□□□□□ -0.55
RFFL-203ENST00000413582 LENG1Q96BZ8 264 aaPredicted RBP11.61□□□□□ -0.55
RFFL-203ENST00000413582 EAF2Q96CJ1 260 aaPredicted RBP11.61□□□□□ -0.55
RFFL-203ENST00000413582 CCDC8Q9H0W5 538 aaPredicted RBP11.61□□□□□ -0.55
RFFL-203ENST00000413582 ZNF576Q9H609 170 aa11.61□□□□□ -0.55
RFFL-203ENST00000413582 NOP58Q9Y2X3 529 aaKnown RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms