RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 TRIM32Q13049 653 aa12.15□□□□□ -0.46
NCKIPSD-202ENST00000413374 COG2Q14746 738 aa12.15□□□□□ -0.46
NCKIPSD-202ENST00000413374 FAM47AQ5JRC9 791 aa12.15□□□□□ -0.46
NCKIPSD-202ENST00000413374 VPS53Q5VIR6 699 aa12.15□□□□□ -0.46
NCKIPSD-202ENST00000413374 SLAIN1Q8ND83 568 aa12.15□□□□□ -0.46
NCKIPSD-202ENST00000413374 CHMP4CQ96CF2 233 aa12.15□□□□□ -0.46
NCKIPSD-202ENST00000413374 KANSL2Q9H9L4 492 aa12.15□□□□□ -0.46
NCKIPSD-202ENST00000413374 CLIP2Q9UDT6 1046 aa12.15□□□□□ -0.46
NCKIPSD-202ENST00000413374 MYH1P12882 1939 aa12.15□□□□□ -0.46
NCKIPSD-202ENST00000413374 CDK5RAP2Q96SN8 1893 aa12.14□□□□□ -0.47
NCKIPSD-202ENST00000413374 SPDYE16A6NNV3 312 aaPredicted RBP12.14□□□□□ -0.47
NCKIPSD-202ENST00000413374 NMIQ13287 307 aaPredicted RBP12.14□□□□□ -0.47
NCKIPSD-202ENST00000413374 IRF5Q13568 498 aa12.14□□□□□ -0.47
NCKIPSD-202ENST00000413374 PLS1Q14651 629 aa12.14□□□□□ -0.47
NCKIPSD-202ENST00000413374 GPR142Q7Z601 462 aa12.14□□□□□ -0.47
NCKIPSD-202ENST00000413374 GTF3C2Q8WUA4 911 aaPredicted RBP12.14□□□□□ -0.47
NCKIPSD-202ENST00000413374 VCPKMTQ9H867 229 aa12.14□□□□□ -0.47
NCKIPSD-202ENST00000413374 HOXC10Q9NYD6 342 aa12.14□□□□□ -0.47
NCKIPSD-202ENST00000413374 RABGAP1Q9Y3P9 1069 aa12.14□□□□□ -0.47
NCKIPSD-202ENST00000413374 FOCADQ5VW36 1801 aa12.14□□□□□ -0.47
NCKIPSD-202ENST00000413374 A0A0D9SFI3 127 aa12.13□□□□□ -0.47
NCKIPSD-202ENST00000413374 FOXP2O15409 715 aa12.13□□□□□ -0.47
NCKIPSD-202ENST00000413374 FLOT1O75955 427 aa12.13□□□□□ -0.47
NCKIPSD-202ENST00000413374 MAPK4P31152 587 aa12.13□□□□□ -0.47
NCKIPSD-202ENST00000413374 DSG3P32926 999 aa12.13□□□□□ -0.47
NCKIPSD-202ENST00000413374 PPARAQ07869 468 aa12.13□□□□□ -0.47
NCKIPSD-202ENST00000413374 MCMDC2Q4G0Z9 681 aa12.13□□□□□ -0.47
NCKIPSD-202ENST00000413374 PLEKHH3Q7Z736 793 aa12.13□□□□□ -0.47
NCKIPSD-202ENST00000413374 PXYLP1Q8TE99 480 aa12.13□□□□□ -0.47
NCKIPSD-202ENST00000413374 ATG4CQ96DT6 458 aa12.13□□□□□ -0.47
NCKIPSD-202ENST00000413374 NUP88Q99567 741 aaPredicted RBP12.13□□□□□ -0.47
NCKIPSD-202ENST00000413374 NUDT12Q9BQG2 462 aa12.13□□□□□ -0.47
NCKIPSD-202ENST00000413374 SH2D4AQ9H788 454 aa12.13□□□□□ -0.47
NCKIPSD-202ENST00000413374 HELLSQ9NRZ9 838 aa12.13□□□□□ -0.47
NCKIPSD-202ENST00000413374 FBXO28Q9NVF7 368 aa12.13□□□□□ -0.47
NCKIPSD-202ENST00000413374 TFRCP02786 760 aaKnown RBP12.12□□□□□ -0.47
NCKIPSD-202ENST00000413374 SLC3A2P08195 630 aaKnown RBP12.12□□□□□ -0.47
NCKIPSD-202ENST00000413374 SDSP20132 328 aa12.12□□□□□ -0.47
NCKIPSD-202ENST00000413374 TFAP4Q01664 338 aa12.12□□□□□ -0.47
NCKIPSD-202ENST00000413374 CCL14Q16627 93 aa12.12□□□□□ -0.47
NCKIPSD-202ENST00000413374 FAM83BQ5T0W9 1011 aa12.12□□□□□ -0.47
NCKIPSD-202ENST00000413374 ZNF589Q86UQ0 364 aaPredicted RBP12.12□□□□□ -0.47
NCKIPSD-202ENST00000413374 DEFB118Q96PH6 123 aa12.12□□□□□ -0.47
NCKIPSD-202ENST00000413374 GOPCQ9HD26 462 aa12.12□□□□□ -0.47
NCKIPSD-202ENST00000413374 TACC3Q9Y6A5 838 aa12.12□□□□□ -0.47
NCKIPSD-202ENST00000413374 HTTP42858 3142 aa12.12□□□□□ -0.47
NCKIPSD-202ENST00000413374 ATAD5Q96QE3 1844 aa12.11□□□□□ -0.47
NCKIPSD-202ENST00000413374 NAV1Q8NEY1 1877 aa12.11□□□□□ -0.47
NCKIPSD-202ENST00000413374 F5H6K3 240 aa12.11□□□□□ -0.47
NCKIPSD-202ENST00000413374 GJB1P08034 283 aa12.11□□□□□ -0.47
NCKIPSD-202ENST00000413374 TSPY3P0CV98 308 aa12.11□□□□□ -0.47
NCKIPSD-202ENST00000413374 TSPY8P0CW00 308 aa12.11□□□□□ -0.47
NCKIPSD-202ENST00000413374 PDE4AP27815 886 aa12.11□□□□□ -0.47
NCKIPSD-202ENST00000413374 SLC4A3P48751 1232 aa12.11□□□□□ -0.47
NCKIPSD-202ENST00000413374 CCNA1P78396 465 aa12.11□□□□□ -0.47
NCKIPSD-202ENST00000413374 PDE4BQ07343 736 aa12.11□□□□□ -0.47
NCKIPSD-202ENST00000413374 KLRC3Q07444 240 aa12.11□□□□□ -0.47
NCKIPSD-202ENST00000413374 MORN1Q5T089 497 aa12.11□□□□□ -0.47
NCKIPSD-202ENST00000413374 LBX2Q6XYB7 198 aa12.11□□□□□ -0.47
NCKIPSD-202ENST00000413374 U2AF1L4Q8WU68 220 aaKnown RBP12.11□□□□□ -0.47
NCKIPSD-202ENST00000413374 TRIB2Q92519 343 aa12.11□□□□□ -0.47
NCKIPSD-202ENST00000413374 LPAR1Q92633 364 aa12.11□□□□□ -0.47
NCKIPSD-202ENST00000413374 SHISA4Q96DD7 197 aa12.11□□□□□ -0.47
NCKIPSD-202ENST00000413374 CEP95Q96GE4 821 aa12.11□□□□□ -0.47
NCKIPSD-202ENST00000413374 MOV10L1Q9BXT6 1211 aaKnown RBP12.11□□□□□ -0.47
NCKIPSD-202ENST00000413374 OSBPL3Q9H4L5 887 aa12.11□□□□□ -0.47
NCKIPSD-202ENST00000413374 ZNF287Q9HBT7 754 aa12.11□□□□□ -0.47
NCKIPSD-202ENST00000413374 TOMM22Q9NS69 142 aa12.11□□□□□ -0.47
NCKIPSD-202ENST00000413374 IGKV6D-41A0A0C4DH26 115 aa12.1□□□□□ -0.47
NCKIPSD-202ENST00000413374 WDR46O15213 610 aaKnown RBP12.1□□□□□ -0.47
NCKIPSD-202ENST00000413374 SGPL1O95470 568 aa12.1□□□□□ -0.47
NCKIPSD-202ENST00000413374 FGAP02671 866 aa12.1□□□□□ -0.47
NCKIPSD-202ENST00000413374 HMGCRP04035 888 aa12.1□□□□□ -0.47
NCKIPSD-202ENST00000413374 HSPD1P10809 573 aaKnown RBP12.1□□□□□ -0.47
NCKIPSD-202ENST00000413374 ERCC3P19447 782 aa12.1□□□□□ -0.47
NCKIPSD-202ENST00000413374 PTPREP23469 700 aa12.1□□□□□ -0.47
NCKIPSD-202ENST00000413374 RGS2P41220 211 aa12.1□□□□□ -0.47
NCKIPSD-202ENST00000413374 GJA8P48165 433 aa12.1□□□□□ -0.47
NCKIPSD-202ENST00000413374 HAND2P61296 217 aa12.1□□□□□ -0.47
NCKIPSD-202ENST00000413374 MAP2K5Q13163 448 aa12.1□□□□□ -0.47
NCKIPSD-202ENST00000413374 RRP12Q5JTH9 1297 aaKnown RBP12.1□□□□□ -0.47
NCKIPSD-202ENST00000413374 CWC27Q6UX04 472 aaKnown RBP12.1□□□□□ -0.47
NCKIPSD-202ENST00000413374 NCAPG2Q86XI2 1143 aa12.1□□□□□ -0.47
NCKIPSD-202ENST00000413374 LRRC47Q8N1G4 583 aaKnown RBP12.1□□□□□ -0.47
NCKIPSD-202ENST00000413374 SOCS4Q8WXH5 440 aa12.1□□□□□ -0.47
NCKIPSD-202ENST00000413374 USP6NLQ92738 828 aa12.1□□□□□ -0.47
NCKIPSD-202ENST00000413374 SPATC1LQ9H0A9 340 aa12.1□□□□□ -0.47
NCKIPSD-202ENST00000413374 NYAP2Q9P242 653 aa12.1□□□□□ -0.47
NCKIPSD-202ENST00000413374 ISY1Q9ULR0 285 aaKnown RBP12.1□□□□□ -0.47
NCKIPSD-202ENST00000413374 MTMR7Q9Y216 660 aa12.1□□□□□ -0.47
NCKIPSD-202ENST00000413374 DDX60LQ5H9U9 1706 aaKnown RBP12.1□□□□□ -0.47
NCKIPSD-202ENST00000413374 LOC285556D6RIA3 1793 aa12.1□□□□□ -0.47
NCKIPSD-202ENST00000413374 PTPRFP10586 1907 aa12.09□□□□□ -0.47
NCKIPSD-202ENST00000413374 CENPFP49454 3210 aa12.09□□□□□ -0.47
NCKIPSD-202ENST00000413374 ROBO3Q96MS0 1386 aa12.09□□□□□ -0.47
NCKIPSD-202ENST00000413374 TSPY2A6NKD2 308 aa12.09□□□□□ -0.47
NCKIPSD-202ENST00000413374 RANBP6O60518 1105 aaKnown RBP12.09□□□□□ -0.47
NCKIPSD-202ENST00000413374 NMT2O60551 498 aa12.09□□□□□ -0.47
NCKIPSD-202ENST00000413374 NDUFB10O96000 172 aa12.09□□□□□ -0.47
NCKIPSD-202ENST00000413374 ZKSCAN1P17029 563 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms