RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 RWDD2AQ9UIY3 292 aa19.95■□□□□ 0.78
SDCBP-202ENST00000413219 SHANK3Q9BYB0 1731 aa19.94■□□□□ 0.78
SDCBP-202ENST00000413219 VSNL1P62760 191 aa19.94■□□□□ 0.78
SDCBP-202ENST00000413219 AMPD2Q01433 879 aa19.94■□□□□ 0.78
SDCBP-202ENST00000413219 CASP8Q14790 479 aa19.94■□□□□ 0.78
SDCBP-202ENST00000413219 DNAJC10Q8IXB1 793 aa19.94■□□□□ 0.78
SDCBP-202ENST00000413219 ANKRD20A12PQ8NF67 263 aa19.94■□□□□ 0.78
SDCBP-202ENST00000413219 CDC5LQ99459 802 aaKnown RBP19.94■□□□□ 0.78
SDCBP-202ENST00000413219 RASSF4Q9H2L5 321 aa19.94■□□□□ 0.78
SDCBP-202ENST00000413219 MED4Q9NPJ6 270 aa19.94■□□□□ 0.78
SDCBP-202ENST00000413219 TMOD3Q9NYL9 352 aa19.94■□□□□ 0.78
SDCBP-202ENST00000413219 IQSEC3Q9UPP2 1182 aaPredicted RBP19.94■□□□□ 0.78
SDCBP-202ENST00000413219 SLC4A4Q9Y6R1 1079 aa19.94■□□□□ 0.78
SDCBP-202ENST00000413219 BCORQ6W2J9 1755 aa19.94■□□□□ 0.78
SDCBP-202ENST00000413219 N4BP3O15049 544 aa19.93■□□□□ 0.78
SDCBP-202ENST00000413219 PRPF3O43395 683 aaKnown RBP19.93■□□□□ 0.78
SDCBP-202ENST00000413219 RASGRF1Q13972 1273 aa19.93■□□□□ 0.78
SDCBP-202ENST00000413219 SEC23AQ15436 765 aa19.93■□□□□ 0.78
SDCBP-202ENST00000413219 NUP133Q8WUM0 1156 aa19.93■□□□□ 0.78
SDCBP-202ENST00000413219 MYO6Q9UM54 1294 aa19.93■□□□□ 0.78
SDCBP-202ENST00000413219 CTNND2Q9UQB3 1225 aa19.93■□□□□ 0.78
SDCBP-202ENST00000413219 ANKRD36CQ5JPF3 1778 aa19.93■□□□□ 0.78
SDCBP-202ENST00000413219 MYO1CO00159 1063 aa19.93■□□□□ 0.78
SDCBP-202ENST00000413219 GPTP24298 496 aa19.93■□□□□ 0.78
SDCBP-202ENST00000413219 COPB1P53618 953 aaKnown RBP19.93■□□□□ 0.78
SDCBP-202ENST00000413219 PKN1Q16512 942 aa19.93■□□□□ 0.78
SDCBP-202ENST00000413219 HLFQ16534 295 aa19.93■□□□□ 0.78
SDCBP-202ENST00000413219 HSP90B2PQ58FF3 399 aa19.93■□□□□ 0.78
SDCBP-202ENST00000413219 SRLQ86TD4 932 aa19.93■□□□□ 0.78
SDCBP-202ENST00000413219 CMTR1Q8N1G2 835 aaKnown RBP19.93■□□□□ 0.78
SDCBP-202ENST00000413219 LCORLQ8N3X6 602 aa19.93■□□□□ 0.78
SDCBP-202ENST00000413219 VIPAS39Q9H9C1 493 aa19.93■□□□□ 0.78
SDCBP-202ENST00000413219 DISP2A7MBM2 1401 aa19.92■□□□□ 0.78
SDCBP-202ENST00000413219 COL22A1Q8NFW1 1626 aaPredicted RBP19.92■□□□□ 0.78
SDCBP-202ENST00000413219 PRKAB2O43741 272 aa19.92■□□□□ 0.78
SDCBP-202ENST00000413219 SHISA4Q96DD7 197 aa19.92■□□□□ 0.78
SDCBP-202ENST00000413219 CARD10Q9BWT7 1032 aa19.92■□□□□ 0.78
SDCBP-202ENST00000413219 BRMS1Q9HCU9 246 aa19.92■□□□□ 0.78
SDCBP-202ENST00000413219 ANAPC4Q9UJX5 808 aa19.92■□□□□ 0.78
SDCBP-202ENST00000413219 FAM205CA6NFA0 338 aa19.91■□□□□ 0.78
SDCBP-202ENST00000413219 RHOXF2BP0C7M4 288 aa19.91■□□□□ 0.78
SDCBP-202ENST00000413219 FUT2Q10981 343 aa19.91■□□□□ 0.78
SDCBP-202ENST00000413219 RHOXF2Q9BQY4 288 aa19.91■□□□□ 0.78
SDCBP-202ENST00000413219 TRMT112Q9UI30 125 aaKnown RBP19.91■□□□□ 0.78
SDCBP-202ENST00000413219 FAN1Q9Y2M0 1017 aa19.91■□□□□ 0.78
SDCBP-202ENST00000413219 COL5A2P05997 1499 aaPredicted RBP19.91■□□□□ 0.78
SDCBP-202ENST00000413219 MCM3P25205 808 aa19.91■□□□□ 0.78
SDCBP-202ENST00000413219 CASP1P29466 404 aa19.91■□□□□ 0.78
SDCBP-202ENST00000413219 ATP2C1P98194 919 aaPredicted RBP19.91■□□□□ 0.78
SDCBP-202ENST00000413219 PPARAQ07869 468 aa19.91■□□□□ 0.78
SDCBP-202ENST00000413219 E2F4Q16254 413 aa19.91■□□□□ 0.78
SDCBP-202ENST00000413219 SMYD4Q8IYR2 804 aaPredicted RBP19.91■□□□□ 0.78
SDCBP-202ENST00000413219 ESR2Q92731 530 aa19.91■□□□□ 0.78
SDCBP-202ENST00000413219 NUP88Q99567 741 aaPredicted RBP19.91■□□□□ 0.78
SDCBP-202ENST00000413219 RBM28Q9NW13 759 aaKnown RBP19.91■□□□□ 0.78
SDCBP-202ENST00000413219 VPS54Q9P1Q0 977 aa19.91■□□□□ 0.78
SDCBP-202ENST00000413219 TOGARAM1Q9Y4F4 1720 aa19.91■□□□□ 0.78
SDCBP-202ENST00000413219 GTPBP6O43824 516 aaPredicted RBP19.9■□□□□ 0.78
SDCBP-202ENST00000413219 CCT6AP40227 531 aaKnown RBP19.9■□□□□ 0.78
SDCBP-202ENST00000413219 PAK1Q13153 545 aa19.9■□□□□ 0.78
SDCBP-202ENST00000413219 EARS2Q5JPH6 523 aaKnown RBP19.9■□□□□ 0.78
SDCBP-202ENST00000413219 TNFRSF25Q93038 417 aa19.9■□□□□ 0.78
SDCBP-202ENST00000413219 PRDM11Q9NQV5 511 aa19.9■□□□□ 0.78
SDCBP-202ENST00000413219 MKRN1Q9UHC7 482 aaKnown RBP19.9■□□□□ 0.78
SDCBP-202ENST00000413219 RRP15Q9Y3B9 282 aaKnown RBP19.9■□□□□ 0.78
SDCBP-202ENST00000413219 XDHP47989 1333 aa19.9■□□□□ 0.78
SDCBP-202ENST00000413219 PLCH1Q4KWH8 1693 aa19.9■□□□□ 0.78
SDCBP-202ENST00000413219 MYH6P13533 1939 aa19.9■□□□□ 0.78
SDCBP-202ENST00000413219 TNKSO95271 1327 aa19.9■□□□□ 0.78
SDCBP-202ENST00000413219 TCP11X2Q5H9J9 407 aa19.9■□□□□ 0.78
SDCBP-202ENST00000413219 TTC38Q5R3I4 469 aa19.9■□□□□ 0.78
SDCBP-202ENST00000413219 RRAGBQ5VZM2 374 aa19.9■□□□□ 0.78
SDCBP-202ENST00000413219 CCDC148Q8NFR7 591 aa19.9■□□□□ 0.78
SDCBP-202ENST00000413219 RMND1Q9NWS8 449 aa19.9■□□□□ 0.78
SDCBP-202ENST00000413219 PSMD14O00487 310 aa19.89■□□□□ 0.77
SDCBP-202ENST00000413219 N4BP1O75113 896 aaKnown RBP19.89■□□□□ 0.77
SDCBP-202ENST00000413219 KRT9P35527 623 aa19.89■□□□□ 0.77
SDCBP-202ENST00000413219 CTCFLQ8NI51 663 aaPredicted RBP19.89■□□□□ 0.77
SDCBP-202ENST00000413219 TRIM34Q9BYJ4 488 aa19.89■□□□□ 0.77
SDCBP-202ENST00000413219 HAUS4Q9H6D7 363 aa19.89■□□□□ 0.77
SDCBP-202ENST00000413219 SUGCTQ9HAC7 445 aa19.89■□□□□ 0.77
SDCBP-202ENST00000413219 KCNJ18B7U540 433 aa19.88■□□□□ 0.77
SDCBP-202ENST00000413219 AARSP49588 968 aaKnown RBP eCLIP19.88■□□□□ 0.77
SDCBP-202ENST00000413219 KCNJ12Q14500 433 aa19.88■□□□□ 0.77
SDCBP-202ENST00000413219 ZNF658Q5TYW1 1059 aaPredicted RBP19.88■□□□□ 0.77
SDCBP-202ENST00000413219 PDXDC2PQ6P474 469 aa19.88■□□□□ 0.77
SDCBP-202ENST00000413219 TRAPPC11Q7Z392 1133 aa19.88■□□□□ 0.77
SDCBP-202ENST00000413219 CADPS2Q86UW7 1296 aa19.88■□□□□ 0.77
SDCBP-202ENST00000413219 NOA1Q8NC60 698 aaKnown RBP19.88■□□□□ 0.77
SDCBP-202ENST00000413219 EPN1Q9Y6I3 576 aaPredicted RBP19.88■□□□□ 0.77
SDCBP-202ENST00000413219 NDUFA10O95299 355 aa19.88■□□□□ 0.77
SDCBP-202ENST00000413219 ABL1P00519 1130 aa19.88■□□□□ 0.77
SDCBP-202ENST00000413219 CALM1P0DP23 149 aa19.88■□□□□ 0.77
SDCBP-202ENST00000413219 CALM2P0DP24 149 aa19.88■□□□□ 0.77
SDCBP-202ENST00000413219 CALM3P0DP25 149 aa19.88■□□□□ 0.77
SDCBP-202ENST00000413219 TRAPPC10P48553 1259 aa19.88■□□□□ 0.77
SDCBP-202ENST00000413219 ZNF662Q6ZS27 426 aa19.88■□□□□ 0.77
SDCBP-202ENST00000413219 HELBQ8NG08 1087 aaPredicted RBP19.88■□□□□ 0.77
SDCBP-202ENST00000413219 RPGRIP1Q96KN7 1286 aa19.88■□□□□ 0.77
SDCBP-202ENST00000413219 SLF1Q9BQI6 1058 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms