RNA–Protein interactions for RNA: ENST00000411934.6

RPE-204, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 1 (best) BASIC

Gene RPE, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-204ENST00000411934 USP17L13C9JLJ4 530 aa9.71□□□□□ -0.86
RPE-204ENST00000411934 USP17L11C9JVI0 530 aa9.71□□□□□ -0.86
RPE-204ENST00000411934 USP17L18D6R9N7 530 aa9.71□□□□□ -0.86
RPE-204ENST00000411934 USP17L22D6RA61 530 aa9.71□□□□□ -0.86
RPE-204ENST00000411934 USP17L17D6RBQ6 530 aa9.71□□□□□ -0.86
RPE-204ENST00000411934 USP17L19D6RCP7 530 aa9.71□□□□□ -0.86
RPE-204ENST00000411934 USP17L20D6RJB6 530 aa9.71□□□□□ -0.86
RPE-204ENST00000411934 SMIM22K7EJ46 135 aa9.71□□□□□ -0.86
RPE-204ENST00000411934 FKTNO75072 461 aa9.71□□□□□ -0.86
RPE-204ENST00000411934 REC8O95072 547 aa9.71□□□□□ -0.86
RPE-204ENST00000411934 GNRH1P01148 92 aa9.71□□□□□ -0.86
RPE-204ENST00000411934 EEF2P13639 858 aaKnown RBP9.71□□□□□ -0.86
RPE-204ENST00000411934 VCAM1P19320 739 aa9.71□□□□□ -0.86
RPE-204ENST00000411934 IRX3P78415 501 aaPredicted RBP9.71□□□□□ -0.86
RPE-204ENST00000411934 CTDSPL2Q05D32 466 aa9.71□□□□□ -0.86
RPE-204ENST00000411934 USP17L24Q0WX57 530 aa9.71□□□□□ -0.86
RPE-204ENST00000411934 TRDNQ13061 729 aa9.71□□□□□ -0.86
RPE-204ENST00000411934 FAM110CQ1W6H9 321 aa9.71□□□□□ -0.86
RPE-204ENST00000411934 SHROOM1Q2M3G4 852 aaPredicted RBP9.71□□□□□ -0.86
RPE-204ENST00000411934 RNF20Q5VTR2 975 aa9.71□□□□□ -0.86
RPE-204ENST00000411934 CCDC84Q86UT8 332 aaPredicted RBP9.71□□□□□ -0.86
RPE-204ENST00000411934 TBC1D10CQ8IV04 446 aa9.71□□□□□ -0.86
RPE-204ENST00000411934 GMCL1P1Q8NEA9 526 aa9.71□□□□□ -0.86
RPE-204ENST00000411934 ERO1AQ96HE7 468 aa9.71□□□□□ -0.86
RPE-204ENST00000411934 MTA3Q9BTC8 594 aa9.71□□□□□ -0.86
RPE-204ENST00000411934 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.71□□□□□ -0.86
RPE-204ENST00000411934 LSG1Q9H089 658 aaKnown RBP9.71□□□□□ -0.86
RPE-204ENST00000411934 NBPF3Q9H094 633 aa9.71□□□□□ -0.86
RPE-204ENST00000411934 EMILIN3Q9NT22 766 aa9.71□□□□□ -0.86
RPE-204ENST00000411934 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.71□□□□□ -0.86
RPE-204ENST00000411934 A0A1W2PRG0 241 aa9.7□□□□□ -0.86
RPE-204ENST00000411934 RANBP6O60518 1105 aaKnown RBP9.7□□□□□ -0.86
RPE-204ENST00000411934 PRDM1O75626 825 aa9.7□□□□□ -0.86
RPE-204ENST00000411934 CYP21A2P08686 494 aa9.7□□□□□ -0.86
RPE-204ENST00000411934 BCRP11274 1271 aa9.7□□□□□ -0.86
RPE-204ENST00000411934 LBX1P52954 281 aa9.7□□□□□ -0.86
RPE-204ENST00000411934 TFAP4Q01664 338 aa9.7□□□□□ -0.86
RPE-204ENST00000411934 SP3Q02447 781 aa9.7□□□□□ -0.86
RPE-204ENST00000411934 TREML2Q5T2D2 321 aa9.7□□□□□ -0.86
RPE-204ENST00000411934 C17orf99Q6UX52 265 aa9.7□□□□□ -0.86
RPE-204ENST00000411934 IQCA1Q86XH1 822 aa9.7□□□□□ -0.86
RPE-204ENST00000411934 DGKHQ86XP1 1220 aa9.7□□□□□ -0.86
RPE-204ENST00000411934 SIAH1Q8IUQ4 282 aa9.7□□□□□ -0.86
RPE-204ENST00000411934 MB21D1Q8N884 522 aa9.7□□□□□ -0.86
RPE-204ENST00000411934 ACER1Q8TDN7 264 aa9.7□□□□□ -0.86
RPE-204ENST00000411934 SMCR8Q8TEV9 937 aaPredicted RBP9.7□□□□□ -0.86
RPE-204ENST00000411934 CEP95Q96GE4 821 aa9.7□□□□□ -0.86
RPE-204ENST00000411934 MORF4L1Q9UBU8 362 aa9.7□□□□□ -0.86
RPE-204ENST00000411934 RBM8AQ9Y5S9 174 aaKnown RBP9.7□□□□□ -0.86
RPE-204ENST00000411934 NEDD4P46934 1319 aa9.7□□□□□ -0.86
RPE-204ENST00000411934 PARP14Q460N5 1801 aa9.7□□□□□ -0.86
RPE-204ENST00000411934 PLA2G6O60733 806 aa9.69□□□□□ -0.86
RPE-204ENST00000411934 TBC1D8O95759 1140 aa9.69□□□□□ -0.86
RPE-204ENST00000411934 FDX1P10109 184 aa9.69□□□□□ -0.86
RPE-204ENST00000411934 PRMT2P55345 433 aa9.69□□□□□ -0.86
RPE-204ENST00000411934 HAND2P61296 217 aa9.69□□□□□ -0.86
RPE-204ENST00000411934 PTH1RQ03431 593 aa9.69□□□□□ -0.86
RPE-204ENST00000411934 KIF22Q14807 665 aa9.69□□□□□ -0.86
RPE-204ENST00000411934 NECTIN1Q15223 517 aa9.69□□□□□ -0.86
RPE-204ENST00000411934 PKN2Q16513 984 aaKnown RBP9.69□□□□□ -0.86
RPE-204ENST00000411934 TSGA10IPQ3SY00 556 aa9.69□□□□□ -0.86
RPE-204ENST00000411934 RCSD1Q6JBY9 416 aa9.69□□□□□ -0.86
RPE-204ENST00000411934 CATSPERGQ6ZRH7 1159 aa9.69□□□□□ -0.86
RPE-204ENST00000411934 SKAP1Q86WV1 359 aa9.69□□□□□ -0.86
RPE-204ENST00000411934 ZNF296Q8WUU4 475 aaPredicted RBP9.69□□□□□ -0.86
RPE-204ENST00000411934 GMCL1Q96IK5 515 aa9.69□□□□□ -0.86
RPE-204ENST00000411934 ASCC2Q9H1I8 757 aaPredicted RBP9.69□□□□□ -0.86
RPE-204ENST00000411934 ANO2Q9NQ90 1003 aa9.69□□□□□ -0.86
RPE-204ENST00000411934 TOMM22Q9NS69 142 aa9.69□□□□□ -0.86
RPE-204ENST00000411934 WDR19Q8NEZ3 1342 aa9.68□□□□□ -0.86
RPE-204ENST00000411934 TOP1P11387 765 aaKnown RBP9.68□□□□□ -0.86
RPE-204ENST00000411934 HERVK_113P62684 666 aa9.68□□□□□ -0.86
RPE-204ENST00000411934 KRT32Q14532 448 aa9.68□□□□□ -0.86
RPE-204ENST00000411934 SART3Q15020 963 aaKnown RBP9.68□□□□□ -0.86
RPE-204ENST00000411934 FAM47AQ5JRC9 791 aa9.68□□□□□ -0.86
RPE-204ENST00000411934 CTU1Q7Z7A3 348 aaKnown RBP9.68□□□□□ -0.86
RPE-204ENST00000411934 RALYLQ86SE5 291 aaKnown RBP9.68□□□□□ -0.86
RPE-204ENST00000411934 NCOA7Q8NI08 942 aa9.68□□□□□ -0.86
RPE-204ENST00000411934 ANKS1AQ92625 1134 aa9.68□□□□□ -0.86
RPE-204ENST00000411934 DCBLD2Q96PD2 775 aa9.68□□□□□ -0.86
RPE-204ENST00000411934 RPAP3Q9H6T3 665 aaPredicted RBP9.68□□□□□ -0.86
RPE-204ENST00000411934 IL17RBQ9NRM6 502 aa9.68□□□□□ -0.86
RPE-204ENST00000411934 HOXC10Q9NYD6 342 aa9.68□□□□□ -0.86
RPE-204ENST00000411934 STX8Q9UNK0 236 aa9.68□□□□□ -0.86
RPE-204ENST00000411934 RABGAP1Q9Y3P9 1069 aa9.68□□□□□ -0.86
RPE-204ENST00000411934 TACC3Q9Y6A5 838 aa9.68□□□□□ -0.86
RPE-204ENST00000411934 RLFQ13129 1914 aa9.68□□□□□ -0.86
RPE-204ENST00000411934 SPDYE16A6NNV3 312 aaPredicted RBP9.67□□□□□ -0.86
RPE-204ENST00000411934 E7EWF7 191 aa9.67□□□□□ -0.86
RPE-204ENST00000411934 F5H6K3 240 aa9.67□□□□□ -0.86
RPE-204ENST00000411934 KDM4AO75164 1064 aa9.67□□□□□ -0.86
RPE-204ENST00000411934 CYP2C8P10632 490 aa9.67□□□□□ -0.86
RPE-204ENST00000411934 ZKSCAN1P17029 563 aaPredicted RBP9.67□□□□□ -0.86
RPE-204ENST00000411934 COPB2P35606 906 aa9.67□□□□□ -0.86
RPE-204ENST00000411934 CCNA1P78396 465 aa9.67□□□□□ -0.86
RPE-204ENST00000411934 LACTBP83111 547 aaPredicted RBP9.67□□□□□ -0.86
RPE-204ENST00000411934 ATP2B2Q01814 1243 aa9.67□□□□□ -0.86
RPE-204ENST00000411934 KLRC3Q07444 240 aa9.67□□□□□ -0.86
RPE-204ENST00000411934 COG2Q14746 738 aa9.67□□□□□ -0.86
RPE-204ENST00000411934 ZYXQ15942 572 aaKnown RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms