RNA–Protein interactions for RNA: ENST00000409946.5

LRPPRC-203, Transcript of leucine rich pentatricopeptide repeat containing, humanhuman

TSL 1 (best) BASIC

Gene LRPPRC, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPPRC-203ENST00000409946 NOVP48745 357 aa20.31■□□□□ 0.84
LRPPRC-203ENST00000409946 DIS3L2Q8IYB7 885 aaKnown RBP20.31■□□□□ 0.84
LRPPRC-203ENST00000409946 LRRC47Q8N1G4 583 aaKnown RBP20.31■□□□□ 0.84
LRPPRC-203ENST00000409946 MTMR4Q9NYA4 1195 aa20.31■□□□□ 0.84
LRPPRC-203ENST00000409946 PI4KBQ9UBF8 816 aa20.31■□□□□ 0.84
LRPPRC-203ENST00000409946 RCOR1Q9UKL0 485 aa20.31■□□□□ 0.84
LRPPRC-203ENST00000409946 VEGFAP15692 232 aaPredicted RBP20.3■□□□□ 0.84
LRPPRC-203ENST00000409946 U2AF2P26368 475 aaKnown RBP eCLIP20.3■□□□□ 0.842e-6■■■□□ 18.3
LRPPRC-203ENST00000409946 AGBL3Q8NEM8 1001 aa20.3■□□□□ 0.84
LRPPRC-203ENST00000409946 OXER1Q8TDS5 423 aa20.3■□□□□ 0.84
LRPPRC-203ENST00000409946 MAP3K14Q99558 947 aa20.3■□□□□ 0.84
LRPPRC-203ENST00000409946 CPVLQ9H3G5 476 aa20.3■□□□□ 0.84
LRPPRC-203ENST00000409946 ZNF70Q9UC06 446 aaPredicted RBP20.3■□□□□ 0.84
LRPPRC-203ENST00000409946 ENTPD3O75355 529 aa20.3■□□□□ 0.84
LRPPRC-203ENST00000409946 NR5A1Q13285 461 aa20.3■□□□□ 0.84
LRPPRC-203ENST00000409946 ATL3Q6DD88 541 aa20.3■□□□□ 0.84
LRPPRC-203ENST00000409946 ATRNL1Q5VV63 1379 aa20.29■□□□□ 0.84
LRPPRC-203ENST00000409946 GOLGA6L4A6NEF3 574 aa20.29■□□□□ 0.84
LRPPRC-203ENST00000409946 USP17L2Q6R6M4 530 aa20.29■□□□□ 0.84
LRPPRC-203ENST00000409946 RTEL1Q9NZ71 1219 aa20.29■□□□□ 0.84
LRPPRC-203ENST00000409946 TMOD2Q9NZR1 351 aa20.29■□□□□ 0.84
LRPPRC-203ENST00000409946 PALM3A6NDB9 673 aaPredicted RBP20.28■□□□□ 0.84
LRPPRC-203ENST00000409946 CYTH3O43739 400 aa20.28■□□□□ 0.84
LRPPRC-203ENST00000409946 SAFBQ15424 915 aaKnown RBP eCLIP20.28■□□□□ 0.84
LRPPRC-203ENST00000409946 SYAP1Q96A49 352 aaPredicted RBP20.28■□□□□ 0.84
LRPPRC-203ENST00000409946 CLIP2Q9UDT6 1046 aa20.28■□□□□ 0.84
LRPPRC-203ENST00000409946 LTBP3Q9NS15 1303 aa20.28■□□□□ 0.84
LRPPRC-203ENST00000409946 USP17L5A8MUK1 530 aa20.27■□□□□ 0.84
LRPPRC-203ENST00000409946 SCG2P13521 617 aa20.27■□□□□ 0.84
LRPPRC-203ENST00000409946 SPDYE2Q495Y8 402 aa20.27■□□□□ 0.84
LRPPRC-203ENST00000409946 CCDC183Q5T5S1 534 aa20.27■□□□□ 0.84
LRPPRC-203ENST00000409946 LINC00301Q8NCQ3 95 aa20.27■□□□□ 0.84
LRPPRC-203ENST00000409946 BICD2Q8TD16 824 aa20.27■□□□□ 0.84
LRPPRC-203ENST00000409946 PHF20Q9BVI0 1012 aa20.27■□□□□ 0.84
LRPPRC-203ENST00000409946 TRIM34Q9BYJ4 488 aa20.27■□□□□ 0.84
LRPPRC-203ENST00000409946 VEZTQ9HBM0 779 aa20.27■□□□□ 0.84
LRPPRC-203ENST00000409946 COL2A1P02458 1487 aaPredicted RBP20.27■□□□□ 0.84
LRPPRC-203ENST00000409946 CNTNAP1P78357 1384 aa20.27■□□□□ 0.84
LRPPRC-203ENST00000409946 STK38Q15208 465 aa20.27■□□□□ 0.84
LRPPRC-203ENST00000409946 PFKFB3Q16875 520 aaPredicted RBP20.27■□□□□ 0.84
LRPPRC-203ENST00000409946 ANO1Q5XXA6 986 aa20.27■□□□□ 0.84
LRPPRC-203ENST00000409946 NOSTRINQ8IVI9 506 aa20.27■□□□□ 0.84
LRPPRC-203ENST00000409946 GPKOWQ92917 476 aaPredicted RBP eCLIP20.27■□□□□ 0.843e-6■■□□□ 11.9
LRPPRC-203ENST00000409946 CSRNP1Q96S65 589 aa20.27■□□□□ 0.84
LRPPRC-203ENST00000409946 RTN4Q9NQC3 1192 aaKnown RBP20.27■□□□□ 0.84
LRPPRC-203ENST00000409946 POLR3EQ9NVU0 708 aa20.27■□□□□ 0.84
LRPPRC-203ENST00000409946 FRMPD2Q68DX3 1309 aaPredicted RBP20.26■□□□□ 0.83
LRPPRC-203ENST00000409946 KLRF2D3W0D1 207 aa20.26■□□□□ 0.83
LRPPRC-203ENST00000409946 GDF11O95390 407 aa20.26■□□□□ 0.83
LRPPRC-203ENST00000409946 TTLL1O95922 423 aa20.26■□□□□ 0.83
LRPPRC-203ENST00000409946 PARP1P09874 1014 aaKnown RBP20.26■□□□□ 0.83
LRPPRC-203ENST00000409946 NASPP49321 788 aaPredicted RBP20.26■□□□□ 0.83
LRPPRC-203ENST00000409946 ATP2B2Q01814 1243 aa20.26■□□□□ 0.83
LRPPRC-203ENST00000409946 CERKLQ49MI3 558 aaPredicted RBP20.26■□□□□ 0.83
LRPPRC-203ENST00000409946 FAM205CA6NFA0 338 aa20.25■□□□□ 0.83
LRPPRC-203ENST00000409946 PDHBP11177 359 aa20.25■□□□□ 0.83
LRPPRC-203ENST00000409946 XBP1P17861 261 aa20.25■□□□□ 0.83
LRPPRC-203ENST00000409946 ME1P48163 572 aa20.25■□□□□ 0.83
LRPPRC-203ENST00000409946 GNAQP50148 359 aa20.25■□□□□ 0.83
LRPPRC-203ENST00000409946 TNIP1Q15025 636 aa20.25■□□□□ 0.83
LRPPRC-203ENST00000409946 SF3A1Q15459 793 aaKnown RBP20.25■□□□□ 0.83
LRPPRC-203ENST00000409946 NBPF9Q3BBW0 867 aa20.25■□□□□ 0.83
LRPPRC-203ENST00000409946 FOXP4Q8IVH2 680 aaPredicted RBP20.25■□□□□ 0.83
LRPPRC-203ENST00000409946 CDAN1Q8IWY9 1227 aa20.25■□□□□ 0.83
LRPPRC-203ENST00000409946 FOXP1Q9H334 677 aaPredicted RBP20.25■□□□□ 0.83
LRPPRC-203ENST00000409946 SPON1Q9HCB6 807 aa20.25■□□□□ 0.83
LRPPRC-203ENST00000409946 DICER1Q9UPY3 1922 aaKnown RBP20.25■□□□□ 0.83
LRPPRC-203ENST00000409946 ADAMTS3O15072 1205 aa20.25■□□□□ 0.83
LRPPRC-203ENST00000409946 YEATS4O95619 227 aa20.25■□□□□ 0.83
LRPPRC-203ENST00000409946 EGFRP00533 1210 aa20.25■□□□□ 0.83
LRPPRC-203ENST00000409946 RRP1BQ14684 758 aaKnown RBP20.25■□□□□ 0.83
LRPPRC-203ENST00000409946 NPY5RQ15761 445 aa20.25■□□□□ 0.83
LRPPRC-203ENST00000409946 TATDN1Q6P1N9 297 aa20.25■□□□□ 0.83
LRPPRC-203ENST00000409946 MTMR14Q8NCE2 650 aa20.25■□□□□ 0.83
LRPPRC-203ENST00000409946 CCDC17Q96LX7 622 aa20.25■□□□□ 0.83
LRPPRC-203ENST00000409946 MYOZ2Q9NPC6 264 aa20.25■□□□□ 0.83
LRPPRC-203ENST00000409946 PCDHA7Q9UN72 937 aa20.25■□□□□ 0.83
LRPPRC-203ENST00000409946 SCAF8Q9UPN6 1271 aaKnown RBP20.25■□□□□ 0.83
LRPPRC-203ENST00000409946 SBF1O95248 1867 aa20.24■□□□□ 0.83
LRPPRC-203ENST00000409946 WNT10BO00744 389 aa20.24■□□□□ 0.83
LRPPRC-203ENST00000409946 KRT2P35908 639 aa20.24■□□□□ 0.83
LRPPRC-203ENST00000409946 JAG1P78504 1218 aa20.24■□□□□ 0.83
LRPPRC-203ENST00000409946 NOM1Q5C9Z4 860 aaKnown RBP20.24■□□□□ 0.83
LRPPRC-203ENST00000409946 ZBED3Q96IU2 234 aaPredicted RBP20.24■□□□□ 0.83
LRPPRC-203ENST00000409946 GOLPH3LQ9H4A5 285 aa20.24■□□□□ 0.83
LRPPRC-203ENST00000409946 DACT1Q9NYF0 836 aa20.24■□□□□ 0.83
LRPPRC-203ENST00000409946 GJA3Q9Y6H8 435 aa20.24■□□□□ 0.83
LRPPRC-203ENST00000409946 SPTLC2O15270 562 aa20.23■□□□□ 0.83
LRPPRC-203ENST00000409946 NR1I2O75469 434 aa20.23■□□□□ 0.83
LRPPRC-203ENST00000409946 TOB1P50616 345 aaPredicted RBP20.23■□□□□ 0.83
LRPPRC-203ENST00000409946 SEPT2Q15019 361 aa20.23■□□□□ 0.83
LRPPRC-203ENST00000409946 EARS2Q5JPH6 523 aaKnown RBP20.23■□□□□ 0.83
LRPPRC-203ENST00000409946 RBM26Q5T8P6 1007 aaKnown RBP20.23■□□□□ 0.83
LRPPRC-203ENST00000409946 LRSAM1Q6UWE0 723 aa20.23■□□□□ 0.83
LRPPRC-203ENST00000409946 METTL16Q86W50 562 aaKnown RBP20.23■□□□□ 0.83
LRPPRC-203ENST00000409946 FAM151AQ8WW52 585 aa20.23■□□□□ 0.83
LRPPRC-203ENST00000409946 UBA5Q9GZZ9 404 aa20.23■□□□□ 0.83
LRPPRC-203ENST00000409946 ZNF541Q9H0D2 1346 aa20.23■□□□□ 0.83
LRPPRC-203ENST00000409946 TYW1BQ6NUM6 668 aa20.23■□□□□ 0.83
LRPPRC-203ENST00000409946 CCAR1Q8IX12 1150 aaKnown RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms