RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 FOXD4L6Q3SYB3 417 aaPredicted RBP6.39□□□□□ -1.39
EPHA4-202ENST00000409854 OTUD7BQ6GQQ9 843 aa6.39□□□□□ -1.39
EPHA4-202ENST00000409854 FOXD4L3Q6VB84 417 aaPredicted RBP6.39□□□□□ -1.39
EPHA4-202ENST00000409854 CMTR1Q8N1G2 835 aaKnown RBP6.39□□□□□ -1.39
EPHA4-202ENST00000409854 LZTS2Q9BRK4 669 aa6.39□□□□□ -1.39
EPHA4-202ENST00000409854 HERC5Q9UII4 1024 aaKnown RBP6.39□□□□□ -1.39
EPHA4-202ENST00000409854 ZNF541Q9H0D2 1346 aa6.39□□□□□ -1.39
EPHA4-202ENST00000409854 BAZ2BQ9UIF8 2168 aaKnown RBP6.39□□□□□ -1.39
EPHA4-202ENST00000409854 FIBPO43427 364 aa6.39□□□□□ -1.39
EPHA4-202ENST00000409854 TBC1D12O60347 775 aa6.39□□□□□ -1.39
EPHA4-202ENST00000409854 GADD45BO75293 160 aaPredicted RBP6.39□□□□□ -1.39
EPHA4-202ENST00000409854 TTLL1O95922 423 aa6.39□□□□□ -1.39
EPHA4-202ENST00000409854 EIF6P56537 245 aaKnown RBP6.39□□□□□ -1.39
EPHA4-202ENST00000409854 MAP3K10Q02779 954 aa6.39□□□□□ -1.39
EPHA4-202ENST00000409854 SLC35G1Q2M3R5 365 aa6.39□□□□□ -1.39
EPHA4-202ENST00000409854 FAM177A1Q8N128 213 aaPredicted RBP6.39□□□□□ -1.39
EPHA4-202ENST00000409854 LEO1Q8WVC0 666 aaPredicted RBP6.39□□□□□ -1.39
EPHA4-202ENST00000409854 MKL1Q969V6 931 aa6.39□□□□□ -1.39
EPHA4-202ENST00000409854 PHF20Q9BVI0 1012 aa6.39□□□□□ -1.39
EPHA4-202ENST00000409854 SPZ1Q9BXG8 430 aa6.39□□□□□ -1.39
EPHA4-202ENST00000409854 CFAP45Q9UL16 551 aa6.39□□□□□ -1.39
EPHA4-202ENST00000409854 STX8Q9UNK0 236 aa6.39□□□□□ -1.39
EPHA4-202ENST00000409854 SHTN1A0MZ66 631 aa6.38□□□□□ -1.39
EPHA4-202ENST00000409854 TRIM29Q14134 588 aa6.38□□□□□ -1.39
EPHA4-202ENST00000409854 GSE1Q14687 1217 aa6.38□□□□□ -1.39
EPHA4-202ENST00000409854 PFKFB3Q16875 520 aaPredicted RBP6.38□□□□□ -1.39
EPHA4-202ENST00000409854 MYSM1Q5VVJ2 828 aa6.38□□□□□ -1.39
EPHA4-202ENST00000409854 STAG2Q8N3U4 1231 aa6.38□□□□□ -1.39
EPHA4-202ENST00000409854 ZNF396Q96N95 335 aaPredicted RBP6.38□□□□□ -1.39
EPHA4-202ENST00000409854 NYAP2Q9P242 653 aa6.38□□□□□ -1.39
EPHA4-202ENST00000409854 RCOR1Q9UKL0 485 aa6.38□□□□□ -1.39
EPHA4-202ENST00000409854 POLR2AP24928 1970 aaKnown RBP6.38□□□□□ -1.39
EPHA4-202ENST00000409854 CLRN2A0PK11 232 aa6.38□□□□□ -1.39
EPHA4-202ENST00000409854 TCP10L2B9ZVM9 353 aa6.38□□□□□ -1.39
EPHA4-202ENST00000409854 MYO1BO43795 1136 aa6.38□□□□□ -1.39
EPHA4-202ENST00000409854 SLURP2P0DP57 97 aa6.38□□□□□ -1.39
EPHA4-202ENST00000409854 PDHBP11177 359 aa6.38□□□□□ -1.39
EPHA4-202ENST00000409854 LMNB1P20700 586 aa6.38□□□□□ -1.39
EPHA4-202ENST00000409854 NASPP49321 788 aaPredicted RBP6.38□□□□□ -1.39
EPHA4-202ENST00000409854 GMPSP49915 693 aaPredicted RBP6.38□□□□□ -1.39
EPHA4-202ENST00000409854 CERKLQ49MI3 558 aaPredicted RBP6.38□□□□□ -1.39
EPHA4-202ENST00000409854 USP28Q96RU2 1077 aa6.38□□□□□ -1.39
EPHA4-202ENST00000409854 CSRNP1Q96S65 589 aa6.38□□□□□ -1.39
EPHA4-202ENST00000409854 FOXP1Q9H334 677 aaPredicted RBP6.38□□□□□ -1.39
EPHA4-202ENST00000409854 POLR3EQ9NVU0 708 aa6.38□□□□□ -1.39
EPHA4-202ENST00000409854 RTEL1Q9NZ71 1219 aa6.38□□□□□ -1.39
EPHA4-202ENST00000409854 SYNPO2Q9UMS6 1093 aa6.38□□□□□ -1.39
EPHA4-202ENST00000409854 CYTH3O43739 400 aa6.38□□□□□ -1.39
EPHA4-202ENST00000409854 SCG2P13521 617 aa6.38□□□□□ -1.39
EPHA4-202ENST00000409854 NCLP19338 710 aaKnown RBP6.38□□□□□ -1.39
EPHA4-202ENST00000409854 NPY5RQ15761 445 aa6.38□□□□□ -1.39
EPHA4-202ENST00000409854 NBPF9Q3BBW0 867 aa6.38□□□□□ -1.39
EPHA4-202ENST00000409854 ASPRV1Q53RT3 343 aa6.38□□□□□ -1.39
EPHA4-202ENST00000409854 TMEM179Q6ZVK1 233 aa6.38□□□□□ -1.39
EPHA4-202ENST00000409854 ILDR2Q71H61 639 aa6.38□□□□□ -1.39
EPHA4-202ENST00000409854 ZSCAN29Q8IWY8 852 aaPredicted RBP6.38□□□□□ -1.39
EPHA4-202ENST00000409854 SPATA32Q96LK8 384 aa6.38□□□□□ -1.39
EPHA4-202ENST00000409854 SYT17Q9BSW7 474 aa6.38□□□□□ -1.39
EPHA4-202ENST00000409854 SH3GLB2Q9NR46 395 aa6.38□□□□□ -1.39
EPHA4-202ENST00000409854 V9GY48 417 aaPredicted RBP6.38□□□□□ -1.39
EPHA4-202ENST00000409854 OTOFQ9HC10 1997 aa6.38□□□□□ -1.39
EPHA4-202ENST00000409854 WDR90Q96KV7 1748 aa6.38□□□□□ -1.39
EPHA4-202ENST00000409854 SCN4AP35499 1836 aa6.37□□□□□ -1.39
EPHA4-202ENST00000409854 FAM196BA6NMK8 535 aa6.37□□□□□ -1.39
EPHA4-202ENST00000409854 PARP1P09874 1014 aaKnown RBP6.37□□□□□ -1.39
EPHA4-202ENST00000409854 AKAP17AQ02040 695 aaKnown RBP6.37□□□□□ -1.39
EPHA4-202ENST00000409854 RRP1BQ14684 758 aaKnown RBP6.37□□□□□ -1.39
EPHA4-202ENST00000409854 MICALL2Q8IY33 904 aa6.37□□□□□ -1.39
EPHA4-202ENST00000409854 GPC2Q8N158 579 aa6.37□□□□□ -1.39
EPHA4-202ENST00000409854 CCDC82Q8N4S0 544 aa6.37□□□□□ -1.39
EPHA4-202ENST00000409854 TNFRSF25Q93038 417 aa6.37□□□□□ -1.39
EPHA4-202ENST00000409854 KANSL2Q9H9L4 492 aa6.37□□□□□ -1.39
EPHA4-202ENST00000409854 TFIP11Q9UBB9 837 aaKnown RBP6.37□□□□□ -1.39
EPHA4-202ENST00000409854 RBBP6Q7Z6E9 1792 aaKnown RBP6.37□□□□□ -1.39
EPHA4-202ENST00000409854 RRP9O43818 475 aaKnown RBP6.37□□□□□ -1.39
EPHA4-202ENST00000409854 YEATS4O95619 227 aa6.37□□□□□ -1.39
EPHA4-202ENST00000409854 EGFRP00533 1210 aa6.37□□□□□ -1.39
EPHA4-202ENST00000409854 XBP1P17861 261 aa6.37□□□□□ -1.39
EPHA4-202ENST00000409854 RASGRP2Q7LDG7 609 aa6.37□□□□□ -1.39
EPHA4-202ENST00000409854 CLEC10AQ8IUN9 316 aa6.37□□□□□ -1.39
EPHA4-202ENST00000409854 SIAH1Q8IUQ4 282 aa6.37□□□□□ -1.39
EPHA4-202ENST00000409854 NOSTRINQ8IVI9 506 aa6.37□□□□□ -1.39
EPHA4-202ENST00000409854 DIS3L2Q8IYB7 885 aaKnown RBP6.37□□□□□ -1.39
EPHA4-202ENST00000409854 TEPSINQ96N21 525 aa6.37□□□□□ -1.39
EPHA4-202ENST00000409854 TRIM34Q9BYJ4 488 aa6.37□□□□□ -1.39
EPHA4-202ENST00000409854 RIOX1Q9H6W3 641 aa6.37□□□□□ -1.39
EPHA4-202ENST00000409854 TMEM63CQ9P1W3 806 aa6.37□□□□□ -1.39
EPHA4-202ENST00000409854 CNOT7Q9UIV1 285 aaKnown RBP6.37□□□□□ -1.39
EPHA4-202ENST00000409854 MORC2Q9Y6X9 1032 aaPredicted RBP6.37□□□□□ -1.39
EPHA4-202ENST00000409854 USP17L5A8MUK1 530 aa6.37□□□□□ -1.39
EPHA4-202ENST00000409854 KLRF2D3W0D1 207 aa6.37□□□□□ -1.39
EPHA4-202ENST00000409854 JAG1P78504 1218 aa6.37□□□□□ -1.39
EPHA4-202ENST00000409854 ZNF543Q08ER8 600 aa6.37□□□□□ -1.39
EPHA4-202ENST00000409854 ABCB5Q2M3G0 1257 aa6.37□□□□□ -1.39
EPHA4-202ENST00000409854 SHROOM1Q2M3G4 852 aaPredicted RBP6.37□□□□□ -1.39
EPHA4-202ENST00000409854 LINC00301Q8NCQ3 95 aa6.37□□□□□ -1.39
EPHA4-202ENST00000409854 GMCL1P1Q8NEA9 526 aa6.37□□□□□ -1.39
EPHA4-202ENST00000409854 PGBD1Q96JS3 809 aa6.37□□□□□ -1.39
EPHA4-202ENST00000409854 FTOQ9C0B1 505 aaKnown RBP eCLIP6.37□□□□□ -1.39
EPHA4-202ENST00000409854 VPS54Q9P1Q0 977 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms